Gene
| Gene Model ID | habu1_s6078_g16659 |
|---|---|
| Locus | habu1_scaffold6078 : 100594 ... 108495 : - |
| To GenomeBrowser | habu1_scaffold6078:100594..108495 |
| Genes list of scaffold | habu1_scaffold6078 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6078_g16659.t1 | 1 | 1 | Arf | 38 | 102 | 2.8e-06 | 26.6 | 3.7e-09 | 9.2e-06 | 25.0 |
| habu1_s6078_g16659.t1 | 2 | 1 | Ras | 45 | 100 | 1.1e-12 | 47.6 | 2.0e-09 | 5.0e-06 | 25.9 |
| habu1_s6078_g16659.t1 | 1 | 1 | Miro | 45 | 179 | 2.4e-09 | 37.6 | 6.3e-12 | 1.6e-08 | 35.0 |
| habu1_s6078_g16659.t1 | 2 | 2 | Ras | 136 | 218 | 1.1e-12 | 47.6 | 2.5e-07 | 0.00061 | 19.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6078_g16659.t1 | gi|602640621|ref|XP_007427118.1| | PREDICTED: rab-like protein 6 [Python bivittatus] | 0.0 |
| habu1_s6078_g16659.t1 | gi|591386636|ref|XP_007067738.1| | PREDICTED: rab-like protein 6 [Chelonia mydas] | 0.0 |
| habu1_s6078_g16659.t1 | gi|641777963|ref|XP_008172029.1| | PREDICTED: rab-like protein 6 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s6078_g16659.t1 | gi|558135777|ref|XP_006117407.1| | PREDICTED: rab-like protein 6 isoform X1 [Pelodiscus sinensis] | 0.0 |
| habu1_s6078_g16659.t1 | gi|558135781|ref|XP_006117408.1| | PREDICTED: rab-like protein 6 isoform X2 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 12.2 |
| Venom grand-1 | 17.2 |
| Pit, infrared sensing | 13.7 |
| Nose | 14.1 |
| Brain-1 | 9.9 |
| Eye | 12.3 |
| fetal fibroblast | 27.3 |
| venom gland-2 | 22.6 |
| Brain-2 | 11.8 |
| Spleen | 13.0 |
| Lung | 16.6 |
| Liver | 17.0 |
| Kidney | 19.9 |
| Pancreas | 14.4 |
| Small intestine | 14.6 |
| Large intestine | 13.2 |
| Stomach | 11.3 |
| heart | 10.7 |
| ovary | 22.7 |
| cheek muscle | 12.2 |
Transcript
| Transcript ID | habu1_s6078_g16659.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16659.t1 cgtcggcgccgccttcctggttgctcggcgagggaaagggaagatggcggcggcggcagcggaggcgcccgcctttcaag caactccggctgccccgacggggacggcggctccggggaccgcgcggaggccggcggctcagcggccgcgggcggagaag taggcggcttcgccggcccgggcgcagcgaccgcggaacgccggtccgcgcctcacgatgctgtcggccttgaagaagct ggtgggctccgagcaggccccggggcgggacaggcccatcccggcggggctgcagtccatgaatcaggcgctgcagcggc gtttcgcgaaaggcgtccagtataacatgaaaattgtcatccgaggtgacagaaacacggggaagaccactttgtggcat cggctgcaaggaaagaaatttgttgaggaatatatcccaacccaggagatccaagtcaccagcatccattggaattataa gactactgatgatattgtgaaggttgaagtctgggatgtggtagacaaaggcaagtgcaaaaaacggggagatgggttga agctggacaacgatcctcaggaggcagaatccgagatggccttggatgcggaattcctggatgtatataagaactgcaac ggtgtcgtgatgatgtttgatatcaccaagcagtggaccttcaactacatcctgagagaacttccaaaagtcccaaccca tgtaccagtgtgtgtgcttgggaattaccgggacatgggcgaacaccgggtgatcctgcctgatgatgtgcgggaattca ttgacaacctggacaggccccccggctcctcctactttcgttatgccgagtcttccatgaagaacagttttggcctcaaa tacctgcacaaattcttcaatatccccttcttgcagctacagcgggagactctgctgcggcagctggagaccaatcagct ggatattgacgccaccttggaggaactctctgtgcagcaggagaccgaagaccagaactacgagctgttcctcgaagtga tggaagctcgtggccggggacatgcctctcctttggccaccaatggacagaccgtttcctcaggttcccagtctccggtg gttccacctggcaatgcttcggggggctccagccccggcaccccccagcagagcttggccaaccctggccttgccacgga ccctgctgagcctccagagccagggctgctgcctgaaacccagcctcctgcagtcattcctgcaccagctgcgccacaga aacgtggcatcatcgctcggctctttggcacctccccagctcccgagactggtcctccctctccagatcctgccgttcct gccctccctgcagttgctccctcgaaagtccagagcgtagaagactttgtccccgaggacagcctggatcgcagcttcct ggaagaccccatcctgcagagagacaagagggggaaacaggcagcaaaggcccccaccgacagtgacagtgacagagatg ctcctggtgggaaccccttggttgctggcttccaggatgacctggaccttgatgagcgtctgtccagcaagcccccgtta gcagcagagctggtcccgagcaaaaacgtgaacctgtcaagcgaggaagaagaatcctccaagttctccatcatgggggc tgaagatgctgggtcagaacaagaaaaaaaaagagcttccaaaaaggccttgaaactcccagagccctcggcgcctccca gatctgcggagctgaaatctctcaccagccaacctccagctgagccaagcaaacgcttgatggcagccagcggccctgag gcctgtccgcccccagcgccctctgcctccaagcagcaggactccgagagcgactcggaggggccctttgccacgcagat gctctcctttgtgatggatgatcccgactttgaaagcgaggagtcagagagccaaaggaagcgcccagaggaatttccag tgcgagaggacctgtcagacctctccgaggaggaccccccttccagacctccccagctgcccagacccgtcatccgctcc ttcaggttgaaggacgaggccgatctctttgggttgggcctggataagccgcttggccgagacagcagcgaggaagataa agagaagcagtctttgaaggagaaaaagaaaaaaaagaagagaactggcaaagaggaagaaacagagaaaatttcaggga ggaaaaagagcaagccgaaaaagagcaggggggagaaggaggaggaggaggaggaggaagacagaggagaaaaggagaag aagccgcccaagcagcagcaccagcggagcaaagccaaggccagcaggatcgatgagctggaggcctttctcgggggcgg tgctggggccagcaagcagcgggcgggtggagactacgaggagctgtagccccccccagccaggtatggattgaagtggg gctgttttaacattcctcccctctgcgccctcccccctttggggaaatgcactggtcatccttgacctctagcagcctgc atggcacaggtagtgctctcagggcctctggcctccctccttgccctccatggggggagggtgtgcatgacaaacctact cttgacctcttgcccctctcccaagcctcccagcccccttcctcttcccccccccacattctcccaccatccccaggagc ctagtctctggaatgcagctggcaacagagacttgtgctgttcgcctcctttttcttttactccccttttctctttgctt ttgggaaaaacagtcccagtgatgctctcctcattccagctgataaagctcttggttgtacaactgtgt |
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Protein
| Protein ID | habu1_s6078_g16659.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16659.t1 MLSALKKLVGSEQAPGRDRPIPAGLQSMNQALQRRFAKGVQYNMKIVIRGDRNTGKTTLWHRLQGKKFVEEYIPTQEIQV TSIHWNYKTTDDIVKVEVWDVVDKGKCKKRGDGLKLDNDPQEAESEMALDAEFLDVYKNCNGVVMMFDITKQWTFNYILR ELPKVPTHVPVCVLGNYRDMGEHRVILPDDVREFIDNLDRPPGSSYFRYAESSMKNSFGLKYLHKFFNIPFLQLQRETLL RQLETNQLDIDATLEELSVQQETEDQNYELFLEVMEARGRGHASPLATNGQTVSSGSQSPVVPPGNASGGSSPGTPQQSL ANPGLATDPAEPPEPGLLPETQPPAVIPAPAAPQKRGIIARLFGTSPAPETGPPSPDPAVPALPAVAPSKVQSVEDFVPE DSLDRSFLEDPILQRDKRGKQAAKAPTDSDSDRDAPGGNPLVAGFQDDLDLDERLSSKPPLAAELVPSKNVNLSSEEEES SKFSIMGAEDAGSEQEKKRASKKALKLPEPSAPPRSAELKSLTSQPPAEPSKRLMAASGPEACPPPAPSASKQQDSESDS EGPFATQMLSFVMDDPDFESEESESQRKRPEEFPVREDLSDLSEEDPPSRPPQLPRPVIRSFRLKDEADLFGLGLDKPLG RDSSEEDKEKQSLKEKKKKKKRTGKEEETEKISGRKKSKPKKSRGEKEEEEEEEDRGEKEKKPPKQQHQRSKAKASRIDE LEAFLGGGAGASKQRAGGDYEEL |
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