Gene
| Gene Model ID | habu1_s5910_g16428 |
|---|---|
| Locus | habu1_scaffold5910 : 904806 ... 908733 : + |
| To GenomeBrowser | habu1_scaffold5910:904806..908733 |
| Genes list of scaffold | habu1_scaffold5910 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5910_g16428.t1 | 1 | 1 | 7TM_GPCR_Srsx | 41 | 171 | 1.2e-08 | 34.4 | 4.4e-12 | 2.2e-08 | 33.6 |
| habu1_s5910_g16428.t1 | 1 | 1 | 7tm_1 | 46 | 293 | 9.2e-24 | 83.9 | 2.5e-27 | 1.3e-23 | 83.5 |
| habu1_s5910_g16428.t1 | 1 | 1 | 7tm_4 | 145 | 286 | 1.6e-37 | 128.4 | 3.30006e-41 | 1.6e-37 | 128.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5910_g16428.t1 | gi|602653222|ref|XP_007445308.1| | PREDICTED: olfactory receptor 13H1-like, partial [Python bivittatus] | 0.0 |
| habu1_s5910_g16428.t1 | gi|602677166|ref|XP_007444035.1| | PREDICTED: olfactory receptor 13H1-like [Python bivittatus] | 0.0 |
| habu1_s5910_g16428.t1 | gi|557258777|ref|XP_006015080.1| | PREDICTED: olfactory receptor 13H1-like [Alligator sinensis] | 0.0 |
| habu1_s5910_g16428.t1 | gi|564259993|ref|XP_006268913.1| | PREDICTED: olfactory receptor 13H1-like [Alligator mississippiensis] | 0.0 |
| habu1_s5910_g16428.t1 | gi|557258783|ref|XP_006015083.1| | PREDICTED: olfactory receptor 13H1-like [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.1 |
| Nose | 0.4 |
| Brain-1 | 0.0 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 1.3 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s5910_g16428.t1 |
|---|---|
| Definition | - |
>habu1_s5910_g16428.t1 agaactgcctatctctaatatgctctggaccttgcgcaattaaacttctctgctaacccctctggaattcgggagaatga gagaaaatatagtaggaacttcaaataaatcactggtgaccgaatttattctgattggattatcagaacatcccagagct cagattgttctcttttggttcctcttgatggtgtatctcattagctttcttggcaatggactcatcatcatgttgagcat tgctgacccccggcttcacacccccatgtatttcttcatttgtgtcctttccaccgtagactttattcttaccaacaatg cacttcctgagatcctagtgaactgcttcatctacaggcccacaatttctttctccagatgtttggtccaaatgtacatt ggcttatttctggttgtagcagagtgtattgttttggcagtcatggcatatgatcgcttggcagctgtatgtcatccatt atactacacgcagatcatgagttggaaattatgcttttatctagtagccatgtcagtggccattgccttcatgacgacac tgatcaacgtgctcttgcagcccactgatttctgtggccatcgcatcatcaaccattttgcatgtgagcttcaatcctta ctcaaactggcttgttccaacacagtcagtgagctctttatgcatatctccagcctctttcttctattccctccctttgg cttcatagtggtgacatacatccgcataggcctggctatacgatatataagctccacccagggacgcagaaaagccttct ccacctgtagttctcaccttgctgtggtcagtgtcttttacggaacaatcatgatcatgtacttgagacccgaagggaaa tccgtttctgaaaaggacaaggtcatatccttagcatatggggctctgactcccatgctcaaccctctgatctacagcct gagaaacaaggatgtcaagggggcattttggatgctggttcaaagaaaaatcttaatgtaatgtagtcaccatctaccat gtaggttcttgttgctgacaatctctagtaacctttcaaaaaggaatttaataaccagcgttactgctcctagtaaaccc cagagggcataagcaataccgaatgttaacgaggaatgtgttagggcttcaagaactagattcacaatacttttggagaa tatcaggttggggaatatattcacaaattatctgagaattttaggtgccaaaatacacccccaaatacattattggtttc accttattgat |
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Protein
| Protein ID | habu1_s5910_g16428.t1 |
|---|---|
| Definition | - |
>habu1_s5910_g16428.t1 MRENIVGTSNKSLVTEFILIGLSEHPRAQIVLFWFLLMVYLISFLGNGLIIMLSIADPRLHTPMYFFICVLSTVDFILTN NALPEILVNCFIYRPTISFSRCLVQMYIGLFLVVAECIVLAVMAYDRLAAVCHPLYYTQIMSWKLCFYLVAMSVAIAFMT TLINVLLQPTDFCGHRIINHFACELQSLLKLACSNTVSELFMHISSLFLLFPPFGFIVVTYIRIGLAIRYISSTQGRRKA FSTCSSHLAVVSVFYGTIMIMYLRPEGKSVSEKDKVISLAYGALTPMLNPLIYSLRNKDVKGAFWMLVQRKILM |
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