Gene
| Gene Model ID | habu1_s6083_g16721 |
|---|---|
| Locus | habu1_scaffold6083 : 97040 ... 132055 : - |
| To GenomeBrowser | habu1_scaffold6083:97040..132055 |
| Genes list of scaffold | habu1_scaffold6083 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cd83 antigen | GO:0001817 GO:0051240 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6083_g16721.t1 | 1 | 1 | V-set | 26 | 120 | 9.3e-06 | 25.5 | 4.4e-09 | 1.6e-05 | 24.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6083_g16721.t1 | gi|637290558|ref|XP_008107019.1| | PREDICTED: CD83 antigen [Anolis carolinensis] | 0.0 |
| habu1_s6083_g16721.t1 | gi|530643877|ref|XP_005308619.1| | PREDICTED: CD83 antigen [Chrysemys picta bellii] | 1.0e-35 |
| habu1_s6083_g16721.t1 | gi|558156708|ref|XP_006121902.1| | PREDICTED: CD83 antigen [Pelodiscus sinensis] | 1.0e-35 |
| habu1_s6083_g16721.t1 | gi|543743505|ref|XP_005512589.1| | PREDICTED: CD83 antigen [Columba livia] | 1.0e-34 |
| habu1_s6083_g16721.t1 | gi|719738268|ref|XP_010226539.1| | PREDICTED: CD83 antigen [Tinamus guttatus] | 2.0e-34 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.2 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.5 |
| Nose | 0.4 |
| Brain-1 | 0.1 |
| Eye | 0.2 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.1 |
| Spleen | 5.3 |
| Lung | 0.6 |
| Liver | 0.9 |
| Kidney | 0.1 |
| Pancreas | 0.2 |
| Small intestine | 0.2 |
| Large intestine | 0.7 |
| Stomach | 0.0 |
| heart | 0.2 |
| ovary | 0.1 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s6083_g16721.t1 |
|---|---|
| Definition | - |
>habu1_s6083_g16721.t1 gtggccaccatggcgctgctgagctgcctgggtgatctgtggcgggctgtggaggtggtgggtggcccagcgggcaggca gggaggggcagggatgggggtggggggaggttttggggcactcggtctctaaaagaaccaagatctccccttctgttgag cattcatggcgtcaatgtgttgctatcagcttgtcttcctaactcaaatctggtgtgggcttcatgcaatagctgatgcc ccacaagaagttgaggcaacatgtaatgaagatgcttttctcccttgtaaggtttcccaggatctacagctcacaaccgg aacagtcacctggtataagattgatgaaaagaacaaaggactgaaggatgtggaatataataaagaacattcacattcaa gaggatttaacgactccttagagatttctaatggcacctggcattttctgaagattaaacatgctacacacttcaatagt ggaacttataaatgtatcttacaggcaccagtcagagaatacaaccaaagtacaattatactcagagtaataggctgtcc agaggaattgcaaaacctgaaactcaaaaaatacacaacagaacttgtcctgctgagctctattgggagcttctatttgt tacttatcatccttacttgtaccaggggtgtcaaactgccggcccacgggccggacgcatcatccggaagctgcgcccac attcccggcaatggcaaaactgtcccgatacgttgtgcgacgtcgtgagtttgacatgtctgccctagaccatgtttctc aaccttgattactttaagatgtgtggactgagatttttttcttccgataagtgttgtagagtaaaattattgttactatg ctgagaaaaatcacatattttttaaaaaaattgttttgaaaataatatttgcaggacacattttttcctccgtgtggacc agttgtgtattaacagagaaacacacagagctgtaaagaaagctgccattggaataataaatgattatacttctatacaa agt |
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Protein
| Protein ID | habu1_s6083_g16721.t1 |
|---|---|
| Definition | - |
>habu1_s6083_g16721.t1 MASMCCYQLVFLTQIWCGLHAIADAPQEVEATCNEDAFLPCKVSQDLQLTTGTVTWYKIDEKNKGLKDVEYNKEHSHSRG FNDSLEISNGTWHFLKIKHATHFNSGTYKCILQAPVREYNQSTIILRVIGCPEELQNLKLKKYTTELVLLSSIGSFYLLL IILTCTRGVKLPAHGPDASSGSCAHIPGNGKTVPIRCATS |
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