Gene
| Gene Model ID | habu1_s6078_g16650 |
|---|---|
| Locus | habu1_scaffold6078 : 34411 ... 37125 : - |
| To GenomeBrowser | habu1_scaffold6078:34411..37125 |
| Genes list of scaffold | habu1_scaffold6078 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| PREDICTED: lipocalin-like [Python bivittatus] | GO:0005215 GO:0005576 GO:0006629 GO:0006810 GO:0036094 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6078_g16650.t1 | 1 | 1 | Lipocalin | 13 | 155 | 3.4e-29 | 101.6 | 2.6e-33 | 3.8e-29 | 101.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6078_g16650.t1 | gi|602640637|ref|XP_007427126.1| | PREDICTED: lipocalin-like [Python bivittatus] | 0.0 |
| habu1_s6078_g16650.t1 | gi|558216376|ref|XP_006134824.1| | PREDICTED: lipocalin-like [Pelodiscus sinensis] | 0.0 |
| habu1_s6078_g16650.t1 | gi|697454799|ref|XP_009666352.1| | PREDICTED: lipocalin-like [Struthio camelus australis] | 0.0 |
| habu1_s6078_g16650.t1 | gi|719770368|ref|XP_010219024.1| | PREDICTED: lipocalin-like [Tinamus guttatus] | 0.0 |
| habu1_s6078_g16650.t1 | gi|591386596|ref|XP_007067718.1| | PREDICTED: lipocalin-like [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 12.5 |
| Venom grand-1 | 9.0 |
| Pit, infrared sensing | 47.3 |
| Nose | 18.7 |
| Brain-1 | 2829.3 |
| Eye | 1395.8 |
| fetal fibroblast | 2.1 |
| venom gland-2 | 5.7 |
| Brain-2 | 1310.4 |
| Spleen | 14.1 |
| Lung | 36.6 |
| Liver | 1466.9 |
| Kidney | 106.5 |
| Pancreas | 1.6 |
| Small intestine | 4.2 |
| Large intestine | 26.4 |
| Stomach | 19.5 |
| heart | 2.1 |
| ovary | 6.5 |
| cheek muscle | 3.6 |
Transcript
| Transcript ID | habu1_s6078_g16650.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16650.t1 ggggccggcctccagcacagggttgccccttggcctgctgctgggctggccaatatatatagccggctgccctggcttct ggctgaccgttcctggggaagaagcctttgcagagacgccactccaggcagagccagggaacttcagcatgtgggcccag ccagctgcccttttggccctgctttgcctgctccaggtgggggccgagatgcccgtgcaggctgacttccagcaagagca gttcacaggcacctggtacagcatcggcctggcctccaactcccggtggttcaaggagaaaaggcaggtgatcaagatgt gcaccacggttgtcacccccacggaagacgggaacctggacatcgcctccacctaccccaagcttgaccagtgcgagacc aagaggacccgtttcttccggacggaggagcccggccgcttcacctacaccagcccttggtccggaagcgcccacaacat ccgggtgctggagaccaactatgacgagttcgcgctgctgggggacaccatcaccaagggggccgacaccttcaccatgg tcaccctgtacgggaggcagaggcagctgcgcccggagctgctggcgaagttcacccagacggccttggggcagggcctt gcccaggaagacgtcctcatcctgccccggactgatctgtgcctgggagaaactgcctagcttctggcttccgcctccaa ggaggggggcgaaggcccttttctccccgcagtgctggaattctccgtgtggcctcctttcccctcagcccagcacctct cctgcctctcgcctcaaatagcagcctttgtcctggcctggaaatattaataagagcaataataaaataaaatgtaacac agaccggt |
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Protein
| Protein ID | habu1_s6078_g16650.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16650.t1 MPVQADFQQEQFTGTWYSIGLASNSRWFKEKRQVIKMCTTVVTPTEDGNLDIASTYPKLDQCETKRTRFFRTEEPGRFTY TSPWSGSAHNIRVLETNYDEFALLGDTITKGADTFTMVTLYGRQRQLRPELLAKFTQTALGQGLAQEDVLILPRTDLCLG ETA |
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