Gene
| Gene Model ID | habu1_s6078_g16646 |
|---|---|
| Locus | habu1_scaffold6078 : 9645 ... 11425 : - |
| To GenomeBrowser | habu1_scaffold6078:9645..11425 |
| Genes list of scaffold | habu1_scaffold6078 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6078_g16646.t1 | 1 | 1 | Lipocalin | 3 | 90 | 3.3e-11 | 43.3 | 2.7e-15 | 4.0e-11 | 43.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6078_g16646.t1 | gi|148234712|ref|NP_001086294.1| | prostaglandin D2 synthase 21kDa (brain) precursor [Xenopus laevis] | 2.0e-07 |
| habu1_s6078_g16646.t1 | gi|1213589|dbj|BAA12075.1| | prostaglandin D synthase [Xenopus laevis] | 2.0e-07 |
| habu1_s6078_g16646.t1 | gi|147904028|ref|NP_001081513.1| | prostaglandin D2 synthase, brain precursor [Xenopus laevis] | 7.0e-07 |
| habu1_s6078_g16646.t1 | gi|118403944|ref|NP_001072245.1| | complement component 8, gamma polypeptide, gene 2 precursor [Xenopus (Silurana) tropicalis] | 4.0e-06 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.1 |
| Nose | 0.0 |
| Brain-1 | 0.1 |
| Eye | 0.6 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.1 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.1 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s6078_g16646.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16646.t1 cgaacttcaataaccaaagggtcagagcggaaaatcctggaaggaatttcttctcctcccaactctaagtaggagagaag cccgggggagcttggggggcccttggtgctgggtggttggctgggaggcgtttcacgacccaactagggaacatcatcag tcctgcaagggttggcttcccttacaaatggtgcaagggagtttacgcaggcctggcacgaagagtttgggagcccctcc ccttcagtttgggaggagaagcctcaatggctgtctctcttctgggctccagagaggcgtcttccccactgccagattnn nnnnnnnnnnnnnnnnnnnnnnnnnaaaggaggtctgatgtacacctttaagtctcttgaaaacggccagtgcaagacta gacagctcccgttcactaaatatcagaagccggggaaattcaagacctcaagccccaccttcggccaaattgtggatacg gattatgaaacctacttgattatttacttcatctgggggttggacaccttcctgacacttgatggcagacagcaaaactt aacgccagatttggagacgaaattcaagaacgttgctgcctctgcaggaatcacaggagaggttgtgcccgttgtcttga aagaaacttgctaagagctcaaggcggagaagtgcagatatggagcacagccagcaaacccccaccccagttgggaacgg atgaagaccccgtctatgctaaaaggacccctgcaggcggctcccatcctgccagccagaaggccgatgccaacccttgc ttgtcaaataaagcataaataaaacacagcaaac |
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Protein
| Protein ID | habu1_s6078_g16646.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16646.t1 MYTFKSLENGQCKTRQLPFTKYQKPGKFKTSSPTFGQIVDTDYETYLIIYFIWGLDTFLTLDGRQQNLTPDLETKFKNVA ASAGITGEVVPVVLKETC |
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