Gene
| Gene Model ID | habu1_s5910_g16414 |
|---|---|
| Locus | habu1_scaffold5910 : 483892 ... 533885 : - |
| To GenomeBrowser | habu1_scaffold5910:483892..533885 |
| Genes list of scaffold | habu1_scaffold5910 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| pre-b cell leukemia transcription factor 4 | GO:0001741 GO:0003700 GO:0005634 GO:0005667 GO:0006355 GO:0043565 GO:0045449 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5910_g16414.t1 | 1 | 1 | PBC | 41 | 231 | 0.0 | 333.4 | 0.0 | 0.0 | 332.9 |
| habu1_s5910_g16414.t1 | 1 | 1 | Homeobox | 233 | 292 | 2.3e-18 | 65.5 | 3.0e-21 | 4.9e-18 | 64.5 |
| habu1_s5910_g16414.t1 | 1 | 1 | Homeobox_KN | 251 | 289 | 3.4e-15 | 55.4 | 1.4e-17 | 2.3e-14 | 52.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5910_g16414.t1 | gi|327277002|ref|XP_003223255.1| | PREDICTED: pre-B-cell leukemia transcription factor 4 [Anolis carolinensis] | 0.0 |
| habu1_s5910_g16414.t1 | gi|50795297|ref|XP_423764.1| | PREDICTED: pre-B-cell leukemia transcription factor 4 isoformX2 [Gallus gallus] | 0.0 |
| habu1_s5910_g16414.t1 | gi|641782711|ref|XP_008173805.1| | PREDICTED: pre-B-cell leukemia transcription factor 4 [Chrysemys picta bellii] | 0.0 |
| habu1_s5910_g16414.t1 | gi|729741705|ref|XP_010567137.1| | PREDICTED: pre-B-cell leukemia transcription factor 4 isoform X2 [Haliaeetus leucocephalus] | 0.0 |
| habu1_s5910_g16414.t1 | gi|612010355|ref|XP_007488655.1| | PREDICTED: pre-B-cell leukemia transcription factor 3-like isoform X1 [Monodelphis domestica] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.7 |
| Venom grand-1 | 6.9 |
| Pit, infrared sensing | 5.3 |
| Nose | 4.8 |
| Brain-1 | 3.2 |
| Eye | 4.0 |
| fetal fibroblast | 10.5 |
| venom gland-2 | 4.7 |
| Brain-2 | 3.1 |
| Spleen | 3.7 |
| Lung | 7.1 |
| Liver | 4.0 |
| Kidney | 6.3 |
| Pancreas | 4.5 |
| Small intestine | 3.5 |
| Large intestine | 5.0 |
| Stomach | 4.9 |
| heart | 5.5 |
| ovary | 13.5 |
| cheek muscle | 14.4 |
Transcript
| Transcript ID | habu1_s5910_g16414.t1 |
|---|---|
| Definition | - |
>habu1_s5910_g16414.t1 ggcgggggccgggggcggagcgggcgcgagtgaggagccgtggggcctgttctgtgtcagtcgtgtgtgtgtgtatatac gttgaggggggaaaaagagacggaggggctcgagcagctcccggaatccccctcccgccgcgcccgaggcggctccctcc ctttactgcccttttaccccccgcctctgacatggaagaggcatcccggctgctggcgggtctccctcctcctggggccg ccggagatccctcgccccacagacttcaagcgcctccaggcccaccccagccccaggcagcccccggacttcaggacacg ggtgacatcttgcagcagattatggccatcaccgatcagagcctggatgaagcacaggccaggaaacatgccttgaattg ccaccgaatgaaacctgctcttttcagtgtgctatgtgatattaaagaaaaaacagtgttaagtatacgtggtattcagg aagaagatccccctgatgctcagctaatgagactagataacatgttgctggctgagggtgtctccgggcccgagaagcgg ggaagaggaggaccagcggcaatagcagcaacatcaggtggctgtccaaatgacaatagcattgaacactctgactacag ggccaagctgtcacagatccgacagatataccactctgagctagagaaatatgaacaggcctgcagtgagttcaccactc atgttatgaacctccttcgggaacagagtagaacaaggccaatctcgcccaaagaaatagagcgtatggtgaatataatt catggaaaattcagcaccatacagatgcagctgaaacaaagtacgtgcgaggcagtgatgattttgcgttcgagatttct tgatgcaaggcgaaaacgacgtaacttcagcaagcaggcaacagaagtattgaatgaatatttttattctcatctgagta atccttaccccagtgaagaagccaaagaagaactagcaaagaaaggaggcattacggtctcacaggtctccaactggttt ggtaacaagagaatccgctacaagaaaaatatgggaaaattccaggaagaggccaatatttatgcagccaaaacagcagt ggatgctaccaatgtggtggctcaagggaaccaaacaagctctcccccaaccccaaattctggttcctctgggtcattta aaatgacaaattctggagattcctttataaacctgcagtcactcagttcttaccagaattcaccagtgggagccaatgtg caatctcagatggattccttacaccatgtcatacaccaggcaggaagatatgacagcattgtgggaaaccccctatattc gacacagcgcattgatgtaaggagcttctgattttgaaactgaatgtcttgagctgcggaagtctgacatggcagtgttg gttaatgtaaccacatctgcagatgcaattataacagaactctactgcggcattaactgtggtgttgctagcaccttgcc ataagactgctgcttcaaagagtgggggaaataggcatcctgttgccagtttttattattcagggaatttttaaaaatcc ctcatgcttaaactgtaaggaaatctgtctatgtatcattcacggtactgcgaagaaccatgaatggttagggatgatca gaaagagaagttggctcacctactcatccatattggcccagtgcattagaagaaagcatctttctatcccctcccattgg aggagagtgctcccagttgaaagaagagactgcaggagagagtgaaagagagacagcaaaagcatgggcagtcaactagc ctccagtgaaatccacacactggccttggattggttcttatccccaagtctgcatttgggaacagaaaaatatgtgggag tgtattcttccatcctgtactctgaattctttgaattgtttgagaattaacagggagtaaagctttaactatttagacaa att |
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Protein
| Protein ID | habu1_s5910_g16414.t1 |
|---|---|
| Definition | - |
>habu1_s5910_g16414.t1 MEEASRLLAGLPPPGAAGDPSPHRLQAPPGPPQPQAAPGLQDTGDILQQIMAITDQSLDEAQARKHALNCHRMKPALFSV LCDIKEKTVLSIRGIQEEDPPDAQLMRLDNMLLAEGVSGPEKRGRGGPAAIAATSGGCPNDNSIEHSDYRAKLSQIRQIY HSELEKYEQACSEFTTHVMNLLREQSRTRPISPKEIERMVNIIHGKFSTIQMQLKQSTCEAVMILRSRFLDARRKRRNFS KQATEVLNEYFYSHLSNPYPSEEAKEELAKKGGITVSQVSNWFGNKRIRYKKNMGKFQEEANIYAAKTAVDATNVVAQGN QTSSPPTPNSGSSGSFKMTNSGDSFINLQSLSSYQNSPVGANVQSQMDSLHHVIHQAGRYDSIVGNPLYSTQRIDVRSF |
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