Gene
| Gene Model ID | habu1_s5910_g16431 |
|---|---|
| Locus | habu1_scaffold5910 : 939356 ... 955823 : + |
| To GenomeBrowser | habu1_scaffold5910:939356..955823 |
| Genes list of scaffold | habu1_scaffold5910 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lysozyme milk isozyme-like | EC:3.2.1.17 GO:0003796 GO:0005975 GO:0019835 GO:0042742 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5910_g16431.t1 | 1 | 1 | KN_motif | 31 | 48 | 1.4e-10 | 40.7 | 1.2e-13 | 2.6e-10 | 39.9 |
| habu1_s5910_g16431.t1 | 2 | 1 | Lys | 60 | 148 | 0.0 | 254.1 | 2.2e-33 | 4.6e-30 | 104.1 |
| habu1_s5910_g16431.t1 | 1 | 1 | SLT | 89 | 141 | 4.6e-06 | 26.1 | 4.4e-08 | 9.4e-05 | 21.8 |
| habu1_s5910_g16431.t1 | 2 | 2 | Lys | 174 | 300 | 0.0 | 254.1 | 0.0 | 5.60519e-45 | 152.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5910_g16431.t1 | gi|472362721|ref|XP_004400944.1| | PREDICTED: lysozyme C, milk isozyme-like [Odobenus rosmarus divergens] | 0.0 |
| habu1_s5910_g16431.t1 | gi|602643038|ref|XP_007444758.1| | PREDICTED: lysozyme C, milk isozyme-like [Python bivittatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.3 |
| Venom grand-1 | 0.3 |
| Pit, infrared sensing | 0.3 |
| Nose | 0.3 |
| Brain-1 | 0.3 |
| Eye | 0.4 |
| fetal fibroblast | 0.7 |
| venom gland-2 | 1.4 |
| Brain-2 | 0.4 |
| Spleen | 1.9 |
| Lung | 1137.2 |
| Liver | 0.4 |
| Kidney | 2.7 |
| Pancreas | 6.2 |
| Small intestine | 1909.0 |
| Large intestine | 0.4 |
| Stomach | 516.1 |
| heart | 1.2 |
| ovary | 1.2 |
| cheek muscle | 28.2 |
Transcript
| Transcript ID | habu1_s5910_g16431.t1 |
|---|---|
| Definition | - |
>habu1_s5910_g16431.t1 tgccgcctctgtgactcctgtccttacaggttaaagcgccgcgaggttgcatgccttggacttgatgcttgatttgcatg actcctaataatcaggtgctggatttgccagtgagcaaacatggcccaccactcagtcaatattaatggcagttttacag caaatgaagaaaatgacataaatggggaggatgacaaaattcagaaagatccctattttgtggaaacaccttacggctac cagcttgatctggactttctcaaaaaaatctggttcctggactcagccaatgaagccaaagtatttaaaaaatgtgaact ggcttcaaaactgaaaagaaatagcatggatagctatactggctatgccttgggcaactggatctgtatggcttatcatg agagtggatacaacacccaagctgtcgggccaccaaacacagatggcagtcttgactatgggatcttccagataaacagc cgctattggtgcaacaataaccagggccctacagctaatggctgcaacaagccttgcagtgctgtcctagagaagtcaga catcatcttccaaggagctgcagcaatgaaggcactagtgctcgccctcctcttcctcttcattgcagccaatgaagcca aaatattctccaaatgtgaactggctagaattctgaaacaaaatggcatggatagatatcacggctatgccttgggcaac tggatctgtatggcttattatcagagcagatacaacagccgatttttggggcctcaaacctcagatggcaatcgcgaata tgggattttccagataagcagccgttggtggtgcaacaattaccagggtcccacagccaatggctgcaataggccttgca gtgctttcctaactgataacatcacagctgatattgcttgtgctaagagaattgtgcgtgatccagcagggatgaatgcc tgggctgcctggaaaaagtactgcaaaggaaaaaatctgtcagaatggaccagtggctgccgactctgagattgatgatc ttgcatttctcttcctcctcctgtgatgaaaatgatattattccttatataaccacactgaacagtttaattctatgcct gcattccacatattgggaagaatgagtttgtttgcacacaaacaatgatttttaaatggtttctgggtggaaaagaggga aagaccttgctttttaaaatcttcaaaaattgcttcaataaaacgagcattgtgcattatgcct |
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Protein
| Protein ID | habu1_s5910_g16431.t1 |
|---|---|
| Definition | - |
>habu1_s5910_g16431.t1 MAHHSVNINGSFTANEENDINGEDDKIQKDPYFVETPYGYQLDLDFLKKIWFLDSANEAKVFKKCELASKLKRNSMDSYT GYALGNWICMAYHESGYNTQAVGPPNTDGSLDYGIFQINSRYWCNNNQGPTANGCNKPCSAVLEKSDIIFQGAAAMKALV LALLFLFIAANEAKIFSKCELARILKQNGMDRYHGYALGNWICMAYYQSRYNSRFLGPQTSDGNREYGIFQISSRWWCNN YQGPTANGCNRPCSAFLTDNITADIACAKRIVRDPAGMNAWAAWKKYCKGKNLSEWTSGCRL |
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