Gene
| Gene Model ID | habu1_s6078_g16667 |
|---|---|
| Locus | habu1_scaffold6078 : 178185 ... 182275 : - |
| To GenomeBrowser | habu1_scaffold6078:178185..182275 |
| Genes list of scaffold | habu1_scaffold6078 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| anaphase-promoting complex subunit 2 | GO:0006511 GO:0031461 GO:0031625 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6078_g16667.t1 | 1 | 1 | Cullin | 245 | 485 | 0.0 | 251.4 | 0.0 | 0.0 | 246.4 |
| habu1_s6078_g16667.t1 | 1 | 1 | APC2 | 510 | 570 | 2.2e-23 | 82.2 | 8.8e-27 | 6.5e-23 | 80.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6078_g16667.t1 | gi|591350447|ref|XP_007069760.1| | PREDICTED: anaphase-promoting complex subunit 2 [Chelonia mydas] | 0.0 |
| habu1_s6078_g16667.t1 | gi|641782030|ref|XP_008173530.1| | PREDICTED: anaphase-promoting complex subunit 2 [Chrysemys picta bellii] | 0.0 |
| habu1_s6078_g16667.t1 | gi|514780358|ref|XP_005027598.1| | PREDICTED: anaphase-promoting complex subunit 2, partial [Anas platyrhynchos] | 0.0 |
| habu1_s6078_g16667.t1 | gi|564260528|ref|XP_006269173.1| | PREDICTED: anaphase-promoting complex subunit 2 [Alligator mississippiensis] | 0.0 |
| habu1_s6078_g16667.t1 | gi|701319500|ref|XP_010019389.1| | PREDICTED: anaphase-promoting complex subunit 2, partial [Nestor notabilis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 15.5 |
| Venom grand-1 | 41.0 |
| Pit, infrared sensing | 18.6 |
| Nose | 17.6 |
| Brain-1 | 10.9 |
| Eye | 13.6 |
| fetal fibroblast | 33.6 |
| venom gland-2 | 36.8 |
| Brain-2 | 11.0 |
| Spleen | 18.7 |
| Lung | 19.5 |
| Liver | 30.1 |
| Kidney | 18.6 |
| Pancreas | 28.3 |
| Small intestine | 34.9 |
| Large intestine | 19.6 |
| Stomach | 26.8 |
| heart | 11.2 |
| ovary | 26.8 |
| cheek muscle | 12.1 |
Transcript
| Transcript ID | habu1_s6078_g16667.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16667.t1 gcgccgcttctatgggcgcagcttccgcatctacatgcggcagcgcggcggcggtgtcgaagaggaggcggccggcgcgg gctgcggctgcggggaggagagctgctggtgcccgctggccatggagcagttccagcagctgaacgccatcctccacgag ctggacctgctggagcgggtgagcgccgacgccgtgacccacgtgctgcacgggatgctcgaggagcgcgtagagcggcg ctgccggggcgagtacgagcgctccttcctcgcggagttccaggagtggatcgaaaaggtgattggctggctcagcggca tctttctgcgagagagtgccggggccccgcccagcccggcggccagcagcagtctgaagcggtggcagcgccacgtccag agattcttctaccgcctctacgccgggatgcgcatcgaggagctcttcggcatcatccgcggggtgaacacctcagacat catcaccctttacatctctgccatcaaagccctgcgggagctggattcttccatggtcatcctggaagtggcctgtgagc ccatccgcaaatacctgaggaccagggaggacaccgtgcggcagattgtggcaggtctgacgggggatgcggaggggtca gctgacctggcaaacgagctctccaaagctgacccggtgacgttggagaacggccaggagagcgaggacgacggctccga acctgaggactggctgcccgatccggtggaggccgacccagggaagtccagttccaagcgccgctcctcggacatcatca gcctgctggtgagcatctatggcagcaaagacctcttcatcaatgagtaccgcacgcttcttgctgaccgcttgctgcac caattcagttacagtgccgagagggaaatccgaaacgtggaactgctgaagctgcgttttggagaggcccagatgcacta ctgcgaagtcatgctaaaagacatggcggactctcgacgcatcaatgcaaacattcgtgatgaggagcagaagctgcctg agcaggaaaggccccccttcagccttgtggccatcatcctctccagtgagttctggcccccactgaaggaggagaagctg gagctcccagggcagatcaaggaggccatggaggcctacgcaaagaagtacgaaaagctgaaggccatgaggaccttgaa ctggaagcatcacctgggcttggtgaacctggaggtggagttggcggaccgcacactctccttgtctgtgtcgccggtgc atgcagctgtcatcctgcacttccagggcaaaagcacatggaccttggaggagctgagtgaagctctgaaggtgccagca gcctccctgaggcgcaagatgaccctctggctgcagcaaggggtgctgcgggaggagccccctgggaccttcacggtgat cgaggaggagctgaaggaccaggccgagaaggtggtgctgatcgatagcgatgaggaaggggattcagccatggcctctc aggcggaccagaaggaggaggagctgcagctcttttggacctacatccaggcgatgctgaccaacctggagtctctctcc ctggagcgcatccacagcatgctgaagatctttgtgatgacgggccccatggtgactgagatcgacatccaggagctgca ggtcttcctccagaagaaggtccgggaccagcagctcagctactcggggggtgtctaccgcttgcccaagagttgtaact gagctgtccattccagcacctgatgggctgagagatttgggccaccctcagactctggcctgctgtgctgccttgcctcg tcttggtgcaggtggccactggtgcgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgcacacagcccaaggga ctgctagcaaaacatttgttttgatggatgttctggttcataataaagtggtttccctctgagccattg |
|
Protein
| Protein ID | habu1_s6078_g16667.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16667.t1 MRQRGGGVEEEAAGAGCGCGEESCWCPLAMEQFQQLNAILHELDLLERVSADAVTHVLHGMLEERVERRCRGEYERSFLA EFQEWIEKVIGWLSGIFLRESAGAPPSPAASSSLKRWQRHVQRFFYRLYAGMRIEELFGIIRGVNTSDIITLYISAIKAL RELDSSMVILEVACEPIRKYLRTREDTVRQIVAGLTGDAEGSADLANELSKADPVTLENGQESEDDGSEPEDWLPDPVEA DPGKSSSKRRSSDIISLLVSIYGSKDLFINEYRTLLADRLLHQFSYSAEREIRNVELLKLRFGEAQMHYCEVMLKDMADS RRINANIRDEEQKLPEQERPPFSLVAIILSSEFWPPLKEEKLELPGQIKEAMEAYAKKYEKLKAMRTLNWKHHLGLVNLE VELADRTLSLSVSPVHAAVILHFQGKSTWTLEELSEALKVPAASLRRKMTLWLQQGVLREEPPGTFTVIEEELKDQAEKV VLIDSDEEGDSAMASQADQKEEELQLFWTYIQAMLTNLESLSLERIHSMLKIFVMTGPMVTEIDIQELQVFLQKKVRDQQ LSYSGGVYRLPKSCN |
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