Gene
| Gene Model ID | habu1_s5910_g16426 |
|---|---|
| Locus | habu1_scaffold5910 : 864278 ... 872825 : - |
| To GenomeBrowser | habu1_scaffold5910:864278..872825 |
| Genes list of scaffold | habu1_scaffold5910 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5910_g16426.t1 | 1 | 1 | 7TM_GPCR_Srsx | 37 | 215 | 9.5e-10 | 38.0 | 4.7e-13 | 1.4e-09 | 37.5 |
| habu1_s5910_g16426.t1 | 1 | 1 | 7tm_1 | 42 | 290 | 1.7e-29 | 102.7 | 7.5e-33 | 2.2e-29 | 102.3 |
| habu1_s5910_g16426.t1 | 1 | 1 | 7tm_4 | 141 | 283 | 1.19993e-41 | 141.8 | 4.2039e-45 | 1.19993e-41 | 141.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5910_g16426.t1 | gi|602674218|ref|XP_007442601.1| | PREDICTED: olfactory receptor 13H1-like [Python bivittatus] | 0.0 |
| habu1_s5910_g16426.t1 | gi|602677168|ref|XP_007444036.1| | PREDICTED: olfactory receptor 13H1-like [Python bivittatus] | 0.0 |
| habu1_s5910_g16426.t1 | gi|602652904|ref|XP_007445154.1| | PREDICTED: olfactory receptor 13H1-like [Python bivittatus] | 0.0 |
| habu1_s5910_g16426.t1 | gi|557258795|ref|XP_006015089.1| | PREDICTED: olfactory receptor 13H1-like [Alligator sinensis] | 0.0 |
| habu1_s5910_g16426.t1 | gi|564243373|ref|XP_006278468.1| | PREDICTED: olfactory receptor 13H1-like [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.0 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s5910_g16426.t1 |
|---|---|
| Definition | - |
>habu1_s5910_g16426.t1 gatgcctcacttgtggggtaccgcagggggcggtcctctcgcctctcctgttcaacatctatatgaagccactgggaaac atggaaaaatggggaaatgcaaccacagtgaccgaatttgtgcttgttgggctctctaaaaacttcaaagttcgtgctgg attgtttgtcctcttcttggttatctatctcattgctgtagccggcaatggtctcatgttggtgctgattatcatagatt ctcacctccacacacccatgtattttttcctcagcaacctctcctttattgacatcagctatatcaccacctctgtccca cagatgctggtccactgcttcatggacagacctactatcccatggggcagatgttttgctcagatgagcatcagcggctt attagctatcactgaatctgttttgttagctatgatggcttatgaccgttttgtggcaatatgctaccctctgcgctaca accagatcatgagtcgcaatgtatgcatccagctggctgtgaccctgtgggccagcaccttcattattactattgtcccc tttttcagcatgcaggcaactttgtgtgggccaaatgtggtgaatcatttcaagtgtgaactgcaggcagtgttgaaact ggcttgctctgatacccgtgccagtggaattaacatgataataaccagtgccattaccctagcattccccttcttcttta tcctggtgacctatggccgtattgggttcactattttgcgtatccattcggcccaaggtcggagcaaagccttgtccacc tgtggatctcatctcacagtagtgagcatatattatggcaccatcttggccatgtatttgaggcctcaagctaagacgtt ctcagatagggaaaaagtggtggcagtcttttatggagttgtgatccccatgttaaaccccatcatttacagcctgagga acagggatgtgaagggagccttctgcagactggctgggaagaaagtagaggactaaatcgcccaggaaccaggttgatag atcttccacaagcaagtcttttatatatatatatatggttttgtcattctataagagaggaccttgtgaagtggcattct ccaagtattgtcatatgtcacccacacttctctttccttattgctcatgctggctaaggctgaagaaggttgtggtagca gcagtctgaagatcaacccttgagagtcacttttgagctgtatagtcatcaaaacttctcagaactcttgacattgcaag aatatggcctccccaaaatgttctttctaccaggttcacctatttcttcagtatattggaataattacctggtaaactgc atactctatatctgtgttagctcagagatatatggtggtacaaggccacattgactaatggtgtcacccacaactgatgt gaagctccacctactatgatgcaaagatttgcatttttagaatgattaatttaacattttatgtccttacaaaaatgctc attttagttattactacattaaatgtaaaattaaaaaatacacct |
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Protein
| Protein ID | habu1_s5910_g16426.t1 |
|---|---|
| Definition | - |
>habu1_s5910_g16426.t1 MEKWGNATTVTEFVLVGLSKNFKVRAGLFVLFLVIYLIAVAGNGLMLVLIIIDSHLHTPMYFFLSNLSFIDISYITTSVP QMLVHCFMDRPTIPWGRCFAQMSISGLLAITESVLLAMMAYDRFVAICYPLRYNQIMSRNVCIQLAVTLWASTFIITIVP FFSMQATLCGPNVVNHFKCELQAVLKLACSDTRASGINMIITSAITLAFPFFFILVTYGRIGFTILRIHSAQGRSKALST CGSHLTVVSIYYGTILAMYLRPQAKTFSDREKVVAVFYGVVIPMLNPIIYSLRNRDVKGAFCRLAGKKVED |
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