Gene
Gene Model ID | habu1_s5910_g16422 |
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Locus | habu1_scaffold5910 : 815246 ... 822397 : + |
To GenomeBrowser | habu1_scaffold5910:815246..822397 |
Genes list of scaffold | habu1_scaffold5910 |
Annotation by Blast2GO
Annotation | GO |
---|---|
oxidoreductase htatip2 | GO:0005635 GO:0005737 GO:0016020 GO:0045765 GO:0051170 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
habu1_s5910_g16422.t3 | 1 | 1 | Semialdhyde_dh | 14 | 94 | 2.6e-06 | 27.7 | 1.2e-09 | 4.4e-06 | 27.0 |
habu1_s5910_g16422.t3 | 1 | 1 | NAD_binding_10 | 16 | 207 | 5.1e-14 | 52.7 | 1.8e-17 | 6.8e-14 | 52.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
habu1_s5910_g16422.t3 | gi|148225370|ref|NP_001089518.1| | HIV-1 Tat interactive protein 2, 30kDa [Xenopus laevis] | 0.0 |
habu1_s5910_g16422.t3 | gi|18859483|ref|NP_571756.1| | oxidoreductase HTATIP2 [Danio rerio] | 0.0 |
Expression profile
Libraries | FPKM |
---|---|
>Adult | |
Venom fang forming tissue | 19.6 |
Venom grand-1 | 22.4 |
Pit, infrared sensing | 23.6 |
Nose | 16.5 |
Brain-1 | 2.0 |
Eye | 11.2 |
fetal fibroblast | 24.3 |
venom gland-2 | 34.0 |
Brain-2 | 2.5 |
Spleen | 9.2 |
Lung | 11.8 |
Liver | 17.3 |
Kidney | 21.1 |
Pancreas | 17.2 |
Small intestine | 28.4 |
Large intestine | 15.0 |
Stomach | 12.2 |
heart | 19.4 |
ovary | 42.8 |
cheek muscle | 22.2 |
Transcript
Transcript ID | habu1_s5910_g16422.t1 |
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Definition | - |
>habu1_s5910_g16422.t1 cgttctctctcttgctctctgtcagggcttctctccgagacttcgtggcagttgagcgattgacgcttcctccgctggga cagcagtgggtggccagtccagacgcctgaaatgcaactggagcctggcacgtaaaccagtatggcggttcccagttcag aagaacagaagaaacaaaactgtttcatcttgggtgcgtctggagaaactgggaaagtattgctacttgaaatcttaaag acgcaaaaattctctcatgtgaccctcattggccgccgaaagctaaatttagaagggactctttacagtaatgtggtcca agaagttgttgactttgagaagctagatgaatctgctgctgccttccaaggacatgacgtaggattttgctgcttgggga caagcagagccaaagctggagcggatggatttgtgcttgttgaccgtgattatgttgaacatgcagcaaagctagccaaa gccggtggctgccaccactttattctagagtcaagcaaaggtgcagatagctccagcagattcctctatctgaagaccaa ggagagagagctcaaccaatggaggttgtcttattccttccctctttagggtgaagtagaaaacaggcttaaggcacttg gatttgacagattctccatatttagaccagcggtgctgctatgcgatcgccaggaatctcgacccggtgaatggatggcc aggaaagccctaggagtggtagcccatttctttcccacgtatatgtctatccctgtcacaacagtggccagagcaatggc caatcttgcagtgatgccagcaaaagatgggcagaaagtggaggtgctggaaaatgcagccatccatgcccttggtcagc caaagtaatcaacagagaagaagggatgtttcttggatagctttataatgaagtggtttcattgattccccaaagcccag ctttacttgcagtttttttatactgcagagggtctttgaataataagtacctatgaattgcatttgaattgcatttgata gggttgttgcatcaggagcatgtgatcctgaaataactaaaaaaaaaaaaagccttaatgtcattggtgctctttcaaaa gctttaaatgcggatcctgcctcttaataaaattaattaattagctatggaat |
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Transcript ID | habu1_s5910_g16422.t2 |
Definition | - |
>habu1_s5910_g16422.t2 cgttctctctcttgctctctgtcagggcttctctccgagacttcgtggcagttgagcgattgacgcttcctccgctggga cagcagtgggtggccagtccagacgcctgaaatgcaactggagcctggcacgtaaaccagtatggcggttcccagttcag aagaacagaagaaacaaaactgtttcatcttgggtgcgtctggagaaactgggaaagtattgctacttgaaatcttaaag acgcaaaaattctctcatgtgaccctcattggccgccgaaagctaaatttagaagggactctttacagtaatgtggtcca agaagttgttgactttgagaagctagatgaatctgctgctgccttccaaggacatgacgtaggattttgctgcttgggga caagcagagccaaagctggagcggatggatttgtgcttgttgaccgtgattatgttgaacatgcagcaaagctagccaaa gccggtggctgccaccactttattctagagtcaagcaaaggtgcagatagctccagcagattcctctatctgaagaccaa gcttccgtgtgtttctctgtacaggagagagagctcaaccaatggaggttgtcttattccttccctctttagggtgaagt agaaaacaggcttaaggcacttggatttgacagattctccatatttagaccagcggtgctgctatgcgatcgccaggaat ctcgacccggtgaatggatggccaggaaagccctaggagtggtagcccatttctttcccacgtatatgtctatccctgtc acaacagtggccagagcaatggccaatcttgcagtgatgccagcaaaagatgggcagaaagtggaggtgctggaaaatgc agccatccatgcccttggtcagccaaagtaatcaacagagaagaagggatgtttcttggatagctttataatgaagtggt ttcattgattccccaaagcccagctttacttgcagtttttttatactgcagagggtctttgaataataagtacctatgaa ttgcatttgaattgcatttgatagggttgttgcatcaggagcatgtgatcctgaaataactaaaaaaaaaaaaagcctta atgtcattggtgctctttcaaaagctttaaatgcggatcctgcctcttaataaaattaattaattagctatggaat |
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Transcript ID | habu1_s5910_g16422.t3 |
Definition | - |
>habu1_s5910_g16422.t3 cgttctctctcttgctctctgtcagggcttctctccgagacttcgtggcagttgagcgattgacgcttcctccgctggga cagcagtgggtggccagtccagacgcctgaaatgcaactggagcctggcacgtaaaccagtatggcggttcccagttcag aagaacagaagaaacaaaactgtttcatcttgggtgcgtctggagaaactgggaaagtattgctacttgaaatcttaaag acgcaaaaattctctcatgtgaccctcattggccgccgaaagctaaatttagaagggactctttacagtaatgtggtcca agaagttgttgactttgagaagctagatgaatctgctgctgccttccaaggacatgacgtaggattttgctgcttgggga caagcagagccaaagctggagcggatggatttgtgcttgttgaccgtgattatgttgaacatgcagcaaagctagccaaa gccggtggctgccaccactttattctagagtcaagcaaaggtgcagatagctccagcagattcctctatctgaagaccaa gggtgaagtagaaaacaggcttaaggcacttggatttgacagattctccatatttagaccagcggtgctgctatgcgatc gccaggaatctcgacccggtgaatggatggccaggaaagccctaggagtggtagcccatttctttcccacgtatatgtct atccctgtcacaacagtggccagagcaatggccaatcttgcagtgatgccagcaaaagatgggcagaaagtggaggtgct ggaaaatgcagccatccatgcccttggtcagccaaagtaatcaacagagaagaagggatgtttcttggatagctttataa tgaagtggtttcattgattccccaaagcccagctttacttgcagtttttttatactgcagagggtctttgaataataagt acctatgaattgcatttgaattgcatttgatagggttgttgcatcaggagcatgtgatcctgaaataactaaaaaaaaaa aaagccttaatgtcattggtgctctttcaaaagctttaaatgcggatcctgcctcttaataaaattaattaattagctat ggaat |
Protein
Protein ID | habu1_s5910_g16422.t1 |
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Definition | - |
>habu1_s5910_g16422.t1 MAVPSSEEQKKQNCFILGASGETGKVLLLEILKTQKFSHVTLIGRRKLNLEGTLYSNVVQEVVDFEKLDESAAAFQGHDV GFCCLGTSRAKAGADGFVLVDRDYVEHAAKLAKAGGCHHFILESSKGADSSSRFLYLKTKERELNQWRLSYSFPL |
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Protein ID | habu1_s5910_g16422.t2 |
Definition | - |
>habu1_s5910_g16422.t2 MAVPSSEEQKKQNCFILGASGETGKVLLLEILKTQKFSHVTLIGRRKLNLEGTLYSNVVQEVVDFEKLDESAAAFQGHDV GFCCLGTSRAKAGADGFVLVDRDYVEHAAKLAKAGGCHHFILESSKGADSSSRFLYLKTKLPCVSLYRRESSTNGGCLIP SLFRVK |
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Protein ID | habu1_s5910_g16422.t3 |
Definition | - |
>habu1_s5910_g16422.t3 MAVPSSEEQKKQNCFILGASGETGKVLLLEILKTQKFSHVTLIGRRKLNLEGTLYSNVVQEVVDFEKLDESAAAFQGHDV GFCCLGTSRAKAGADGFVLVDRDYVEHAAKLAKAGGCHHFILESSKGADSSSRFLYLKTKGEVENRLKALGFDRFSIFRP AVLLCDRQESRPGEWMARKALGVVAHFFPTYMSIPVTTVARAMANLAVMPAKDGQKVEVLENAAIHALGQPK |