Gene
| Gene Model ID | habu1_s6078_g16656 |
|---|---|
| Locus | habu1_scaffold6078 : 75169 ... 87105 : - |
| To GenomeBrowser | habu1_scaffold6078:75169..87105 |
| Genes list of scaffold | habu1_scaffold6078 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6078_g16656.t3 | 4 | 1 | MAM | 67 | 225 | 0.0 | 314.5 | 8.3e-28 | 6.1e-24 | 84.5 |
| habu1_s6078_g16656.t3 | 2 | 1 | Ldl_recept_a | 232 | 269 | 1.2e-14 | 53.8 | 1.2e-13 | 9.1e-10 | 38.2 |
| habu1_s6078_g16656.t3 | 4 | 2 | MAM | 275 | 433 | 0.0 | 314.5 | 3.1e-37 | 2.3e-33 | 115.2 |
| habu1_s6078_g16656.t3 | 2 | 2 | Ldl_recept_a | 451 | 487 | 1.2e-14 | 53.8 | 1.3e-09 | 9.7e-06 | 25.3 |
| habu1_s6078_g16656.t3 | 4 | 3 | MAM | 486 | 631 | 0.0 | 314.5 | 1.5e-07 | 0.0011 | 18.7 |
| habu1_s6078_g16656.t3 | 4 | 4 | MAM | 646 | 775 | 0.0 | 314.5 | 1.4e-29 | 1.1e-25 | 90.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6078_g16656.t3 | gi|675421610|ref|XP_008924348.1| | PREDICTED: apical endosomal glycoprotein [Manacus vitellinus] | 0.0 |
| habu1_s6078_g16656.t3 | gi|541979144|ref|XP_005442182.1| | PREDICTED: LOW QUALITY PROTEIN: apical endosomal glycoprotein [Falco cherrug] | 0.0 |
| habu1_s6078_g16656.t3 | gi|529423138|ref|XP_005231416.1| | PREDICTED: LOW QUALITY PROTEIN: apical endosomal glycoprotein [Falco peregrinus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.5 |
| Venom grand-1 | 4.4 |
| Pit, infrared sensing | 3.9 |
| Nose | 5.6 |
| Brain-1 | 3.1 |
| Eye | 4.3 |
| fetal fibroblast | 3.9 |
| venom gland-2 | 4.6 |
| Brain-2 | 5.9 |
| Spleen | 5.4 |
| Lung | 8.6 |
| Liver | 12.6 |
| Kidney | 3.9 |
| Pancreas | 3.1 |
| Small intestine | 113.3 |
| Large intestine | 7.4 |
| Stomach | 3.7 |
| heart | 8.3 |
| ovary | 0.9 |
| cheek muscle | 2.9 |
Transcript
| Transcript ID | habu1_s6078_g16656.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16656.t1 ggtgtgcttgctagattggcacgcagctgccgttctcttgcttttattgccccatgaatgtgtccaggccgttgggaccc tctttgcactgaaggtgggtgggagtattctgcccacgtccccctccctatggccagtccccaccctgtgcctgggcagt gcttccctcctgctcggcccctgccgcgtgtctggaaggcaaggtgatcggggaggttgaagtccaggcacattgttgct ggagcagcctttccttcttctcaactgagcaggcttgatctagctgctggcccaggatgccgggatcctgggggctgctg tccttcctgctcctgctgatgctgatggttgggcctccgttttatgtccaggctgtgtttgtcaaccgatgtgggagtcc acgtgtctgtgattttgtgtgtgattgctgggattgttcagatgaaaaccaatgtggctaccagaaggcatcggctctgg gggctcccttcacctgcagcttcgaaggcaccatgtgtggctgggaggacatcagtaacacagcctaccggtgggaccca gcccaggccagcatctccacggggctgcagcttcctttcgaccacacgctgggcacggatttgggctggtacatggcggc gacaaagcagagagcaaagccctcgggcacggctcggctgaggtcccccctgttgcaaggagcagctgctgcctgcgaga tccgagcgtggtatcacctgtggggatcaggtcttaacgagactcagcagcctctcctgaccttggagctgagacaggga aatcgcaccgtccgcctgtggcaaagccctcccgggggcacctactcctggcaggagctggtggcctacaccggtcacat cccgggcagcttccaggtcaccttctccgctgtccagggctcctcctccacagcacagctggccctggacgatgtggaat tccggaactgcggcttcccacgtccccagacctgtggcccagaggccttccactgccagcagggcggctgcattgcgaaa gaccgggtgtgtgacggcaccgccgattgcagggctggtgaggatgaagccactgctgactgtgcctccttcgcagcgtg ctcctttgagggggactggtgccagtggacggtggtccccaatgccactcttccctggctaaggaacgccagcctccacc tggcctcgccttcggtgtggccttcgcgggatcacagcaccaacagccgggaaggcttcttcgcctacgtcgagactcag aagccgaacctgcacgagggaagagcatggctgagcagcccaatgctggccccggacgccccccagccctgctacctggt tctctacctccacctgcatggctcaagcagcaacagccttaatgtctacagccagacggcagacgctttgcggcttgtct ggagccgcacaggagacttgggcaactactggttccgggagaaagtggatttcacggaggcaaagaagttcaagatcatc atcgagggcaggattggaagcgggcacaaagggagcatcgctctggatgaccttcgtctttctcctcactgcagggcggt gcaggacgcccagctcccgcctccccccgtgctgcagccctccagcccttgccccggggggcagtttgcgtgtgaccagg gcaagcgatgcctcgacttccagctgctctgtaacttcaaggccgaatgtgaggacgcctctgacgagcagcagtgtgga atgaccgattttgccaaggaccccgggggctggatggacatcagcgtgggccgcctgcgatggaccgccagccagctcag tcctgtggggcccgttttcggtctgcaggaggggccggggcagatgttctctatggcgcgggctgccactcccgtgttgg gcccttcaggtgtaggctgtgtactgcagatggatttcaccactggcccagaaggcttcctcgcccttgccattgccgat gagagcctgggcacccactggtgggcttggtttgcccggagcaacgggaccgcttcctgggcagaggccacggtccctct gggcgcaaggagaaggcctttccagcttgagctgctggccatgaagggtctcgatggcccccggggacccctgccacttg ccgtcagcaatatctcctttgtgaactgcagtaccggagccccagcctcagccccccaggcagggctgtcctgcaatttt gagaccgactggtgtggctggtatctggagcagaacgacggctttgaatggaggctgagcagaagccgaggaggggccgt ggaccacaccacaggcacaggctctttcctgtttgtggatcctggtggaccctggaatccaggctggcgtgcccggctcg tttctgctccccaggcgactgctgccaccgctgtcgagacctcctgtctttccttctggtatcgcatggatggcccccag attgggaccctggccctgaaagtgaaggaggccggagaatcgggggagcaggtgctttggaccagaacagggagccacgg ggcggtttggcatcgagccgcctcctccatttcccccaagcctggtcagaagtatcaggtgatccttgaggctcttcggg acggctttctggggagcatagctgtggatgacatcacggtgacgtctggagcctgcctggcccagcaccactgctccttt gaggcagacgaatgcggcttctcggtccccaagcagcaggcatggcagcggcagagtggcgcagggggctggggcccccc tgtggatcacaccattggcgagccgagagggcactacatgatcctctgcactggtgcggacaagctcccttcggggcagg tgaccgtcctgcgctctcgcgccttccctcctctgctccgcacccactgcgtctccttttggtactacctgagcggcagt gatccaggatccttgaccgcttacgtggaggaggaagagaaggaagaggaagcggagatggggatgttcagcctggatca gacacagggggcagcctggcggtacggcagctttgtggcaaaagtccacgggagatggcaggtggccttcgcggtgggag gtgctggcggagggccggcctcttacattgccctcgatgacatctttgtgagggaaggcggctgctctgaaccagggtct tgtgacttcgagtcaggcccctgtggctggagcaagccccacggaaactggtacagctgggactggaaggaagcagccac cacgttgcgctccccatctcccaaggaagaccacaccctgggcaccaacgcaggtcactatgcttacgttgacctggcag tgctgagcttgggaaagagcacagcacgcttggcgagtgagcccctggcacccaccacaggctcctgcctgcggttccac taccacatggacttccttgggcacagctctcctgcagagctcagggtgaggctgactggggcgcagggggaaagggtgat ctggaccgccacaggccatcagagctggacttggatgaaccaaacgctcctggtgaccagcctcgtggagttccagattg tcctggaggccagcagtggagcctgggtgagctcaggggtgattgcgctggacgatctccactacgcagctgggccggac tgtgcctccccccaggcagggcaagcggaagagagcagcagcagcagccctctcccagtgtcgaccatcggagtggtggc tggtgtggtgagcaccgtcctgctgctgctgctgcttgcggccacctgttgcctgtggaagaggagagggagtcgggaga ggatggaggaggagcacggcaacgggcagggttttgacaacatcgcctttcgagacgacagaattatcctaccccggatg gctcctaacccagcagcatcctaggttggcccctgccagccccatccggccttgcagcggcctctgttcctctggagagg caacaggagccgtcccttcggactccaaggggacatcctcgagacctgggttgaatcagcctcttttcttgaccagagat agccagattgttcacgaaggttggcatgttcactctatggctactcaaaaagcatttcaacgagaaagttaaaataaacc cactccccataggagtatcg |
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| Transcript ID | habu1_s6078_g16656.t2 |
| Definition | - |
>habu1_s6078_g16656.t2 atttgaatagattcccagattccagtgggcctcaatttttctttatgcacggaggggtagaaacttggccaatagttcta gctctcttaagcagcttctgccacctgtcctgcaggtgatccttgaggctcttcgggacggctttctggggagcatagct gtggatgacatcacggtgacgtctggagcctgcctggcccagcaccactgctcctttgaggcagacgaatgcggcttctc ggtccccaagcagcaggcatggcagcggcagagtggcgcagggggctggggcccccctgtggatcacaccattggcgagc cgagagggcactacatgatcctctgcactggtgcggacaagctcccttcggggcaggtgaccgtcctgcgctctcgcgcc ttccctcctctgctccgcacccactgcgtctccttttggtactacctgagcggcagtgatccaggatccttgaccgctta cgtggaggaggaagagaaggaagaggaagcggagatggggatgttcagcctggatcagacacagggggcagcctggcggt acggcagctttgtggcaaaagtccacgggagatggcaggtggccttcgcggtgggaggtgctggcggagggccggcctct tacattgccctcgatgacatctttgtgagggaaggcggctgctctgaaccagggtcttgtgacttcgagtcaggcccctg tggctggagcaagccccacggaaactggtacagctgggactggaaggaagcagccaccacgttgcgctccccatctccca aggaagaccacaccctgggcaccaacgcaggtcactatgcttacgttgacctggcagtgctgagcttgggaaagagcaca gcacgcttggcgagtgagcccctggcacccaccacaggctcctgcctgcggttccactaccacatggacttccttgggca cagctctcctgcagagctcagggtgaggctgactggggcgcagggggaaagggtgatctggaccgccacaggccatcaga gctggacttggatgaaccaaacgctcctggtgaccagcctcgtggagttccagattgtcctggaggccagcagtggagcc tgggtgagctcaggggtgattgcgctggacgatctccactacgcagctgggccggactgtgcctccccccaggcagggca agcggaagagagcagcagcagcagccctctcccagtgtcgaccatcggagtggtggctggtgtggtgagcaccgtcctgc tgctgctgctgcttgcggccacctgttgcctgtggaagaggagagggagtcgggagaggatggaggaggagcacggcaac gggcagggttttgacaacatcgcctttcgagacgacagaattatcctaccccggatggctcctaacccagcagcatccta ggttggcccctgccagccccatccggccttgcagcggcctctgttcctctggagaggcaacaggagccgtcccttcggac tccaaggggacatcctcgagacctgggttgaatcagcctcttttcttgaccagagatagccagattgttcacgaaggttg gcatgttcactctatggctactcaaaaagcatttcaacgagaaagttaaaataaacccactccccataggagtatcg |
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| Transcript ID | habu1_s6078_g16656.t3 |
| Definition | - |
>habu1_s6078_g16656.t3 ggtgtgcttgctagattggcacgcagctgccgttctcttgcttttattgccccatgaatgtgtccaggccgttgggaccc tctttgcactgaaggtgggtgggagtattctgcccacgtccccctccctatggccagtccccaccctgtgcctgggcagt gcttccctcctgctcggcccctgccgcgtgtctggaaggcaaggtgatcggggaggttgaagtccaggcacattgttgct ggagcagcctttccttcttctcaactgagcaggcttgatctagctgctggcccaggatgccgggatcctgggggctgctg tccttcctgctcctgctgatgctgatggttgggcctccgttttatgtccaggctgtgtttgtcaaccgatgtgggagtcc acgtgtctgtgattttgtgtgtgattgctgggattgttcagatgaaaaccaatgtggctaccagaaggcatcggctctgg gggctcccttcacctgcagcttcgaaggcaccatgtgtggctgggaggacatcagtaacacagcctaccggtgggaccca gcccaggccagcatctccacggggctgcagcttcctttcgaccacacgctgggcacggatttgggctggtacatggcggc gacaaagcagagagcaaagccctcgggcacggctcggctgaggtcccccctgttgcaaggagcagctgctgcctgcgaga tccgagcgtggtatcacctgtggggatcaggtcttaacgagactcagcagcctctcctgaccttggagctgagacaggga aatcgcaccgtccgcctgtggcaaagccctcccgggggcacctactcctggcaggagctggtggcctacaccggtcacat cccgggcagcttccaggtcaccttctccgctgtccagggctcctcctccacagcacagctggccctggacgatgtggaat tccggaactgcggcttcccacgtccccagacctgtggcccagaggccttccactgccagcagggcggctgcattgcgaaa gaccgggtgtgtgacggcaccgccgattgcagggctggtgaggatgaagccactgctgactgtgcctccttcgcagcgtg ctcctttgagggggactggtgccagtggacggtggtccccaatgccactcttccctggctaaggaacgccagcctccacc tggcctcgccttcggtgtggccttcgcgggatcacagcaccaacagccgggaaggcttcttcgcctacgtcgagactcag aagccgaacctgcacgagggaagagcatggctgagcagcccaatgctggccccggacgccccccagccctgctacctggt tctctacctccacctgcatggctcaagcagcaacagccttaatgtctacagccagacggcagacgctttgcggcttgtct ggagccgcacaggagacttgggcaactactggttccgggagaaagtggatttcacggaggcaaagaagttcaagatcatc atcgagggcaggattggaagcgggcacaaagggagcatcgctctggatgaccttcgtctttctcctcactgcagggcggt gcaggacgcccagctcccgcctccccccgtgctgcagccctccagcccttgccccggggggcagtttgcgtgtgaccagg gcaagcgatgcctcgacttccagctgctctgtaacttcaaggccgaatgtgaggacgcctctgacgagcagcagtgtgga atgaccgattttgccaaggaccccgggggctggatggacatcagcgtgggccgcctgcgatggaccgccagccagctcag tcctgtggggcccgttttcggtctgcaggaggggccggggcagatgttctctatggcgcgggctgccactcccgtgttgg gcccttcaggtgtaggctgtgtactgcagatggatttcaccactggcccagaaggcttcctcgcccttgccattgccgat gagagcctgggcacccactggtgggcttggtttgcccggagcaacgggaccgcttcctgggcagaggccacggtccctct gggcgcaaggagaaggcctttccagcttgagctgctggccatgaagggtctcgatggcccccggggacccctgccacttg ccgtcagcaatatctcctttgtgaactgcagtaccggagccccagcctcagccccccaggcagggctgtcctgcaatttt gagaccgactggtgtggctggtatctggagcagaacgacggctttgaatggaggctgagcagaagccgaggaggggccgt ggaccacaccacaggcacaggctctttcctgtttgtggatcctggtggaccctggaatccaggctggcgtgcccggctcg tttctgctccccaggcgactgctgccaccgctgtcgagacctcctgtctttccttctggtatcgcatggatggcccccag attgggaccctggccctgaaagtgaaggaggccggagaatcgggggagcaggtgctttggaccagaacagggagccacgg ggcggtttggcatcgagccgcctcctccatttcccccaagcctggtcagaagtatcaggtaaaaagagggggcctctcct ttgcacaacgcagacccagaccaaggtgctgatttcgggaacacctggaaagaaagctgctctcgggaagagctaggctg aggcggcctcctcctggtcagccaggcagcccccccacactggcatggccctcggctttaggatggtggccggcaggtta ggacagcctgccctagtccggctccagctttggattggattggcaccggtgagcttctggggcatcctctgtgccctccc cacccccagcagcctcggaataaataatccccttttctgtgtcaag |
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Protein
| Protein ID | habu1_s6078_g16656.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16656.t1 MPGSWGLLSFLLLLMLMVGPPFYVQAVFVNRCGSPRVCDFVCDCWDCSDENQCGYQKASALGAPFTCSFEGTMCGWEDIS NTAYRWDPAQASISTGLQLPFDHTLGTDLGWYMAATKQRAKPSGTARLRSPLLQGAAAACEIRAWYHLWGSGLNETQQPL LTLELRQGNRTVRLWQSPPGGTYSWQELVAYTGHIPGSFQVTFSAVQGSSSTAQLALDDVEFRNCGFPRPQTCGPEAFHC QQGGCIAKDRVCDGTADCRAGEDEATADCASFAACSFEGDWCQWTVVPNATLPWLRNASLHLASPSVWPSRDHSTNSREG FFAYVETQKPNLHEGRAWLSSPMLAPDAPQPCYLVLYLHLHGSSSNSLNVYSQTADALRLVWSRTGDLGNYWFREKVDFT EAKKFKIIIEGRIGSGHKGSIALDDLRLSPHCRAVQDAQLPPPPVLQPSSPCPGGQFACDQGKRCLDFQLLCNFKAECED ASDEQQCGMTDFAKDPGGWMDISVGRLRWTASQLSPVGPVFGLQEGPGQMFSMARAATPVLGPSGVGCVLQMDFTTGPEG FLALAIADESLGTHWWAWFARSNGTASWAEATVPLGARRRPFQLELLAMKGLDGPRGPLPLAVSNISFVNCSTGAPASAP QAGLSCNFETDWCGWYLEQNDGFEWRLSRSRGGAVDHTTGTGSFLFVDPGGPWNPGWRARLVSAPQATAATAVETSCLSF WYRMDGPQIGTLALKVKEAGESGEQVLWTRTGSHGAVWHRAASSISPKPGQKYQVILEALRDGFLGSIAVDDITVTSGAC LAQHHCSFEADECGFSVPKQQAWQRQSGAGGWGPPVDHTIGEPRGHYMILCTGADKLPSGQVTVLRSRAFPPLLRTHCVS FWYYLSGSDPGSLTAYVEEEEKEEEAEMGMFSLDQTQGAAWRYGSFVAKVHGRWQVAFAVGGAGGGPASYIALDDIFVRE GGCSEPGSCDFESGPCGWSKPHGNWYSWDWKEAATTLRSPSPKEDHTLGTNAGHYAYVDLAVLSLGKSTARLASEPLAPT TGSCLRFHYHMDFLGHSSPAELRVRLTGAQGERVIWTATGHQSWTWMNQTLLVTSLVEFQIVLEASSGAWVSSGVIALDD LHYAAGPDCASPQAGQAEESSSSSPLPVSTIGVVAGVVSTVLLLLLLAATCCLWKRRGSRERMEEEHGNGQGFDNIAFRD DRIILPRMAPNPAAS |
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| Protein ID | habu1_s6078_g16656.t2 |
| Definition | - |
>habu1_s6078_g16656.t2 MILCTGADKLPSGQVTVLRSRAFPPLLRTHCVSFWYYLSGSDPGSLTAYVEEEEKEEEAEMGMFSLDQTQGAAWRYGSFV AKVHGRWQVAFAVGGAGGGPASYIALDDIFVREGGCSEPGSCDFESGPCGWSKPHGNWYSWDWKEAATTLRSPSPKEDHT LGTNAGHYAYVDLAVLSLGKSTARLASEPLAPTTGSCLRFHYHMDFLGHSSPAELRVRLTGAQGERVIWTATGHQSWTWM NQTLLVTSLVEFQIVLEASSGAWVSSGVIALDDLHYAAGPDCASPQAGQAEESSSSSPLPVSTIGVVAGVVSTVLLLLLL AATCCLWKRRGSRERMEEEHGNGQGFDNIAFRDDRIILPRMAPNPAAS |
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| Protein ID | habu1_s6078_g16656.t3 |
| Definition | - |
>habu1_s6078_g16656.t3 MPGSWGLLSFLLLLMLMVGPPFYVQAVFVNRCGSPRVCDFVCDCWDCSDENQCGYQKASALGAPFTCSFEGTMCGWEDIS NTAYRWDPAQASISTGLQLPFDHTLGTDLGWYMAATKQRAKPSGTARLRSPLLQGAAAACEIRAWYHLWGSGLNETQQPL LTLELRQGNRTVRLWQSPPGGTYSWQELVAYTGHIPGSFQVTFSAVQGSSSTAQLALDDVEFRNCGFPRPQTCGPEAFHC QQGGCIAKDRVCDGTADCRAGEDEATADCASFAACSFEGDWCQWTVVPNATLPWLRNASLHLASPSVWPSRDHSTNSREG FFAYVETQKPNLHEGRAWLSSPMLAPDAPQPCYLVLYLHLHGSSSNSLNVYSQTADALRLVWSRTGDLGNYWFREKVDFT EAKKFKIIIEGRIGSGHKGSIALDDLRLSPHCRAVQDAQLPPPPVLQPSSPCPGGQFACDQGKRCLDFQLLCNFKAECED ASDEQQCGMTDFAKDPGGWMDISVGRLRWTASQLSPVGPVFGLQEGPGQMFSMARAATPVLGPSGVGCVLQMDFTTGPEG FLALAIADESLGTHWWAWFARSNGTASWAEATVPLGARRRPFQLELLAMKGLDGPRGPLPLAVSNISFVNCSTGAPASAP QAGLSCNFETDWCGWYLEQNDGFEWRLSRSRGGAVDHTTGTGSFLFVDPGGPWNPGWRARLVSAPQATAATAVETSCLSF WYRMDGPQIGTLALKVKEAGESGEQVLWTRTGSHGAVWHRAASSISPKPGQKYQVKRGGLSFAQRRPRPRC |
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