Gene
| Gene Model ID | habu1_s5910_g16427 |
|---|---|
| Locus | habu1_scaffold5910 : 879011 ... 883795 : - |
| To GenomeBrowser | habu1_scaffold5910:879011..883795 |
| Genes list of scaffold | habu1_scaffold5910 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5910_g16427.t1 | 1 | 1 | 7TM_GPCR_Srsx | 37 | 195 | 2.7e-07 | 30.0 | 1.2e-10 | 3.7e-07 | 29.5 |
| habu1_s5910_g16427.t1 | 1 | 1 | 7tm_1 | 42 | 290 | 2.5e-32 | 112.0 | 1.1e-35 | 3.2e-32 | 111.6 |
| habu1_s5910_g16427.t1 | 1 | 1 | 7tm_4 | 141 | 283 | 1.68156e-44 | 151.1 | 0.0 | 1.68156e-44 | 151.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5910_g16427.t1 | gi|557258789|ref|XP_006015086.1| | PREDICTED: olfactory receptor 13H1-like [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 1.9 |
| Brain-1 | 0.0 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s5910_g16427.t1 |
|---|---|
| Definition | - |
>habu1_s5910_g16427.t1 gggaggaggcggggctggggcaacgatgatgtcagtagataatacttggtagatagaatctgtacaaaaacctatcattt tcaggattatattatatcatgctggaaggactttctgaaagtctgcctttagggcatttaggttatcaggataaaaaaag gaaaataccaaaataagaaactacctattgatcaacaagattaattataagaggtgacatggaaaaatggggaaatgcaa ccacagtgaccgaatttgtgcttgttgggctctctaaaaacttcaaagttcgtgctggattgtttgtcctcttcttgatt atctatctcattgctgtagccggcaatggcctcatattggtgctgattgtcatagattctcacctccacacacccatgta ttttttcctcagcaacctctcctttattgacatcagctatatcaccacctctgtcccacagatgctggtccactgcttca tggacagacctactatcccatggggcagatgttttgctcagatgtgtagtgctctcattttagctgtggtggagtgtctt ttgttagctgtgatggcttatgaccgttttgtggcaatatgttaccctctgcgctacaaccagatcatgagtcgcaattt atgcatccagctggctgtgagtgtgtgggtcagcgccttccttttgactattataccctttttcaccatgcaggcaactt tgtgtgggccaaatgtggtgaatcatttcaagtgtgaactgcaggcagttttgaaactgtcttgctctgacacccatgct aatggaattaccatgatgataaccagtgtctttaccctagcattccccttcttctttatcctggtgacctatggccgtat tggattcactgttttgcgtattcattctgcccaaggtcggagcaaagccttgtccacctgtggatctcatctcacggtag tgagcatatattatggcaccatcttggccatgtatttgaggcctcaagccaagacattctctgatagggaaaaagtggtg gcagtcttttatggagttgtgatccccatgttaaaccccatcatttacagcttgaggaacagggatgtgaagggagcctt ctgtagactggctgggaagaaagtagaggagtaaaccgcccaggaaccaggttgatagatcttccacaaggaagtctttt tttagatatggttttgtaattctataactgagcaccttgtgaagtgtcgttctccaagtattgtcatacatcacctctat ccccctttgtccatgctagctaaggctgatgagtatgaaatcattgaagaattgagctgaatgctactgtgcataattta atattacaggtatactcatgatcaatatggttttaagcacggagaaaaaatataaaatatcatcctataattatgataca atatttccagaaaaagaatagataagatcagtacaagatcaaacttcaagaaactgggtgcagctggattaatcacagaa gatcttaaagattaaagtacaaataaaaccagacatgt |
|
Protein
| Protein ID | habu1_s5910_g16427.t1 |
|---|---|
| Definition | - |
>habu1_s5910_g16427.t1 MEKWGNATTVTEFVLVGLSKNFKVRAGLFVLFLIIYLIAVAGNGLILVLIVIDSHLHTPMYFFLSNLSFIDISYITTSVP QMLVHCFMDRPTIPWGRCFAQMCSALILAVVECLLLAVMAYDRFVAICYPLRYNQIMSRNLCIQLAVSVWVSAFLLTIIP FFTMQATLCGPNVVNHFKCELQAVLKLSCSDTHANGITMMITSVFTLAFPFFFILVTYGRIGFTVLRIHSAQGRSKALST CGSHLTVVSIYYGTILAMYLRPQAKTFSDREKVVAVFYGVVIPMLNPIIYSLRNRDVKGAFCRLAGKKVEE |
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