Gene
| Gene Model ID | habu1_s6078_g16677 |
|---|---|
| Locus | habu1_scaffold6078 : 246056 ... 249008 : + |
| To GenomeBrowser | habu1_scaffold6078:246056..249008 |
| Genes list of scaffold | habu1_scaffold6078 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6078_g16677.t1 | 3 | 1 | LRR_8 | 83 | 141 | 5.0e-23 | 80.6 | 5.4e-11 | 9.9e-08 | 31.6 |
| habu1_s6078_g16677.t1 | 3 | 2 | LRR_8 | 109 | 164 | 5.0e-23 | 80.6 | 4.5e-11 | 8.4e-08 | 31.8 |
| habu1_s6078_g16677.t1 | 1 | 1 | LRR_9 | 127 | 216 | 1.4e-07 | 31.2 | 1.0e-10 | 1.9e-07 | 30.8 |
| habu1_s6078_g16677.t1 | 3 | 1 | LRR_4 | 130 | 169 | 3.6e-09 | 36.0 | 3.6e-06 | 0.0067 | 16.0 |
| habu1_s6078_g16677.t1 | 3 | 3 | LRR_8 | 153 | 211 | 5.0e-23 | 80.6 | 1.9e-14 | 3.5e-11 | 42.6 |
| habu1_s6078_g16677.t1 | 3 | 2 | LRR_4 | 153 | 194 | 3.6e-09 | 36.0 | 2.3e-07 | 0.00043 | 19.8 |
| habu1_s6078_g16677.t1 | 3 | 3 | LRR_4 | 178 | 212 | 3.6e-09 | 36.0 | 1.9e-06 | 0.0035 | 16.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6078_g16677.t1 | gi|602645168|ref|XP_007429026.1| | PREDICTED: leucine-rich repeat-containing protein 26 [Python bivittatus] | 0.0 |
| habu1_s6078_g16677.t1 | gi|637369437|ref|XP_008121762.1| | PREDICTED: leucine-rich repeat-containing protein 26 [Anolis carolinensis] | 0.0 |
| habu1_s6078_g16677.t1 | gi|696980454|ref|XP_009559034.1| | PREDICTED: leucine-rich repeat-containing protein 26-like [Cuculus canorus] | 0.0 |
| habu1_s6078_g16677.t1 | gi|513211927|ref|XP_004945818.1| | PREDICTED: leucine-rich repeat-containing protein 26 [Gallus gallus] | 0.0 |
| habu1_s6078_g16677.t1 | gi|697455152|ref|XP_009666393.1| | PREDICTED: leucine-rich repeat-containing protein 26 [Struthio camelus australis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.3 |
| Venom grand-1 | 8.8 |
| Pit, infrared sensing | 0.5 |
| Nose | 0.8 |
| Brain-1 | 0.1 |
| Eye | 0.5 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 22.1 |
| Brain-2 | 0.1 |
| Spleen | 0.2 |
| Lung | 1.5 |
| Liver | 0.4 |
| Kidney | 0.2 |
| Pancreas | 1.1 |
| Small intestine | 0.6 |
| Large intestine | 3.7 |
| Stomach | 1.1 |
| heart | 0.4 |
| ovary | 0.0 |
| cheek muscle | 0.3 |
Transcript
| Transcript ID | habu1_s6078_g16677.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16677.t1 ctcgaagcgggggagctgaggagccaatggggagcctctccgagggtgggcggcccgagagacccgtggcctcagctttg ctcttgccagccatcgatcgtcgctgcttccctggtggccgaaggcgaagagccctcatagtcctcgccatcctcctctc cttgccatgctttcctgcttctggctgcccagatgtttgcagctgctccttggggaaagtaaactgtgtggaccgtgggc tgcgttttgtacctctccagttgcccacaaacgccaccgccctctcgctggaccacaaccagattgtcagcctcccgaac ggcacctttacagcccagaaagtcttgctccgcctgagccttcgcagcaacgtcctgggcagcgttcaccgcctggccct ggtgggcctctgtgagctgcaggacctggacctgagtgacaactccctcagcctcctgcaccccgagaccttcctccctg tgccaagactgaggacgctcaaactggggaacaaccagctcctgaggctggagccagagctccccggggccctcccccat ctcagggccctctttgtccacagcaacgcgctggcctccctcccggctggcttcttggaaagcctgccctccttgtctta cctgacccttgaagacaacccctggacctgctcctgcggcatccgccccctcttcctgtggctgctgaagaacagggaca aagttccagaggcgaattcagtgacttgcaaacaccaagcgtccctcgcccagtatcccatcgcggcccttggaaatgaa tcctttgcacgttgtcaggcgccccggatgcatctccccggctatgcgttcttcttcctgatcggcccatctactttcct ggccagcatttgtgtcggcatcctactgggctcgctggcagtggcccgcctgaaactgaggacgacaggctcgtgcattt gaccaagggctctggtgaggggctcagggaccaccctgcagtaagcaggtttccctcccaaacaagcatccttcggcact ctttccccgtgtctctgccagcagaactgcagcataatagctctagaaatcgtttctgtatcaagtgttttgtgcataaa atcccaaatcctctctcagccagtgggtgggtccttgatttgggcttgtacatatctgtctctatccaaggagccaatct aggaaccctggtgtaagagcagtccatatgtgtaaaaaaggtggtccgagggaggaaatgcccgtgcctcttttcccacc gaggtgggcatgaggatcaggcagatgctgccacatcctttccatgtgactcggtggcagactgcatttgtatttcctga aaagaacggtaccctcctcccatttcttgcagtaaagtgccatgcaacaatagtcccttctattccctgcttggtgcctt cacaggttttcctcaaaaagggagataaggtaaaatgaaggctgccaatgcaaggaggactgtggcatctcagtgcccct ggaagcttctctgctgggctctgggctctgtgccctttactctttatacagtgcttagtctggctggcacagccagaggt ccctgttgttcctgatttagtgagtggcagccaggaggcagctgaggggcagcctgtgctgaggacagagcctctttgag gatgcttcccaatgggcagagcagtgctgggctccttgtcctctataaggaaacatctgaacaccaaggtgggttcccct caccacacccggcccttatgaaacacgccgcccatgatgcgcaggcccgggggcttccccttgttcttcctggaaaggga aaggcaagaggtgagccagtcctagtctgggttgggggtgagctggggggggtctgaccatgccgtgtgaagcccagctt gtcaagggaaccggagggccctctgtgcctcccctccttgctggagcctggcccaacaggtactgactgccctggaggga cgggacggctgccggccattggctcgcctacctcggagtggctcagggagcagcccgccttctagactggcagtcagaga acgtccccctgcctcccaataagcactttggttgggctggttggatggggctatgtggcagatgtttgtgtttgttttct gaagccaaaaaatggtgccccttatcggaaacagcaaagctccagctaggccacatcttggcatcagcccttccagccat gatacagatgctgaaatccagtgccttcctggtggtcggagtcatgtgatctgggagatccaatcccatctcctgctttg tctcaccatcatttcttcaggtgggaaaaattaccagaggcccctttcttgttttcccccagaagcaagcgagtaagcaa gccagccaagcctgctttccttccttcctt |
|
Protein
| Protein ID | habu1_s6078_g16677.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16677.t1 MGSLSEGGRPERPVASALLLPAIDRRCFPGGRRRRALIVLAILLSLPCFPASGCPDVCSCSLGKVNCVDRGLRFVPLQLP TNATALSLDHNQIVSLPNGTFTAQKVLLRLSLRSNVLGSVHRLALVGLCELQDLDLSDNSLSLLHPETFLPVPRLRTLKL GNNQLLRLEPELPGALPHLRALFVHSNALASLPAGFLESLPSLSYLTLEDNPWTCSCGIRPLFLWLLKNRDKVPEANSVT CKHQASLAQYPIAALGNESFARCQAPRMHLPGYAFFFLIGPSTFLASICVGILLGSLAVARLKLRTTGSCI |
|