Gene
| Gene Model ID | habu1_s6078_g16655 |
|---|---|
| Locus | habu1_scaffold6078 : 73176 ... 74751 : + |
| To GenomeBrowser | habu1_scaffold6078:73176..74751 |
| Genes list of scaffold | habu1_scaffold6078 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| endothelial differentiation-related factor 1 homolog | GO:0003713 GO:0005669 GO:0005730 GO:0005737 GO:0006355 GO:0043388 GO:0043565 GO:0044822 GO:0045941 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6078_g16655.t1 | 1 | 1 | MBF1 | 4 | 73 | 2.8e-28 | 97.7 | 1.6e-31 | 5.9e-28 | 96.6 |
| habu1_s6078_g16655.t1 | 1 | 1 | HTH_3 | 81 | 132 | 1.2e-12 | 47.5 | 4.8e-16 | 1.8e-12 | 46.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6078_g16655.t1 | gi|591386602|ref|XP_007067721.1| | PREDICTED: endothelial differentiation-related factor 1 homolog [Chelonia mydas] | 0.0 |
| habu1_s6078_g16655.t1 | gi|558216337|ref|XP_006134815.1| | PREDICTED: endothelial differentiation-related factor 1 homolog isoform X2 [Pelodiscus sinensis] | 0.0 |
| habu1_s6078_g16655.t1 | gi|637368578|ref|XP_003229399.2| | PREDICTED: endothelial differentiation-related factor 1 [Anolis carolinensis] | 0.0 |
| habu1_s6078_g16655.t1 | gi|530607966|ref|XP_005295658.1| | PREDICTED: endothelial differentiation-related factor 1 isoform X2 [Chrysemys picta bellii] | 0.0 |
| habu1_s6078_g16655.t1 | gi|57525242|ref|NP_001006203.1| | endothelial differentiation-related factor 1 homolog [Gallus gallus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 78.8 |
| Venom grand-1 | 240.2 |
| Pit, infrared sensing | 111.1 |
| Nose | 86.9 |
| Brain-1 | 68.2 |
| Eye | 110.6 |
| fetal fibroblast | 76.0 |
| venom gland-2 | 275.6 |
| Brain-2 | 94.3 |
| Spleen | 166.8 |
| Lung | 210.3 |
| Liver | 372.3 |
| Kidney | 210.7 |
| Pancreas | 281.6 |
| Small intestine | 287.6 |
| Large intestine | 225.0 |
| Stomach | 242.0 |
| heart | 332.4 |
| ovary | 70.9 |
| cheek muscle | 307.0 |
Transcript
| Transcript ID | habu1_s6078_g16655.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16655.t1 acagcccaatggggggtgcatctcgctccgccctcgagagggaaggacgggatgagggagggaacggggagagggacggc ctattgcggaggttgagcagcgaagaggcggcggcagaagcggcggcaggaaccagagacgccatggcggagagcgactg ggacacggtaacggtgctgcgcaagaagggccccagcgcggcccaggccaaatcgaagcaggcggtgctgacggctcaga ggcgaggcgaagacgtggagacctccaaaaagtgggccgcagggcagaacaagcagcactcgatcaccaagaacacggcc aagctggaccgggagaccgaagagctgcaccacgaccgggtcccgctggaggtgggcaaggtgatccagcagggccggca gggcaaggggctgacccaaaaggacctggccacgaaaatcaacgagaagccccaggtcatcgccgactacgagtccggga aggccatccccaacaaccaggtgctgggcaagatcgagagggccatcggccttaagctccgtgggcgggacatcggcagg cccctcgagccgggccccaaagggaagtgaggacaaagcctcgaaatcagtttgccccgactgatctcgcctggccgctc gctcctctagcacggccagggcatctctgccaggctgaagcctccagagtctccaccctgttgtgaatcaacgaaccgct caccgccgacgttcctgccttcctttttcaaagtatccaaatcctaataaagcatctgaatctgccaggggca |
|
Protein
| Protein ID | habu1_s6078_g16655.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16655.t1 MAESDWDTVTVLRKKGPSAAQAKSKQAVLTAQRRGEDVETSKKWAAGQNKQHSITKNTAKLDRETEELHHDRVPLEVGKV IQQGRQGKGLTQKDLATKINEKPQVIADYESGKAIPNNQVLGKIERAIGLKLRGRDIGRPLEPGPKGK |
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