Gene
| Gene Model ID | habu1_s6078_g16649 |
|---|---|
| Locus | habu1_scaffold6078 : 30960 ... 33675 : - |
| To GenomeBrowser | habu1_scaffold6078:30960..33675 |
| Genes list of scaffold | habu1_scaffold6078 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6078_g16649.t1 | 1 | 1 | Lipocalin | 32 | 161 | 1.1e-20 | 74.0 | 9.5e-25 | 1.4e-20 | 73.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6078_g16649.t1 | gi|602640639|ref|XP_007427127.1| | PREDICTED: extracellular fatty acid-binding protein-like [Python bivittatus] | 0.0 |
| habu1_s6078_g16649.t1 | gi|327264870|ref|XP_003217234.1| | PREDICTED: lipocalin-15 [Anolis carolinensis] | 3.0e-35 |
| habu1_s6078_g16649.t1 | gi|557279480|ref|XP_006022779.1| | PREDICTED: lipocalin-15-like [Alligator sinensis] | 3.0e-27 |
| habu1_s6078_g16649.t1 | gi|557279484|ref|XP_006022781.1| | PREDICTED: lipocalin-15-like [Alligator sinensis] | 5.0e-26 |
| habu1_s6078_g16649.t1 | gi|733912992|ref|XP_010718980.1| | PREDICTED: lipocalin-15-like [Meleagris gallopavo] | 9.0e-25 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.1 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 2.6 |
| Nose | 729.5 |
| Brain-1 | 11.2 |
| Eye | 4.2 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 1.7 |
| Spleen | 0.2 |
| Lung | 0.0 |
| Liver | 0.4 |
| Kidney | 0.2 |
| Pancreas | 0.0 |
| Small intestine | 0.1 |
| Large intestine | 0.1 |
| Stomach | 0.2 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s6078_g16649.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16649.t1 ccggcacatgaggagcaccaagacagacccaccagcatgaaggccgccctgctcagcctcgccaccttctgcatgtttgg tgtccaggccgacgtggaagtggatccacatttcgaccttaaaaggtttgcagggaagtggcacatcccggcactcgcct ccactgatccgatgcttcagagcctgaaggacatcatcacgacaccggcggcccgaatcgtccccttaccaaatggcaac ctggaaatagaaacttactacctattgggagaaaattgcgaagggatgaagggcacctatatgaagactgagcaaccggg acactttaccgcaactgacgagaatggcaagaaggacctgagggtgatggccagcgatgccaacttcgccatcgtctacg tccagcgggagatgaaggagatgccgcccagcaggagtctccagctttacagcagagacccaaagggaagtaagaacatg gaccaattcaaggcctattgccagaagatggggctgatgggcgagctggtggtcccgcccttgtccgatcaatgtttcaa gcaaatcagcggttgaagagaaccagcctgacccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncatttgccttgcctacattccttttccttctgtggaataaa tagatcacaacttctcctttttcttacgatgttttttgtggggcctctggggaaggtgcaaagttaaagttaaaacaata gcaaagtaaaaaggataaacttctggttattgttgtcttct |
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Protein
| Protein ID | habu1_s6078_g16649.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16649.t1 MKAALLSLATFCMFGVQADVEVDPHFDLKRFAGKWHIPALASTDPMLQSLKDIITTPAARIVPLPNGNLEIETYYLLGEN CEGMKGTYMKTEQPGHFTATDENGKKDLRVMASDANFAIVYVQREMKEMPPSRSLQLYSRDPKGSKNMDQFKAYCQKMGL MGELVVPPLSDQCFKQISG |
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