Gene
| Gene Model ID | habu1_s6078_g16651 |
|---|---|
| Locus | habu1_scaffold6078 : 38671 ... 43315 : - |
| To GenomeBrowser | habu1_scaffold6078:38671..43315 |
| Genes list of scaffold | habu1_scaffold6078 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| complement component c8 gamma chain | GO:0044421 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6078_g16651.t1 | 1 | 1 | Lipocalin | 45 | 177 | 1.0e-16 | 61.2 | 9.3e-21 | 1.4e-16 | 60.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6078_g16651.t1 | gi|602640623|ref|XP_007427119.1| | PREDICTED: complement component C8 gamma chain isoform X1 [Python bivittatus] | 0.0 |
| habu1_s6078_g16651.t1 | gi|602640625|ref|XP_007427120.1| | PREDICTED: complement component C8 gamma chain isoform X2 [Python bivittatus] | 0.0 |
| habu1_s6078_g16651.t1 | gi|557279438|ref|XP_006022758.1| | PREDICTED: complement component C8 gamma chain [Alligator sinensis] | 0.0 |
| habu1_s6078_g16651.t1 | gi|558216372|ref|XP_006134823.1| | PREDICTED: complement component C8 gamma chain [Pelodiscus sinensis] | 0.0 |
| habu1_s6078_g16651.t1 | gi|564257337|ref|XP_006267623.1| | PREDICTED: complement component C8 gamma chain [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.0 |
| Eye | 0.1 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.2 |
| Brain-2 | 0.1 |
| Spleen | 0.1 |
| Lung | 1.2 |
| Liver | 627.0 |
| Kidney | 6.0 |
| Pancreas | 0.1 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.1 |
| ovary | 0.3 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s6078_g16651.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16651.t1 gttgtcatcatgttgtactccccgttttttttttgtaaacaataaaacaatattgtgtaaaacagtatttttatctgctg tcgtcttttttttttatcaagaggggaaaactactgctttctgtcgtttactgtatgctagacagctaggaataaggaag ccggattaatggctaactgggagcccgcccgcccgccctcctgtgcccaagggcaccccgagccctgccggtcattgccg tcccaccatggcgcccattgctgtccttctcctggctgggcttttgctggcttcgccctcctgggctcggaggcccaaat cctccaagagccccatcgacaacatcagtgcccaggaagagtttgatcctgcccggtttgcagggaagtggttcctggtg ggggtggcctctgattgtctttacctgcgtgagaatggctaccgggtggaagccaccaacgtggttgtgtcggtgactga cagcggctcgctgctctttagcaccttccggcctctggaggggatttgctggaacatcaagcagagctattttgccggca agacccctgggcggttcctcctgaaaggccgctctgccccagtggacgtggtggtgggggagacagactacagcagctac gccatcttgtacttccagaagaaccgcaagatttcagccaaactttacggacgaacggcacaggtggcaaacgtcgccct gaagaagttcgaagctgccatgactgccatgggcgtcaccgatgaccacatcttttattaccccgtctacggattttgta gcacagctgaccaattccacatccttgacgaaacgaaatacacaggatagcaggagtcatgagcgatccgacgctccacc tgtgtcaagacaacctgtgtggacactcaagaaacaggagttaccaggcctttccttctctttgttcccatgaaaataaa acaagaaaacccaatttgacgt |
|
Protein
| Protein ID | habu1_s6078_g16651.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16651.t1 MAPIAVLLLAGLLLASPSWARRPKSSKSPIDNISAQEEFDPARFAGKWFLVGVASDCLYLRENGYRVEATNVVVSVTDSG SLLFSTFRPLEGICWNIKQSYFAGKTPGRFLLKGRSAPVDVVVGETDYSSYAILYFQKNRKISAKLYGRTAQVANVALKK FEAAMTAMGVTDDHIFYYPVYGFCSTADQFHILDETKYTG |
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