Gene
| Gene Model ID | habu1_s6078_g16647 |
|---|---|
| Locus | habu1_scaffold6078 : 12872 ... 17415 : - |
| To GenomeBrowser | habu1_scaffold6078:12872..17415 |
| Genes list of scaffold | habu1_scaffold6078 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lipocalin [Azemiops feae] | GO:0005215 GO:0006629 GO:0006810 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6078_g16647.t1 | 1 | 1 | Lipocalin | 32 | 165 | 4.4e-09 | 36.4 | 7.1e-13 | 5.3e-09 | 36.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6078_g16647.t1 | gi|348574748|ref|XP_003473152.1| | PREDICTED: prostaglandin-H2 D-isomerase isoform X1 [Cavia porcellus] | 9.0e-10 |
| habu1_s6078_g16647.t1 | gi|602640643|ref|XP_007427129.1| | PREDICTED: olfactory protein-like [Python bivittatus] | 2.0e-09 |
| habu1_s6078_g16647.t1 | gi|512869866|ref|XP_004892072.1| | 2.0e-08 | |
| habu1_s6078_g16647.t1 | gi|533191550|ref|XP_005408626.1| | PREDICTED: prostaglandin-H2 D-isomerase [Chinchilla lanigera] | 3.0e-08 |
| habu1_s6078_g16647.t1 | gi|507685603|ref|XP_004640568.1| | 7.0e-08 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.5 |
| Venom grand-1 | 0.6 |
| Pit, infrared sensing | 7.8 |
| Nose | 2.2 |
| Brain-1 | 8.8 |
| Eye | 8504.8 |
| fetal fibroblast | 0.6 |
| venom gland-2 | 1.3 |
| Brain-2 | 0.6 |
| Spleen | 1.2 |
| Lung | 0.4 |
| Liver | 2.1 |
| Kidney | 1.0 |
| Pancreas | 1.5 |
| Small intestine | 0.4 |
| Large intestine | 0.6 |
| Stomach | 0.8 |
| heart | 0.7 |
| ovary | 0.7 |
| cheek muscle | 1.6 |
Transcript
| Transcript ID | habu1_s6078_g16647.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16647.t1 ccccgggctctataagagcaggaggccctgcgagtgccagtcacctgcctccgagtctccgcatattcttgggctgagaa ggagaaagggactagcgagatgaaatcctggctcttcgctttgggccttgccctctgctgcgtcgtccaggctgaatgga aagaagtgaccacaatcagcaacaaggatatgggtccctggataagctttgttgttgcgtgtaactcatcatactgcctg gaccagataagaaacatgtcagcatttgttgcagaggtgtcacaaccagaggaaggagtatttagcattctggtctttat ccacatgccggacgggtgcaagaacgtaacgtatcagtataagaaaggagaagatgggaaataccgcagtttctatggtg attcagtggtgacagtggagtccatgaaggccaaaaatgagtacgtcatgtccatcatcaacgtcaacaacgagttcaga accaccacacttcacggtcggaaagtgacccaggatccagagatacttcagaattttaatgatgaatgtaaaaagctcgg ctacaaagaagatgagattgtggttttaaacccaaccgtgaagtgccaaaaagaagaataggtgaccaaaggggaggcct cgaaactgccgggagcagcggctgggcgtgttttgggcttggctcaaattccagggaggaatcttaataaatagactcca aaaacgcaactcc |
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Protein
| Protein ID | habu1_s6078_g16647.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16647.t1 MKSWLFALGLALCCVVQAEWKEVTTISNKDMGPWISFVVACNSSYCLDQIRNMSAFVAEVSQPEEGVFSILVFIHMPDGC KNVTYQYKKGEDGKYRSFYGDSVVTVESMKAKNEYVMSIINVNNEFRTTTLHGRKVTQDPEILQNFNDECKKLGYKEDEI VVLNPTVKCQKEE |
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