Gene
| Gene Model ID | habu1_s6078_g16683 |
|---|---|
| Locus | habu1_scaffold6078 : 306926 ... 331292 : + |
| To GenomeBrowser | habu1_scaffold6078:306926..331292 |
| Genes list of scaffold | habu1_scaffold6078 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6078_g16683.t1 | 1 | 1 | PDZ | 18 | 91 | 4.8e-08 | 33.0 | 3.8e-11 | 1.9e-07 | 31.1 |
| habu1_s6078_g16683.t1 | 1 | 1 | RGS | 677 | 792 | 1.1e-36 | 125.5 | 3.60001e-40 | 1.8e-36 | 124.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6078_g16683.t1 | gi|602645204|ref|XP_007429043.1| | PREDICTED: regulator of G-protein signaling 3 isoform X6 [Python bivittatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.2 |
| Venom grand-1 | 5.3 |
| Pit, infrared sensing | 8.0 |
| Nose | 16.2 |
| Brain-1 | 3.4 |
| Eye | 5.2 |
| fetal fibroblast | 0.8 |
| venom gland-2 | 2.9 |
| Brain-2 | 4.8 |
| Spleen | 3.5 |
| Lung | 21.7 |
| Liver | 11.3 |
| Kidney | 17.7 |
| Pancreas | 2.7 |
| Small intestine | 2.9 |
| Large intestine | 8.3 |
| Stomach | 2.5 |
| heart | 6.9 |
| ovary | 1.9 |
| cheek muscle | 2.4 |
Transcript
| Transcript ID | habu1_s6078_g16683.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16683.t1 gggtaaactcagcatgtcggagggatttggaggggaccttcggcctccggaggccacggctcatgcccagcgcccgaaag agggtcctcggtggtgctgctgctgcttcagggggaaagatctctcccactcctcttggttgaggtggcctggcctacct tggaccggagaaggacccagcagcgctgggagctctaaactcttctcacccccaaaatcagcttgcatcacaacggcagg ttgtggctcttcagttcccagacgaaaggaaggcagccccggggaaggtttaagcggccatgaaaagtacagggagacag gctggcttcccctctctgtcccacccaaagaaagggaggcacccgtgcctcagccacactgatgggatgaggtgtgttag ggaggcctttgcatttttattgaacaatgcgcccaagaggcagagaggagtcgatgtgaaattgtgtgctttcattattt ccagtccttttccttcctcacgaatgaacgtgaaaatgtgccccccctccccttccctggtgctgggaaaggcctgctgg tgcttctccaaggactggtgtgtggcagggacagaacgagggctgctggcaggaatctgactctgaactctctcgccttc cttctccctccgagttctcaggaaacctccgggcttatcacaaagccgcacatggctgcagctgcctgggaggtgagggg tggcttcctgccattcttctgtgagctcctgagttcccagggcagccgtggggccaccgaggctgggtcctcctctcact ggtcaggcagagtgggaaatctctctgccttgatgggctggtcataagccccgaggcgtcggacatgagccgtttccacg gactgtgcagagggtgcttggagcggcgctaccagcagattacaatcccacgtgggaagaatggcttcggcttcaccatc tgctgcgactcccctgttcgggtgcaagctgtcgattctggcggcccagcagataaagctggcttgcagcaactggatac ggtccttcggctcaatcagcagcctgtcgaagcctggaaatgcgtagaattggctcatgagattcggaactgtccccagg agatcatcctgcttgtttggcgcattgtgccgcaggttaaacccagcctgccaggggtcacccgccacccctcttgcaaa tccacgtatgatttgcagtctccacccacctggcgggagaagagcagcaccgggcgatcacggccccccgagcaacggca gagctgtcatgtcttgtacgatgggaaccatgagtttgcgctcaacggctgggagcgatacactgagcttggcaaggctc cccagcagcacaccatgcctccgccttcccggcctccttcctccagtggtacagacaagaattacatcatccttacccca cttaatccagggggccagcttctgaggcgagtctgccaggagaataaagctgccggaggcaatgtgtgcaaaggagaatc ttgtgggaagaaatcccggctcatgaagacggtgcagaccatcaagagccacggaagcagcccccggagctgccctctga tggggtcccacatcccaccctccagttacggcacatacgtgacactcgctcccaaagtgctggtgttccccatcttcgta cagcctctggacctttgcagcccagctcggacactgcttttatcagaagagctgcttcttcacgagacgcgaaacaaacc aactgaggtgaccctctttgtttattcagacttattgctcttcacccgggaagaggagcctgggcaatgtaatgtctttc gcaacccgctttatctgaaggatgtctggctgcaagaggattcttctgaagatctgaaattctgcattctttatctggca gaggagctggagtgtgtgctcagcctgcaggctcgctcccacgagcagaagaccagggtgtgctggtgtctgatggacaa catcgtgaagcagcagccaagaacgactccgacagcccctccggcagaaagcaagatgcttgagccaggagctgagaaat taggggcagtgccatctgtggggcaggatgacagccgccgccttgcctatcctgggagagacagctccatagagggggtg acagaggaagctgtggcagacgtccagggcatcgggatggaacaggggaagcggacctgccaccttgagcggaaggaaca ggaagcgctcggcagtggctccgctgcctttgcaatcccaaagttgcaggtggagggggcgtttagccaagacctgacct gcctcaccagcctcaagctcagcggtccaggggaattggctgaagaggaggaagaggacagcagtgaggcccaactggcc aggggcgatcgaaaacgccgcagcttgtttgaaccgtcagtgtgccagccggcctgcagcctgagtgtgcagaactctct gcggcgtcggactcacagcgaaggcagcctgcttcaggagccccgagcgggccactgcttcacctctgacaccagcctga attacaccgagatgcaaggatccacccccggctggacgctgccatctccgcagagcctcaagaaacaccttacgaagaac gggggctccatccaccagctcactctgctcttcgttgggaatcggaagcagcagcaggtgctggatcctgaaggagtttg tgactcaggagcagcccacaagatgaacaaggcaatggccaaagacgtcaagaaccgactggggctctttcggaagcggc atgaagccctggggggccagcctgagaacaaggccgacaaagggatgaagcctctgcggcctcctcccgaagaagctctc aagtggggagactcactggaaaagctgctgcaacataaatatggggtggctgccttccgttctttcctgcacaccgagtt cagtgaggagaacttggagttctggctggcatgtgaggaatacaggaacatcaagtctcaggccaagatgatagccacgg ccaggaagatcttcaccgaatacattgctgtccagtcgtgcaaagaggtcaatttggactcctacacccgggaacacacc aaagagagcttgcaaaacatcagccggggctgctttgatcttgcccagaggcggatttacggcctgatggagaaggactc ctacccccgcttcctgcgctcggagctgtacttggacctcattaacccgaggaaacctagctcttccctgtagaaaagag gctaggtcttcctccaggaaactttaggggagcagtatgtttacaaataattacatttttggctaagggattatctggat aaataaatctgccttcccacccaaaggggccttggggttacagaactaagcagctttaccattccttcttcccaagaacc tgcttttccctctggtacgatgaagtcatagcgcccaaagctgcaaaggagaaggtcttcccttggacgactgtgaagtc cagagacttttcttccacccttccgctgtgctggaggtggctgtgctgcggtgagttcctcctgcacacatagccgtctt gggacatccctccgtggctttcatgaacgggccacatcggcggagggagagggtcacctgcagacctttccttttgaatc ttggcgcgtctcctcttggcagagcgccccctcttacctgtcctatcctgcttttcttcagccgtctgaaaggcgtaacc ctggctaggtttatttattgaagccttctagtgggatactgtgtctgtgagaatgttgagtttccttttaaatcttaagt gcaatattttttattaccctattgccattatttctctcctggttttatccctgattcttggagtgtgtggcagaatgtca gtcagttctcggtcagtcttcttcctattctttggcctttgacatctgctccagcagcagatgtgtaaaaagcttacagc atcttgttgcaacagcagtgtactttgtagagacggaaaaacatctgtatgtttctgtgctgtgtcataaaagaatgtgt gagacaactgtgtgtctggatttgtattcaaatccaggtgactgttcatgtttgggtccagagagattaaatctcctcca acaaatcttttgaccaagtgcctggtttactactcaggcctgtctctgcagtttaaaatatttttgtcggtttgtttttt actacatcacgtctatttaggataaataaagagacaatacatgttaagctgtctttcctctttttcctgtttcttcgcag ctacattaacttgtgaggcagcttggttggtttatcaggcaacaaacgagcagctattcattaaacaaagattgtttaaa aacgaacacgcacacatgatctaaaatgagggatgtaatgcagaggttgggccagatgacctctaaggcctcttccatct ctatggcttcctccccctcctccccagggaaggagaaagccgccaggaggaccttcagtaaggcctccttttcaggccct ggggactgctgggaggggcagagcgggcacctggcacgtgcagcttcccccgcccggcccagtccgccaagggtgctcct tgaagggaagggtgtgctacagcaggctccggtgagcaccagcggagcccatgtcgggcagggggtgggacggggggctc tggtgatggtggtgggattcgtggccgcgtgggcttgtccggggctacccacggaagccgtccaagggccctcctcccaa atactcgaattccaggcactgccctttcacgttgccctcccctcccaggaaccaggcatcggttaggaagcccctccgga ggtcttccctcagaacgtgggtctcttggtgggggaggcaagaagtccttcttagtatcatctggactgcctcaagctgt ataaaataaagttgggctacaagtcatccccatcacggtggccattcacgattcaggaaaagtaaagaaatagaaggtca tggaattagttggagaatttcacacatagagttaaaaattaatataacaaaattgcaaactaggtttacagctccaaagg atatcacgtagggaagccagagacgttgttgagtcaaagatgaatgccgcttctttcttacatttcattgtcttttgagt ctacaaatgggagatggaaattacttcacagagggcctttcgaagcattaacaagtttgccccagctaaatagaattcgt cgctgggtgatgctgtgcattgtagaagacttctgtgaccaggagagggcagtgttcctgctgtgtcgctcagcagagtt taggctttaaaaaaacacacacacaggtgcagacccaaaagaagctgacttttagccatgcaagcaataaacgaactggc acagaaagggcct |
|
Protein
| Protein ID | habu1_s6078_g16683.t1 |
|---|---|
| Definition | - |
>habu1_s6078_g16683.t1 MSRFHGLCRGCLERRYQQITIPRGKNGFGFTICCDSPVRVQAVDSGGPADKAGLQQLDTVLRLNQQPVEAWKCVELAHEI RNCPQEIILLVWRIVPQVKPSLPGVTRHPSCKSTYDLQSPPTWREKSSTGRSRPPEQRQSCHVLYDGNHEFALNGWERYT ELGKAPQQHTMPPPSRPPSSSGTDKNYIILTPLNPGGQLLRRVCQENKAAGGNVCKGESCGKKSRLMKTVQTIKSHGSSP RSCPLMGSHIPPSSYGTYVTLAPKVLVFPIFVQPLDLCSPARTLLLSEELLLHETRNKPTEVTLFVYSDLLLFTREEEPG QCNVFRNPLYLKDVWLQEDSSEDLKFCILYLAEELECVLSLQARSHEQKTRVCWCLMDNIVKQQPRTTPTAPPAESKMLE PGAEKLGAVPSVGQDDSRRLAYPGRDSSIEGVTEEAVADVQGIGMEQGKRTCHLERKEQEALGSGSAAFAIPKLQVEGAF SQDLTCLTSLKLSGPGELAEEEEEDSSEAQLARGDRKRRSLFEPSVCQPACSLSVQNSLRRRTHSEGSLLQEPRAGHCFT SDTSLNYTEMQGSTPGWTLPSPQSLKKHLTKNGGSIHQLTLLFVGNRKQQQVLDPEGVCDSGAAHKMNKAMAKDVKNRLG LFRKRHEALGGQPENKADKGMKPLRPPPEEALKWGDSLEKLLQHKYGVAAFRSFLHTEFSEENLEFWLACEEYRNIKSQA KMIATARKIFTEYIAVQSCKEVNLDSYTREHTKESLQNISRGCFDLAQRRIYGLMEKDSYPRFLRSELYLDLINPRKPSS SL |
|