Gene
| Gene Model ID | habu1_s6078_g16653 |
|---|---|
| Locus | habu1_scaffold6078 : 61236 ... 64423 : + |
| To GenomeBrowser | habu1_scaffold6078:61236..64423 |
| Genes list of scaffold | habu1_scaffold6078 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6078_g16653.t1 | 1 | 1 | WD40 | 390 | 419 | 6.2e-10 | 38.5 | 4.6e-11 | 6.8e-07 | 28.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6078_g16653.t1 | gi|602640633|ref|XP_007427124.1| | PREDICTED: F-box/WD repeat-containing protein 5 isoform X4 [Python bivittatus] | 0.0 |
| habu1_s6078_g16653.t1 | gi|602640627|ref|XP_007427121.1| | PREDICTED: F-box/WD repeat-containing protein 5 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s6078_g16653.t1 | gi|723120926|ref|XP_010295435.1| | PREDICTED: F-box/WD repeat-containing protein 5, partial [Phaethon lepturus] | 0.0 |
| habu1_s6078_g16653.t1 | gi|690456052|ref|XP_009327329.1| | PREDICTED: F-box/WD repeat-containing protein 5 [Pygoscelis adeliae] | 0.0 |
| habu1_s6078_g16653.t1 | gi|704279166|ref|XP_010162065.1| | PREDICTED: F-box/WD repeat-containing protein 5, partial [Caprimulgus carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 16.5 |
| Venom grand-1 | 46.8 |
| Pit, infrared sensing | 18.6 |
| Nose | 14.0 |
| Brain-1 | 6.4 |
| Eye | 13.6 |
| fetal fibroblast | 18.3 |
| venom gland-2 | 50.7 |
| Brain-2 | 6.0 |
| Spleen | 21.8 |
| Lung | 15.2 |
| Liver | 29.1 |
| Kidney | 25.4 |
| Pancreas | 27.4 |
| Small intestine | 32.0 |
| Large intestine | 19.3 |
| Stomach | 21.5 |
| heart | 14.4 |
| ovary | 19.5 |
| cheek muscle | 46.2 |
Transcript
| Transcript ID | habu1_s6078_g16653.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16653.t1 gttgggaaggcagtgttgttaggtctctctggtgatgcagctgaaggttgctgggcaaggccccggtttgtgtggttggg gggtctgggctggggtccttggagccacccacccacccgaggccctggcccttctcctccctggctgcagatctggaaca atgatcgccagatctcactgctgcatagcaccagcatgaagaaatacaactggagctacactcagttctcccagttcaac gcagacgactctctcctcttggtgtccggagtctttatgggcccccggagctcctcgtctggggagatcgcagtcatcgg cctggagaacttcgaactcctctcccacgtccgcaacaagccctacgatgtgtttggctgctggctgaacgagaccaacc tgatttccagcaacctgcaccggatcgggttcctcacttcctgttccgtgttgtggctgaacaatgccttccagggcatc gagtctgagaacgtcaacgtggtgaaacggctcttcaaaatccagaacctgaacgccagcaccgtccggacagtgatggt ggtggactgcagccgctacagctctgctgaggagctgacgagtcccggagagcaggggggagaggagagccctgcttctc cctgccaggagtgcccccccgaggagacggaggagagggcccagccgaggcgtttcccagcggccgaaggggaggcgggg actgaagatgggttggaccgcttcctgagtgacgtcatggcgggacgcgtccggccaatcatgacggagatggagatgga gacgaaagtggcccgactcctggcccggaaccgcacgaagcccccggagcccaacctgctctccctgcagggtgggaaca agaaatacctggtcttcagcaccggctgcctcacctactcacctcaccagattggaattaagcagatccttccccatcaa atgaccaccaccgggcctgttctgggggaagagaggaattcggacagattttttgattcgctggatcacgtcattgatat tcacgggcatatcattggcatgggcctctccccagaccacaggtacttgtacgtcaacagccgcgcttggcccgagggct gcgtcatttccgatcctttgcagccgccccccatcgccgaggagattgagctgcgtgtgctggacctcaagaccatgaag gaggccaagcgggcattgcgggcacaccgggccttcacccccagcgaagagtttaacttcatttttcttgatgtcagcag ggacttcgtggccagtggggcggaggatcgccacggatacatctgggaccggcactacgacatctgcttagccaaactgc ggcacgacgacgtggtgaactcggtggccttcagccctgtggagcaggagctcctcctgacagcctgtgcggacagcacc attaaagtgtggcgttctccctgcgccgtgcgtgtccttcacacagagaagccccggcttcgtggacgtctcttctcctg ggccacgaagcagagaacgtgagccgggcagggcttgcttcaggccgtgtgtgtgtgtgtcatcccctgcgactctggcc cggcccactgaccttcactgcttgggtgaggcctggaagaatcgccatttgaggacgcagctgcaggctggtgggtgctg tccaaggtccttttggaggagaccacctgcttgcaggctggcatagttctgtaggatgctgccaccccgatgtggcttct gggctttggacagccacaaatggagccaggaaacctgtgctggtcctgctgagtctctgcttggcagggaggtaagagaa aaagcaggtgagaaacacagctggccacttcagtgcctctgctctggttgacccgggtggcagggaggctcgctctgaaa atttttggagctgcagcctgccaggccctggatggagcacgtgtgccctccagctctgggagttctttcacgttccctgt aaaacattttcttttggggagggggaatataagctgcgaaggacgactggtgtttcttttctgaagcagaaagaaaaatg tttgtgtggctgctcaagaatgtgcactttgagggggtgggcagcttcaatgccccgccaaccttggccacccagtgcgg cctggcttggtcttaataaactttgcttgacttgttcttgca |
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Protein
| Protein ID | habu1_s6078_g16653.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16653.t1 MKKYNWSYTQFSQFNADDSLLLVSGVFMGPRSSSSGEIAVIGLENFELLSHVRNKPYDVFGCWLNETNLISSNLHRIGFL TSCSVLWLNNAFQGIESENVNVVKRLFKIQNLNASTVRTVMVVDCSRYSSAEELTSPGEQGGEESPASPCQECPPEETEE RAQPRRFPAAEGEAGTEDGLDRFLSDVMAGRVRPIMTEMEMETKVARLLARNRTKPPEPNLLSLQGGNKKYLVFSTGCLT YSPHQIGIKQILPHQMTTTGPVLGEERNSDRFFDSLDHVIDIHGHIIGMGLSPDHRYLYVNSRAWPEGCVISDPLQPPPI AEEIELRVLDLKTMKEAKRALRAHRAFTPSEEFNFIFLDVSRDFVASGAEDRHGYIWDRHYDICLAKLRHDDVVNSVAFS PVEQELLLTACADSTIKVWRSPCAVRVLHTEKPRLRGRLFSWATKQRT |
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