Gene
| Gene Model ID | habu1_s6078_g16664 |
|---|---|
| Locus | habu1_scaffold6078 : 164696 ... 169097 : + |
| To GenomeBrowser | habu1_scaffold6078:164696..169097 |
| Genes list of scaffold | habu1_scaffold6078 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6078_g16664.t2 | 2 | 1 | DUF2475 | 13 | 71 | 1.4e-24 | 86.1 | 7.0e-22 | 1.0e-17 | 64.0 |
| habu1_s6078_g16664.t2 | 2 | 2 | DUF2475 | 313 | 344 | 1.4e-24 | 86.1 | 6.8e-08 | 0.001 | 19.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6078_g16664.t2 | gi|532102848|ref|XP_005337031.1| | PREDICTED: protein FAM166A [Ictidomys tridecemlineatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.5 |
| Venom grand-1 | 0.3 |
| Pit, infrared sensing | 0.4 |
| Nose | 0.5 |
| Brain-1 | 0.2 |
| Eye | 0.3 |
| fetal fibroblast | 0.2 |
| venom gland-2 | 1.2 |
| Brain-2 | 0.1 |
| Spleen | 0.4 |
| Lung | 0.5 |
| Liver | 0.1 |
| Kidney | 0.7 |
| Pancreas | 0.8 |
| Small intestine | 0.1 |
| Large intestine | 1.1 |
| Stomach | 0.5 |
| heart | 0.4 |
| ovary | 0.8 |
| cheek muscle | 0.2 |
Transcript
| Transcript ID | habu1_s6078_g16664.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16664.t1 ggtcccggcccgcccaagcccgccgagcagcgccgacccaccatgacagccgcccagaagtgcagcttcttcccccagga tccctactacatccctggatacgggggcttttacccccaggtccgctaccatgttgggcaaagctatggcagaaccacct ccaggatgctgaccgaccctgaggtccgcaagagcccgtgctccgttctcacacctttgaggagacccaagttcacggaa gacttcagccagcagaaactccctgcaccagacaggatggatcagggccagctgtacatcccgggatacacaggccaaga cttccggccccctttgccaagggtccttcccctgcctgaccttcctccatggacacaggcccatccagcaccactggcag ctcagagaaaggtcatcccctgtcatcccggcatccggctggcttgtgggccagggtggaggcagtttgcagccacagcc agctcacggctggtctccccaaaaggcgaggaaaggtttctctgccatccggacattgccctggtgtgtggtcaggagga gcgtcgaggaccttgcaaggctggcatgtctttggtatgcgggcagggctggagggggcctccttgctgcgcaggaactg atcagccaaccaggacggaaggagtgcctctgccactggcaacagaaacggtgaatgtcaggcgatttgaccggaccccc aggctggatctgcccaacctcattcaacgaaaagccatctcaggatatgctggatttatcccatgcttcacctggattat gggagtcaactacctgaaaggagtgaaagatgccatgaacaattttgatagaaaccaggaaaggctgagaaaccccatgt atagttttggacagcgcctgccccacacttattggcccaacacaaagatctacaacagcaaaggcctggttccattctac accggatttgtgccaactatccgtgaaaattatgccctaacttttggtaacagcacccggaaagcttactacgatgaagt acagcggagacaacatacaggatgaaaatgtttttaatgtacagcatcagacaagtgacataaacatgacgcagcacaca taaacagaggtcttgagcaaataaaagtttgtgacacctttgaacag |
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| Transcript ID | habu1_s6078_g16664.t2 |
| Definition | - |
>habu1_s6078_g16664.t2 ggtcccggcccgcccaagcccgccgagcagcgccgacccaccatgacagccgcccagaagtgcagcttcttcccccagga tccctactacatccctggatacgggggcttttacccccaggtccgctaccatgttgggcaaagctatggcagaaccacct ccaggatgctgaccgaccctgaggtccgcaagagcccgtgctccgttctcacacctttgaggagacccaagttcacggaa gacttcagccagcagaaactccctgcaccagacaggatggatcagggccagctgtacatcccgggatacacaggatttga atcctacagaggttgctttcctattccaggccaagacttccggccccctttgccaagggtccttcccctgcctgaccttc ctccatggacacaggcccatccagcaccactggcagctcagagaaaggtcatcccctgtcatcccggcatccggctggct tgtgggccagggtggaggcagtttgcagccacagccagctcacggctggtctccccaaaaggcgaggaaaggtttctctg ccatccggacattgccctggtgtgtggtcaggaggagcgtcgaggaccttgcaaggctggcatgtctttggtatgcgggc agggctggagggggcctccttgctgcgcaggaactgatcagccaaccaggacggaaggagtgcctctgccactggcaaca gaaacggtgaatgtcaggcgatttgaccggacccccaggctggatctgcccaacctcattcaacgaaaagccatctcagg atatgctggatttatcccatgcttcacctggattatgggagtcaactacctgaaaggagtgaaagatgccatgaacaatt ttgatagaaaccaggaaaggctgagaaaccccatgtatagttttggacagcgcctgccccacacttattggcccaacaca aagatctacaacagcaaaggcctggttccattctacaccggatttgtgccaactatccgtgaaaattatgccctaacttt tggtaacagcacccggaaagcttactacgatgaagtacagcggagacaacatacaggatgaaaatgtttttaatgtacag catcagacaagtgacataaacatgacgcagcacacataaacagaggtcttgagcaaataaaagtttgtgacacctttgaa cag |
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Protein
| Protein ID | habu1_s6078_g16664.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16664.t1 MTAAQKCSFFPQDPYYIPGYGGFYPQVRYHVGQSYGRTTSRMLTDPEVRKSPCSVLTPLRRPKFTEDFSQQKLPAPDRMD QGQLYIPGYTGQDFRPPLPRVLPLPDLPPWTQAHPAPLAAQRKVIPCHPGIRLACGPGWRQFAATASSRLVSPKGEERFL CHPDIALVCGQEERRGPCKAGMSLVCGQGWRGPPCCAGTDQPTRTEGVPLPLATETVNVRRFDRTPRLDLPNLIQRKAIS GYAGFIPCFTWIMGVNYLKGVKDAMNNFDRNQERLRNPMYSFGQRLPHTYWPNTKIYNSKGLVPFYTGFVPTIRENYALT FGNSTRKAYYDEVQRRQHTG |
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| Protein ID | habu1_s6078_g16664.t2 |
| Definition | - |
>habu1_s6078_g16664.t2 MTAAQKCSFFPQDPYYIPGYGGFYPQVRYHVGQSYGRTTSRMLTDPEVRKSPCSVLTPLRRPKFTEDFSQQKLPAPDRMD QGQLYIPGYTGFESYRGCFPIPGQDFRPPLPRVLPLPDLPPWTQAHPAPLAAQRKVIPCHPGIRLACGPGWRQFAATASS RLVSPKGEERFLCHPDIALVCGQEERRGPCKAGMSLVCGQGWRGPPCCAGTDQPTRTEGVPLPLATETVNVRRFDRTPRL DLPNLIQRKAISGYAGFIPCFTWIMGVNYLKGVKDAMNNFDRNQERLRNPMYSFGQRLPHTYWPNTKIYNSKGLVPFYTG FVPTIRENYALTFGNSTRKAYYDEVQRRQHTG |
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