Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s6078_g16660
Locus habu1_scaffold6078 : 109305 ... 115325 : -
To GenomeBrowser habu1_scaffold6078:109305..115325
Genes list of scaffold habu1_scaffold6078

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 5.4
Venom grand-1 8.0
Pit, infrared sensing 4.1
Nose 3.1
Brain-1 3.7
Eye 5.9
fetal fibroblast 0.5
venom gland-2 6.7
Brain-2 3.2
Spleen 4.6
Lung 7.0
Liver 76.0
Kidney 2.7
Pancreas 5.4
Small intestine 1.9
Large intestine 5.4
Stomach 2.1
heart 3.4
ovary 1.5
cheek muscle 0.9

Transcript
Transcript IDhabu1_s6078_g16660.t1
Definition-
>habu1_s6078_g16660.t1
aggagaagcagcactggcggcttcatggctgcggctgcacttctgctctgctcggcttctgcgggcagctctggggctgc
aatggggtggctttgtttttctagcatgaggaaattcgaactttggtctgcgggctgcaccaaaggtgaatggccttgcg
atggatgcggtggcccgagagcctgaagatgggctcccctgcacctcccggttgaatttgagaggggggggccagagaaa
tgtatttggataagggaagggggcttccctcccaccgttccttgccccttcagctgaggcaaggggggtctcgccaagcc
ctgggctgattgcaagacggtaaccgccttttagcagtgggtcctggtgggcagctctccgtcctcgtcctttgcggaag
gcccttcccggagactcttgcttcgatctggactgaccaaaggcatcctgacaccgaggggtctttctgtcagcctgcag
accctcaagccctccctcgctgcctgtgttccttgtcccaggaataattaaccaaagcaaacagtgggagacagcagccc
gcatccaaggttgcaaaccctccaaggttttcagtttggacattgatttctaaacagacaatgttattgcaggccagcag
ccaggattcatcggaagtggccgaaatctgaaatgggctattttcctctggttttgctgtaaacagatctccagcatcgc
tgcctgccggctgaaaggattggcagctcagccagctacacaggaaaccggccgatgtcacagagccccagcagaggctg
cacaaacccaggctggaccgagagggggagcttggctggcacttgctgcctgtctcccttgaagggcagaagaggttttt
ccggagctcggggaggcgcgatccaaaggactcaggatgaggttcaagaggaaaaaagatctgaaggagcaaatccgtga
gctgcagtccatcattcacatccaagaacaagggaggaagctccgcacccaagggagcgaagaggccgtgcgcaagaaca
gggagctgatcggcttcctgcgcaccaccctgcagggagagatgcatgagctgaatctggggctgaagtatgaccacgtc
acgatcagcagggcctgcctggacaggaagcggctgaaaatcgctttggcagaatacactgtggagcaagctcgagagtc
cctgagcaaacggatcttcgaccggatgaacacccacaacgtcctcttgtacgaagtcaagcgccgggggaaacgcctgg
aggagctccagatgacgctgcaggacctcatcgacttggagatggccagtcctgaggtccagctccagctccaaaccatc
cgtcagctggagaacaacatggagaagatgcaggtgaacattgtgacggcagacaaggtccacatcctgtacgtgaagat
gctggacgtgctgagagctgagctttctcagcttccttttgtcctggacaccttggcgcgccgggtgggcacctaccaga
tggagctgcaggggatggacctgatggcaacggatatgcgggaagccacggaggccgccaagatggacatggccaaggca
gaaaatgagttaattgcggagaagaaattccgggaaaactcgctcagtatccagaagaagcagatagagcggatccgcgc
gaaggatgccggtgagaggcaccgtcggacgcaagcccggcgagacatggacttccctgccctgatgatccgtgaaggaa
caaggggggcaaagctggaggcttccaaggcccagattgagtaccagggtctcgtgaccagcgaggtggagaagatcaaa
agtgccgtgcagtgctcacatctctgggatattgctgggcgcttcatggcccagaagaagtctgaggagaaccttcagca
gcagatcaccgaatcagagaagaagcgacgaggcctcaagtcccagctgaaggctctggagctgcagcgagccgagctga
cattccaccagtccccaggcttcctcagctcaaagaagctagaagagaatctgcggaagaacctggaggaggaggaggaa
cagctttcacgggtccatgaccaggcgtccaaaaaccaggagcttctccttcattttgagaatggggtcgacaacctgat
cctcaggctgtgtgacatccgtgtgcctggccaggagggcttccccaagacggaggatgtcttcgagaagctgcagtttt
gtgaaacaaaacttctgcatttgagccgaattatgctcgatttgccctccgacagattcagcccagatgagagcgacgag
acgtttgtccacctccggaatttccttgaggagagcactggggatgaagagcagaacctgcgaatcgctttcaatgagga
cgaagaggatgtccgagaagcctttcactttgcggacatcgaccacagctacgtgcccagtcgggaggagatcaagaagg
agggcctgaagctgattgaggagaagaccaaggtgactaagaaaaagcagagaggggccaagaaatgagagttccaaaaa
cttggcggcccctatttctcggatacggagatttgactctatcctctattttttaatctgtatttgtttaaaatgacatt
gaacctgctttaaacacgcctcctatggaatgtgcaaaagagaagtcttcccatgtttccacaaattaagaataaaggca
aaaagaggttgatgttgg
Transcript IDhabu1_s6078_g16660.t2
Definition-
>habu1_s6078_g16660.t2
aggagaagcagcactggcggcttcatggctgcggctgcacttctgctctgctcggcttctgcgggcagctctggggctgc
aatggggtggctttgtttttctagcatgaggaaattcgaactttggtctgcgggctgcaccaaaggtgaatggccttgcg
atggatgcggtggcccgagagcctgaagatgggctcccctgcacctcccggttgaatttgagaggggggggccagagaaa
tgtatttggataagggaagggggcttccctcccaccgttccttgccccttcagctgaggcaaggggggtctcgccaagcc
ctgggctgattgcaagacggtaaccgccttttagcagtgggtcctggtgggcagctctccgtcctcgtcctttgcggaag
gcccttcccggagactcttgcttcgatctggactgaccaaaggcatcctgacaccgaggggtctttctgtcagcctgcag
accctcaagccctccctcgctgcctgtgttccttgtcccaggaataattaaccaaagcaaacagtgggagacagcagccc
gcatccaaggttgcaaaccctccaaggttttcagtttggacattgatttctaaacagacaatgttattgcaggccagcag
ccaggattcatcggaagtggccgaaatctgaaatgggctattttcctctggttttgctgtaaacagatctccagcatcgc
tgcctgccggctgaaaggattggcagctcagccagctacacaggaaaccggccggtcagcccagatgggattcaggcaga
gccaggagggaccctttcccggccaaggggcttaagcagccgtccacctcggcctcaggcgctctggagaaagccagctc
gaaccaggggctggcagacctccagaagccttggctaagcgcggcccagatggaccgggggacctttcccggcagggatc
aggtggccccctcggtcacacattaggctggccattccccttgctagctgggaatgaccgctctggggcgaagtgtgcgg
gacccctggaccggcccctgcagaagaattggctggctcttcagggcagaattccagccgagagcgtcccgatgggttcc
agggggaatcttcagattgtgatgccttcatgtgacacataaaggcatcgcaatttcccttcagatgtcacagagcccca
gcagaggctgcacaaacccaggctggaccgagagggggagcttggctggcacttgctgcctgtctcccttgaagggcaga
agaggtttttccggagctcggggaggcgcgatccaaaggactcaggatgaggttcaagaggaaaaaagatctgaaggagc
aaatccgtgagctgcagtccatcattcacatccaagaacaagggaggaagctccgcacccaagggagcgaagaggccgtg
cgcaagaacagggagctgatcggcttcctgcgcaccaccctgcagggagagatgcatgagctgaatctggggctgaagta
tgaccacgtcacgatcagcagggcctgcctggacaggaagcggctgaaaatcgctttggcagaatacactgtggagcaag
ctcgagagtccctgagcaaacggatcttcgaccggatgaacacccacaacgtcctcttgtacgaagtcaagcgccggggg
aaacgcctggaggagctccagatgacgctgcaggacctcatcgacttggagatggccagtcctgaggtccagctccagct
ccaaaccatccgtcagctggagaacaacatggagaagatgcaggtgaacattgtgacggcagacaaggtccacatcctgt
acgtgaagatgctggacgtgctgagagctgagctttctcagcttccttttgtcctggacaccttggcgcgccgggtgggc
acctaccagatggagctgcaggggatggacctgatggcaacggatatgcgggaagccacggaggccgccaagatggacat
ggccaaggcagaaaatgagttaattgcggagaagaaattccgggaaaactcgctcagtatccagaagaagcagatagagc
ggatccgcgcgaaggatgccggtgagaggcaccgtcggacgcaagcccggcgagacatggacttccctgccctgatgatc
cgtgaaggaacaaggggggcaaagctggaggcttccaaggcccagattgagtaccagggtctcgtgaccagcgaggtgga
gaagatcaaaagtgccgtgcagtgctcacatctctgggatattgctgggcgcttcatggcccagaagaagtctgaggaga
accttcagcagcagatcaccgaatcagagaagaagcgacgaggcctcaagtcccagctgaaggctctggagctgcagcga
gccgagctgacattccaccagtccccaggcttcctcagctcaaagaagctagaagagaatctgcggaagaacctggagga
ggaggaggaacagctttcacgggtccatgaccaggcgtccaaaaaccaggagcttctccttcattttgagaatggggtcg
acaacctgatcctcaggctgtgtgacatccgtgtgcctggccaggagggcttccccaagacggaggatgtcttcgagaag
ctgcagttttgtgaaacaaaacttctgcatttgagccgaattatgctcgatttgccctccgacagattcagcccagatga
gagcgacgagacgtttgtccacctccggaatttccttgaggagagcactggggatgaagagcagaacctgcgaatcgctt
tcaatgaggacgaagaggatgtccgagaagcctttcactttgcggacatcgaccacagctacgtgcccagtcgggaggag
atcaagaaggagggcctgaagctgattgaggagaagaccaaggtgactaagaaaaagcagagaggggccaagaaatgaga
gttccaaaaacttggcggcccctatttctcggatacggagatttgactctatcctctattttttaatctgtatttgttta
aaatgacattgaacctgctttaaacacgcctcctatggaatgtgcaaaagagaagtcttcccatgtttccacaaattaag
aataaaggcaaaaagaggttgatgttgg

Protein
Protein IDhabu1_s6078_g16660.t1
Definition-
>habu1_s6078_g16660.t1
MRFKRKKDLKEQIRELQSIIHIQEQGRKLRTQGSEEAVRKNRELIGFLRTTLQGEMHELNLGLKYDHVTISRACLDRKRL
KIALAEYTVEQARESLSKRIFDRMNTHNVLLYEVKRRGKRLEELQMTLQDLIDLEMASPEVQLQLQTIRQLENNMEKMQV
NIVTADKVHILYVKMLDVLRAELSQLPFVLDTLARRVGTYQMELQGMDLMATDMREATEAAKMDMAKAENELIAEKKFRE
NSLSIQKKQIERIRAKDAGERHRRTQARRDMDFPALMIREGTRGAKLEASKAQIEYQGLVTSEVEKIKSAVQCSHLWDIA
GRFMAQKKSEENLQQQITESEKKRRGLKSQLKALELQRAELTFHQSPGFLSSKKLEENLRKNLEEEEEQLSRVHDQASKN
QELLLHFENGVDNLILRLCDIRVPGQEGFPKTEDVFEKLQFCETKLLHLSRIMLDLPSDRFSPDESDETFVHLRNFLEES
TGDEEQNLRIAFNEDEEDVREAFHFADIDHSYVPSREEIKKEGLKLIEEKTKVTKKKQRGAKK
Protein IDhabu1_s6078_g16660.t2
Definition-
>habu1_s6078_g16660.t2
MRFKRKKDLKEQIRELQSIIHIQEQGRKLRTQGSEEAVRKNRELIGFLRTTLQGEMHELNLGLKYDHVTISRACLDRKRL
KIALAEYTVEQARESLSKRIFDRMNTHNVLLYEVKRRGKRLEELQMTLQDLIDLEMASPEVQLQLQTIRQLENNMEKMQV
NIVTADKVHILYVKMLDVLRAELSQLPFVLDTLARRVGTYQMELQGMDLMATDMREATEAAKMDMAKAENELIAEKKFRE
NSLSIQKKQIERIRAKDAGERHRRTQARRDMDFPALMIREGTRGAKLEASKAQIEYQGLVTSEVEKIKSAVQCSHLWDIA
GRFMAQKKSEENLQQQITESEKKRRGLKSQLKALELQRAELTFHQSPGFLSSKKLEENLRKNLEEEEEQLSRVHDQASKN
QELLLHFENGVDNLILRLCDIRVPGQEGFPKTEDVFEKLQFCETKLLHLSRIMLDLPSDRFSPDESDETFVHLRNFLEES
TGDEEQNLRIAFNEDEEDVREAFHFADIDHSYVPSREEIKKEGLKLIEEKTKVTKKKQRGAKK

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Okinawa Institute of Science and Technology
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