Gene
Gene Model ID | habu1_s5910_g16427 |
---|---|
Locus | habu1_scaffold5910 : 879011 ... 883795 : - |
To GenomeBrowser | habu1_scaffold5910:879011..883795 |
Genes list of scaffold | habu1_scaffold5910 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
habu1_s5910_g16427.t1 | 1 | 1 | 7TM_GPCR_Srsx | 37 | 195 | 2.7e-07 | 30.0 | 1.2e-10 | 3.7e-07 | 29.5 |
habu1_s5910_g16427.t1 | 1 | 1 | 7tm_1 | 42 | 290 | 2.5e-32 | 112.0 | 1.1e-35 | 3.2e-32 | 111.6 |
habu1_s5910_g16427.t1 | 1 | 1 | 7tm_4 | 141 | 283 | 1.68156e-44 | 151.1 | 0.0 | 1.68156e-44 | 151.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
habu1_s5910_g16427.t1 | gi|557258789|ref|XP_006015086.1| | PREDICTED: olfactory receptor 13H1-like [Alligator sinensis] | 0.0 |
Expression profile
Libraries | FPKM |
---|---|
>Adult | |
Venom fang forming tissue | 0.0 |
Venom grand-1 | 0.0 |
Pit, infrared sensing | 0.0 |
Nose | 1.9 |
Brain-1 | 0.0 |
Eye | 0.0 |
fetal fibroblast | 0.0 |
venom gland-2 | 0.0 |
Brain-2 | 0.0 |
Spleen | 0.0 |
Lung | 0.0 |
Liver | 0.0 |
Kidney | 0.0 |
Pancreas | 0.0 |
Small intestine | 0.0 |
Large intestine | 0.0 |
Stomach | 0.0 |
heart | 0.0 |
ovary | 0.0 |
cheek muscle | 0.0 |
Transcript
Transcript ID | habu1_s5910_g16427.t1 |
---|---|
Definition | - |
>habu1_s5910_g16427.t1 gggaggaggcggggctggggcaacgatgatgtcagtagataatacttggtagatagaatctgtacaaaaacctatcattt tcaggattatattatatcatgctggaaggactttctgaaagtctgcctttagggcatttaggttatcaggataaaaaaag gaaaataccaaaataagaaactacctattgatcaacaagattaattataagaggtgacatggaaaaatggggaaatgcaa ccacagtgaccgaatttgtgcttgttgggctctctaaaaacttcaaagttcgtgctggattgtttgtcctcttcttgatt atctatctcattgctgtagccggcaatggcctcatattggtgctgattgtcatagattctcacctccacacacccatgta ttttttcctcagcaacctctcctttattgacatcagctatatcaccacctctgtcccacagatgctggtccactgcttca tggacagacctactatcccatggggcagatgttttgctcagatgtgtagtgctctcattttagctgtggtggagtgtctt ttgttagctgtgatggcttatgaccgttttgtggcaatatgttaccctctgcgctacaaccagatcatgagtcgcaattt atgcatccagctggctgtgagtgtgtgggtcagcgccttccttttgactattataccctttttcaccatgcaggcaactt tgtgtgggccaaatgtggtgaatcatttcaagtgtgaactgcaggcagttttgaaactgtcttgctctgacacccatgct aatggaattaccatgatgataaccagtgtctttaccctagcattccccttcttctttatcctggtgacctatggccgtat tggattcactgttttgcgtattcattctgcccaaggtcggagcaaagccttgtccacctgtggatctcatctcacggtag tgagcatatattatggcaccatcttggccatgtatttgaggcctcaagccaagacattctctgatagggaaaaagtggtg gcagtcttttatggagttgtgatccccatgttaaaccccatcatttacagcttgaggaacagggatgtgaagggagcctt ctgtagactggctgggaagaaagtagaggagtaaaccgcccaggaaccaggttgatagatcttccacaaggaagtctttt tttagatatggttttgtaattctataactgagcaccttgtgaagtgtcgttctccaagtattgtcatacatcacctctat ccccctttgtccatgctagctaaggctgatgagtatgaaatcattgaagaattgagctgaatgctactgtgcataattta atattacaggtatactcatgatcaatatggttttaagcacggagaaaaaatataaaatatcatcctataattatgataca atatttccagaaaaagaatagataagatcagtacaagatcaaacttcaagaaactgggtgcagctggattaatcacagaa gatcttaaagattaaagtacaaataaaaccagacatgt |
Protein
Protein ID | habu1_s5910_g16427.t1 |
---|---|
Definition | - |
>habu1_s5910_g16427.t1 MEKWGNATTVTEFVLVGLSKNFKVRAGLFVLFLIIYLIAVAGNGLILVLIVIDSHLHTPMYFFLSNLSFIDISYITTSVP QMLVHCFMDRPTIPWGRCFAQMCSALILAVVECLLLAVMAYDRFVAICYPLRYNQIMSRNLCIQLAVSVWVSAFLLTIIP FFTMQATLCGPNVVNHFKCELQAVLKLSCSDTHANGITMMITSVFTLAFPFFFILVTYGRIGFTVLRIHSAQGRSKALST CGSHLTVVSIYYGTILAMYLRPQAKTFSDREKVVAVFYGVVIPMLNPIIYSLRNRDVKGAFCRLAGKKVEE |