Gene
| Gene Model ID | habu1_s6078_g16679 |
|---|---|
| Locus | habu1_scaffold6078 : 280206 ... 286923 : + |
| To GenomeBrowser | habu1_scaffold6078:280206..286923 |
| Genes list of scaffold | habu1_scaffold6078 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cholesterol desaturase daf-36-like | GO:0051536 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6078_g16679.t1 | 1 | 1 | Rieske | 97 | 188 | 1.5e-17 | 62.9 | 3.6e-21 | 2.7e-17 | 62.1 |
| habu1_s6078_g16679.t1 | 1 | 1 | Rieske_2 | 97 | 184 | 3.4e-07 | 29.9 | 7.9e-11 | 5.8e-07 | 29.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6078_g16679.t1 | gi|557017871|ref|XP_006009329.1| | PREDICTED: cholesterol desaturase daf-36-like [Latimeria chalumnae] | 0.0 |
| habu1_s6078_g16679.t1 | gi|530608033|ref|XP_005295690.1| | PREDICTED: cholesterol desaturase daf-36-like [Chrysemys picta bellii] | 0.0 |
| habu1_s6078_g16679.t1 | gi|573905657|ref|XP_006640549.1| | PREDICTED: cholesterol desaturase daf-36-like [Lepisosteus oculatus] | 0.0 |
| habu1_s6078_g16679.t1 | gi|602645178|ref|XP_007429031.1| | PREDICTED: cholesterol desaturase daf-36-like isoform X1 [Python bivittatus] | 0.0 |
| habu1_s6078_g16679.t1 | gi|602645180|ref|XP_007429032.1| | PREDICTED: cholesterol desaturase daf-36-like isoform X2 [Python bivittatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 6.5 |
| Venom grand-1 | 21.2 |
| Pit, infrared sensing | 11.2 |
| Nose | 11.5 |
| Brain-1 | 3.0 |
| Eye | 8.2 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 29.9 |
| Brain-2 | 2.9 |
| Spleen | 0.2 |
| Lung | 2.7 |
| Liver | 0.1 |
| Kidney | 0.1 |
| Pancreas | 0.7 |
| Small intestine | 0.7 |
| Large intestine | 6.9 |
| Stomach | 1.0 |
| heart | 0.2 |
| ovary | 3.5 |
| cheek muscle | 0.5 |
Transcript
| Transcript ID | habu1_s6078_g16679.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16679.t1 cgccggagggacaaccgaggaggccgggccggggaggaggcgctcgaggagtcattcccgcgcgcctgggatgggccggc cccggcagaagaggctgagacgggccgcccccgacccggcccgagctataagaggcgcgaggacgcgctgcagtcggaca agccaggatgaggctgaggctggtggcgctcctggtgggcgttgtggccgccgccgccctcctcctcctgccgccgccgc cgctcttgctgctgctgctgctgccgccgcccctgctgctggtggccgcggccggcggcggcgcggcgtggctggcgctg cggcccaagtggctgattcgctcgcttgaccaggtgggctacctgactgagcccggctggagccccgcgcagagcgccgg ccggatgcgcaagaaccggcgcgccggccagctgctgccctcttaccccaatggctggttccggctcctgggctcagccg agctggcgcgcggggaggtgcgcaacgtggccgcactgggggaacagtttgccgtgtttcgaggtttggatgggaacgtg tatgttctggatgcttactgcccacacctcggggccaacctcgcaatcggtggccgtgtggtgggcagctgcatcgagtg ccccttccatggctggatgttctctgggaaggacgggagctgcaccaagatcccatatgccaaaagagtgcctgaatttg caacaaccaaagtttggccatcgtgtgaagtgaacaacatgatcctggtgtggtatcattgtgatagcacaagcccagca tggcaagtcgccgagcaggaagaggcatcatcgcccaactgggccttccgggctggaacggagcactttgtcagcgtgca catcgaggaaattccagagaatgccgccgatgcagcccacctttcctttctccatagtccctcagtcatgagtggaaatg acctgcgcttcacagacaaccaccgctgggcctttttcaggcacacctgggaggcagagtggcagcccgagctggagccc aacggacactgttcggtcatgattctgacccaccacgtgctgctctttggcaagcccatcaccttcctagatctgcatgt ttcggccaggcaggtcggtcctgggttggtcatcatggccctcagtcacgctttcctgggcaaggggctgatcattcaga ccgtcacacctctagagccgcttcttcagcatgtggtccaccagatctactacccgcgcaacataccatccttctttgcc aagctggtgctatgggctgagggggtccagtttgagcgggacatgatgatctggaataacaagaggttcctctccaagcc gctgctggtgaaggaagatgccgccatcctgaggcaccggcgctggttctcccagttctacagccagaacagctggaaac ccaaagcccagaaggaccagctggattggtgatgaccccactagccttagggacccccaatactacttcttccacttgca gggtccatgaactctggcgtgtgagagtgaagggtgactcttacgttggggagccaaggaggttcctgccccagagagat gggtgtgaatttggctcagataatactccagaatcagaggcgacggcctgctgaagcatttggactggtgcccctccccc ccaaaaaagactccagcagctgtttttgatgattctcaagagggcaatgggctccttttgcctcttgacaacatggcaaa tataaattgtaccttaggccttgctt |
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Protein
| Protein ID | habu1_s6078_g16679.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16679.t1 MRLRLVALLVGVVAAAALLLLPPPPLLLLLLLPPPLLLVAAAGGGAAWLALRPKWLIRSLDQVGYLTEPGWSPAQSAGRM RKNRRAGQLLPSYPNGWFRLLGSAELARGEVRNVAALGEQFAVFRGLDGNVYVLDAYCPHLGANLAIGGRVVGSCIECPF HGWMFSGKDGSCTKIPYAKRVPEFATTKVWPSCEVNNMILVWYHCDSTSPAWQVAEQEEASSPNWAFRAGTEHFVSVHIE EIPENAADAAHLSFLHSPSVMSGNDLRFTDNHRWAFFRHTWEAEWQPELEPNGHCSVMILTHHVLLFGKPITFLDLHVSA RQVGPGLVIMALSHAFLGKGLIIQTVTPLEPLLQHVVHQIYYPRNIPSFFAKLVLWAEGVQFERDMMIWNNKRFLSKPLL VKEDAAILRHRRWFSQFYSQNSWKPKAQKDQLDW |
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