Gene
| Gene Model ID | habu1_s6078_g16661 |
|---|---|
| Locus | habu1_scaffold6078 : 115596 ... 119018 : + |
| To GenomeBrowser | habu1_scaffold6078:115596..119018 |
| Genes list of scaffold | habu1_scaffold6078 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6078_g16661.t1 | 1 | 1 | Lipocalin | 5 | 107 | 1.2e-14 | 54.5 | 2.3e-18 | 1.7e-14 | 54.0 |
| habu1_s6078_g16661.t1 | 2 | 1 | Kunitz_BPTI | 132 | 184 | 8.1e-29 | 99.5 | 1.4e-22 | 1.0e-18 | 67.2 |
| habu1_s6078_g16661.t1 | 2 | 2 | Kunitz_BPTI | 188 | 237 | 8.1e-29 | 99.5 | 1.9e-14 | 1.4e-10 | 41.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6078_g16661.t1 | gi|602640619|ref|XP_007427117.1| | PREDICTED: protein AMBP-like [Python bivittatus] | 0.0 |
| habu1_s6078_g16661.t1 | gi|637373686|ref|XP_008122545.1| | PREDICTED: protein AMBP-like [Anolis carolinensis] | 0.0 |
| habu1_s6078_g16661.t1 | gi|641778017|ref|XP_008172052.1| | PREDICTED: protein AMBP [Chrysemys picta bellii] | 0.0 |
| habu1_s6078_g16661.t1 | gi|543268172|ref|XP_005423839.1| | PREDICTED: protein AMBP-like [Geospiza fortis] | 0.0 |
| habu1_s6078_g16661.t1 | gi|704583898|ref|XP_010189323.1| | PREDICTED: protein AMBP [Mesitornis unicolor] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.4 |
| Venom grand-1 | 0.3 |
| Pit, infrared sensing | 0.4 |
| Nose | 0.3 |
| Brain-1 | 1.3 |
| Eye | 0.3 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.5 |
| Brain-2 | 0.9 |
| Spleen | 0.4 |
| Lung | 7.8 |
| Liver | 2847.3 |
| Kidney | 0.7 |
| Pancreas | 0.5 |
| Small intestine | 3.1 |
| Large intestine | 0.5 |
| Stomach | 2.6 |
| heart | 0.1 |
| ovary | 0.6 |
| cheek muscle | 0.6 |
Transcript
| Transcript ID | habu1_s6078_g16661.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16661.t1 ggacgggcacaaaaacagggatgccaagagccacagaagcaccaacctgtaggagtggaggaaaactccgctgaagaagt ctgctttccgccacaaggcctgcactggacatggttttagcataagcccttttggttgtcctcaccaggtctacgggaag tggtacaccatcgcgctcggcacaacctgcaagtggttgaagaaatataaggagcgctacctgatggggacgctggtggt ggctccaggggacaccagcaacgagctctcggtcacctccacaaggctccggcaaggcacctgcagccaagcggttggag tttaccagaagagcagcacccccgggaaataccattactacaactctagatgggaaacccacattgagggctacgtggct cgcaccaactacgatgagtatgccttcctcgcctggaagaagaacagcagctacggctacaccgtcaccacccaacttta tgggaggagcccccacctgccccaggacctgatagaggccttcagagagttctcgagagaccggaggagcacctgggacg aggaagcaggctctgccgatggttccccatcatttggtgggggcaacagggaagatttctgcctgcagcccaaggacgcc ggcccctgcctggggatggagctgcgctacttctacaacatcacatcccagaactgcgagagattcttctatggcggctg ccggggaaaccaaaacaactttccctctgagcgcggctgcctgcagacctgccggacggaggccgcctgccggctgccca tcgtcccaggagagccctgcaaggacacgttttgggccttcgatgccaagcagggcaagtgcctcaccttccggggctgc ggaggcaacgccaacaagttctacctggagaaggagtgccaggagtactgtggcctcctccccagcgacggggaggagtt cttgcgcccgtccgccctgtgagaggccagcaagcgagaggaggaagcaagaggaccagccccattttcaaagccggttt cctgctggcatcaataaaggctgctgctggaccaaagcgagcctgtctcctcacttcgggaccctccctctccctggcat catccctgggggatttcaggttgctttctcacgtccttccacaatctttcctgcagccctgtttgccccttccttccccc cccccaagggccagctcaggccaaggagtttgcttgccgtggctcctcccatctcaagccccgggccgggaggggtgggg aggggggcttctgccatcctctccctgctggctgtttccccttggaaccagcagcactctctttcccagagttttctttg ggaaggcatccactggcatggagtgccccctgccagtcagccaggagccaaatcctatcaggtgctcgcaggtgtggggg ggtttcgcccctccccatcaattgttgcttttttcagcatgccttcgctccagtcctatcccggggagcgactcttcatg gcaccccagccgccatctcagctgggcactgaggctttggcctgtccagctgctgctccaggcaacatccctggcaggct gggagggggacacacactcccccccacaagcagccagggctacttggtctcctgtgtgggccaagaatagcactagctct ccccaatgtgctcg |
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Protein
| Protein ID | habu1_s6078_g16661.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16661.t1 MGTLVVAPGDTSNELSVTSTRLRQGTCSQAVGVYQKSSTPGKYHYYNSRWETHIEGYVARTNYDEYAFLAWKKNSSYGYT VTTQLYGRSPHLPQDLIEAFREFSRDRRSTWDEEAGSADGSPSFGGGNREDFCLQPKDAGPCLGMELRYFYNITSQNCER FFYGGCRGNQNNFPSERGCLQTCRTEAACRLPIVPGEPCKDTFWAFDAKQGKCLTFRGCGGNANKFYLEKECQEYCGLLP SDGEEFLRPSAL |
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