Gene
| Gene Model ID | habu1_s6078_g16654 |
|---|---|
| Locus | habu1_scaffold6078 : 64634 ... 72035 : - |
| To GenomeBrowser | habu1_scaffold6078:64634..72035 |
| Genes list of scaffold | habu1_scaffold6078 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tnf receptor-associated factor 2 isoform x1 | EC:6.3.2.19 GO:0004842 GO:0007250 GO:0008270 GO:0033209 GO:0042981 GO:0046328 GO:0051865 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6078_g16654.t2 | 2 | 1 | zf-TRAF | 152 | 195 | 9.6e-17 | 61.1 | 1.3e-07 | 0.00021 | 21.5 |
| habu1_s6078_g16654.t2 | 2 | 2 | zf-TRAF | 205 | 261 | 9.6e-17 | 61.1 | 1.2e-17 | 1.9e-14 | 53.7 |
| habu1_s6078_g16654.t2 | 1 | 1 | MATH | 427 | 549 | 1.1e-26 | 93.4 | 1.0e-29 | 1.7e-26 | 92.8 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 6.5 |
| Venom grand-1 | 8.4 |
| Pit, infrared sensing | 7.4 |
| Nose | 6.5 |
| Brain-1 | 3.3 |
| Eye | 4.9 |
| fetal fibroblast | 12.4 |
| venom gland-2 | 9.5 |
| Brain-2 | 3.3 |
| Spleen | 12.4 |
| Lung | 10.4 |
| Liver | 6.2 |
| Kidney | 4.3 |
| Pancreas | 3.8 |
| Small intestine | 5.7 |
| Large intestine | 7.0 |
| Stomach | 4.3 |
| heart | 4.5 |
| ovary | 32.7 |
| cheek muscle | 12.4 |
Transcript
| Transcript ID | habu1_s6078_g16654.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16654.t1 ccggtccccggtcacgactccggccgtagggttgtgaaggccactcgaacaggctggttcacatggcatcggccaacgca acccctcctggctctttggaagtaaatcagccagggttccccaaggagattctgggcactgaactggtgggcaagtactt gtgttcagagtgccggaacattttgcggcggccgtttcaagcccagtgtggtcatcgctactgctcctattgcttgaaga aaattctaagctcagggccccagaagtgcgcagcctgccttcaagaggggttgtacgaagaaggtgcctcgatcttggaa accggggtggctttcccagataatgcagctcggcgggaagtggagagtctcccggccatctgtccccaccaaggttgcac gtggaaagggaccataaaagaatatgagagctgccacgaggggagctgcccggccctgctggtggcctgtccggcatgcc agggcctggtcaggctgggcgagaaggagcagcacgccgagcaggagtgtcctgagaggagcctcagatgcaaatattgc caagctcttttccacttctccgaaaacaaggcccacgaggcagtgtgccccaaatttcctctggcctgtgagggctgcgg aaagaagatcccccgggagaagtttctggaccacgtcaagagctgcagcaaatgccgagccccctgcaggttccagccgg tcggctgcacccacctgatggagaacgagaagcttcccgagcacgagaggagccacctgggcgagcatctctacatgctg ctgagcttcgtgctgagcttgggctctgcgtccagcaagctggagcccctgctggaccacctctcggcggaggccggctg tgccctggcggggggcaggcccctggccccagaggcagagctgcccggctccttgggactcctggggaagtgcgaggccc tggagaggaagacggtcactttcgagaacatcgtgtgtgtgctgaaccgggaggtggaaaaggtgtcgctcgtggccgaa gccgccagccggcagcatcggcttgaccaggagaagatcgaggccctgagcaccaaggtgcggcagctggagaggagcat tgccatgaaggacctggccctggccgaaatggagcacgccatccaggagatggaggcggcctcctatgacggcgtcttca tctggaagattgcagacttcgccaggaagcggcaggaggcagtcgcggggcgctctccggccatcttctcctcagccttc tacaccagcaagtacggctacaagatgtgcctgcggatctacctcaatggggatggcaccgggcggggcacccacctgtc tctcttcttcgtggtgatgaaagggcccaacgaccccctgctgcggtggcctttcaaccagaaggtcaccctgatgcttc tggaccagaacaaccgcgaacacgtcattgacgccttccggcccgacgtcacctcctcctccttccagcggcccatcagc gatatgaacattgccagcggctgcccgctcttctgccccatcgccaagatggagtccaagaactcctacgtgcgtgacga caccatcttcattaaagccattgtagacctcacgggcctttaacgccttgcccgctgggccctcggagcacgggactgtg tggcctcctgggcaacgagggcctggcggaccttctcttagccttggactaccccctggccacggggaggtggctttgaa agccaggtgggtcctgaaggagaggcctttcctggtggccccaacacgctcgggggctcctcccctgccctggattgctg ttggtggattgggagggggtggctgctggctaggccagaaagggaaccgagtggctggacacccaaaggaagatccagca gctgttctgggcagtggcagagcccgtggaggggacttttagaggctgctgacagctgagctgctcctggccagcctgct tgcactgccaggcaatccccccctccccacctgatcaggttctctgggcatggaggcccggcagctgccagggaagacgc tccagcagaggttgagaaggggggggcttccactggagctcgcaacaaaagagccctgggaaatcgctcctctctcttct ccactggcgaggggggggctactctgaggagaagcaaggtctcccaggaggtttgaggctatcagggcagattttgattg tcctgctgaaatgctcttgtctgggcaaacgaggacgctgaataaaacattgtagaggcgagccccgt |
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| Transcript ID | habu1_s6078_g16654.t2 |
| Definition | - |
>habu1_s6078_g16654.t2 ccggtccccggtcacgactccggccgtagggttgtgaaggccactcgaacaggctggttcacatggcatcggccaacgca acccctcctggctctttggaagtaaatcagccagggttccccaaggagattctgggcactgaactggtgggcaagtactt gtgttcagagtgccggaacattttgcggcggccgtttcaagcccagtgtggtcatcgctactgctcctattgcttgaaga aaattctaagagcccgaggggaacagattccttccttggctgatggctcagctggcagtgccttccggcttgggctcttg acattttccagctcagggccccagaagtgcgcagcctgccttcaagaggggttgtacgaagaaggtgcctcgatcttgga aaccggggtggctttcccagataatgcagctcggcgggaagtggagagtctcccggccatctgtccccaccaaggttgca cgtggaaagggaccataaaagaatatgagagctgccacgaggggagctgcccggccctgctggtggcctgtccggcatgc cagggcctggtcaggctgggcgagaaggagcagcacgccgagcaggagtgtcctgagaggagcctcagatgcaaatattg ccaagctcttttccacttctccgaaaacaaggcccacgaggcagtgtgccccaaatttcctctggcctgtgagggctgcg gaaagaagatcccccgggagaagtttctggaccacgtcaagagctgcagcaaatgccgagccccctgcaggttccagccg gtcggctgcacccacctgatggagaacgagaagcttcccgagcacgagaggagccacctgggcgagcatctctacatgct gctgagcttcgtgctgagcttgggctctgcgtccagcaagctggagcccctgctggaccacctctcggcggaggccggct gtgccctggcggggggcaggcccctggccccagaggcagagctgcccggctccttgggactcctggggaagtgcgaggcc ctggagaggaagacggtcactttcgagaacatcgtgtgtgtgctgaaccgggaggtggaaaaggtgtcgctcgtggccga agccgccagccggcagcatcggcttgaccaggagaagatcgaggccctgagcaccaaggtgcggcagctggagaggagca ttgccatgaaggacctggccctggccgaaatggagcacgccatccaggagatggaggcggcctcctatgacggcgtcttc atctggaagattgcagacttcgccaggaagcggcaggaggcagtcgcggggcgctctccggccatcttctcctcagcctt ctacaccagcaagtacggctacaagatgtgcctgcggatctacctcaatggggatggcaccgggcggggcacccacctgt ctctcttcttcgtggtgatgaaagggcccaacgaccccctgctgcggtggcctttcaaccagaaggtcaccctgatgctt ctggaccagaacaaccgcgaacacgtcattgacgccttccggcccgacgtcacctcctcctccttccagcggcccatcag cgatatgaacattgccagcggctgcccgctcttctgccccatcgccaagatggagtccaagaactcctacgtgcgtgacg acaccatcttcattaaagccattgtagacctcacgggcctttaacgccttgcccgctgggccctcggagcacgggactgt gtggcctcctgggcaacgagggcctggcggaccttctcttagccttggactaccccctggccacggggaggtggctttga aagccaggtgggtcctgaaggagaggcctttcctggtggccccaacacgctcgggggctcctcccctgccctggattgct gttggtggattgggagggggtggctgctggctaggccagaaagggaaccgagtggctggacacccaaaggaagatccagc agctgttctgggcagtggcagagcccgtggaggggacttttagaggctgctgacagctgagctgctcctggccagcctgc ttgcactgccaggcaatccccccctccccacctgatcaggttctctgggcatggaggcccggcagctgccagggaagacg ctccagcagaggttgagaaggggggggcttccactggagctcgcaacaaaagagccctgggaaatcgctcctctctcttc tccactggcgaggggggggctactctgaggagaagcaaggtctcccaggaggtttgaggctatcagggcagattttgatt gtcctgctgaaatgctcttgtctgggcaaacgaggacgctgaataaaacattgtagaggcgagccccgt |
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Protein
| Protein ID | habu1_s6078_g16654.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16654.t1 MASANATPPGSLEVNQPGFPKEILGTELVGKYLCSECRNILRRPFQAQCGHRYCSYCLKKILSSGPQKCAACLQEGLYEE GASILETGVAFPDNAARREVESLPAICPHQGCTWKGTIKEYESCHEGSCPALLVACPACQGLVRLGEKEQHAEQECPERS LRCKYCQALFHFSENKAHEAVCPKFPLACEGCGKKIPREKFLDHVKSCSKCRAPCRFQPVGCTHLMENEKLPEHERSHLG EHLYMLLSFVLSLGSASSKLEPLLDHLSAEAGCALAGGRPLAPEAELPGSLGLLGKCEALERKTVTFENIVCVLNREVEK VSLVAEAASRQHRLDQEKIEALSTKVRQLERSIAMKDLALAEMEHAIQEMEAASYDGVFIWKIADFARKRQEAVAGRSPA IFSSAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDPLLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSS FQRPISDMNIASGCPLFCPIAKMESKNSYVRDDTIFIKAIVDLTGL |
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| Protein ID | habu1_s6078_g16654.t2 |
| Definition | - |
>habu1_s6078_g16654.t2 MASANATPPGSLEVNQPGFPKEILGTELVGKYLCSECRNILRRPFQAQCGHRYCSYCLKKILRARGEQIPSLADGSAGSA FRLGLLTFSSSGPQKCAACLQEGLYEEGASILETGVAFPDNAARREVESLPAICPHQGCTWKGTIKEYESCHEGSCPALL VACPACQGLVRLGEKEQHAEQECPERSLRCKYCQALFHFSENKAHEAVCPKFPLACEGCGKKIPREKFLDHVKSCSKCRA PCRFQPVGCTHLMENEKLPEHERSHLGEHLYMLLSFVLSLGSASSKLEPLLDHLSAEAGCALAGGRPLAPEAELPGSLGL LGKCEALERKTVTFENIVCVLNREVEKVSLVAEAASRQHRLDQEKIEALSTKVRQLERSIAMKDLALAEMEHAIQEMEAA SYDGVFIWKIADFARKRQEAVAGRSPAIFSSAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDPLLRWPFNQ KVTLMLLDQNNREHVIDAFRPDVTSSSFQRPISDMNIASGCPLFCPIAKMESKNSYVRDDTIFIKAIVDLTGL |
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