Gene
| Gene Model ID | habu1_s6083_g16723 |
|---|---|
| Locus | habu1_scaffold6083 : 151146 ... 174490 : + |
| To GenomeBrowser | habu1_scaffold6083:151146..174490 |
| Genes list of scaffold | habu1_scaffold6083 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| e3 ubiquitin-protein ligase rnf182 | EC:6.3.2.19 GO:0004842 GO:0005737 GO:0008270 GO:0016567 GO:0016874 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6083_g16723.t1 | gi|602650838|ref|XP_007431811.1| | PREDICTED: E3 ubiquitin-protein ligase RNF182-like [Python bivittatus] | 0.0 |
| habu1_s6083_g16723.t1 | gi|637290553|ref|XP_008107018.1| | PREDICTED: E3 ubiquitin-protein ligase RNF182 [Anolis carolinensis] | 0.0 |
| habu1_s6083_g16723.t1 | gi|675614831|ref|XP_008936278.1| | PREDICTED: E3 ubiquitin-protein ligase RNF182 [Merops nubicus] | 0.0 |
| habu1_s6083_g16723.t1 | gi|704264487|ref|XP_010152073.1| | PREDICTED: E3 ubiquitin-protein ligase RNF182 [Eurypyga helias] | 0.0 |
| habu1_s6083_g16723.t1 | gi|697522678|ref|XP_009687047.1| | PREDICTED: E3 ubiquitin-protein ligase RNF182 [Struthio camelus australis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.1 |
| Nose | 1.1 |
| Brain-1 | 0.6 |
| Eye | 1.1 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.9 |
| Spleen | 0.2 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 2.5 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s6083_g16723.t1 |
|---|---|
| Definition | - |
>habu1_s6083_g16723.t1 atgacctccaaggtcccttccaactttactattattattattattattattaaaatgtttataaattacttggatgagat attagaaaattgtgtcagaatgatacattctgttctacacttgttatcatgcatgaggctgctgctttaaaaagcatgga catcaagccaagcttagattggaattttctttatgctattcctgcaataacaaggaaaaaaaatttcatcttatatttaa aatacaaaaggcattgaagaataaagcagataaatatgaatgagcactattactgcttccttttacctgggtggatataa gtgatgtgataatcatatcgtttcagatattattttttaaaaagaagataacggcttggctgacatccttctccagaagc ctaaagcatattaaaaaagaaatgacaagtctattggcagaagataatgtggagtctcagggctcagacgagcttgaatg caaaatctgttacaaccgctataacttgagacagagaaaacctaaagtcctggagtgttgccacagagtatgtgccaaat gcctttgcaagatcatagactttggggaatctcctcagggagtcatcgtttgtcctttctgtaggtttgaaacatgcctg cctgatgacgaggtgagtagtcttccagacgataacaacatccttgtcaatttggcttatggaggaaaggtaaagaagtg cctaccggacaatcctacagaacttttgttgactcccaaaaggaaaacagaattgatttcacaactgatttcataaatga tctgatactatccagaggttgcagattccttagaacccacctggcaaagaaaaattgatataattggaggaacggtgcct taatttcttcacctatattgcagttttgtggcaactgaaagaaatcccttttgcaggcatgatgagtcctcaccaatata atgccaccatcagcatttgtacgccattcaatattgttttaaaaggagtctcttatccaattccagttgaaagtcatcta agctctttttcagcaacaaacctgtaggtgtccattcagctttcctgaacagctatggggacagcacaagagatgcagaa tgtaagaaagcaagacaaactccgctgtgtagagaagtctactcaaatgatgttaaatgtagcccaatacaaactacagg tcttgagaaatgtatgtttctttctactcattcccctgttcaaacaggcaaagtccactgaccaaaaaataaatgcaaaa aaagtaggatatgaaaaaatgttttcagatgccagatcaatcacgtttattcctcactgaatatgaggccatctccacct agtggttaaatgcttctattgtttcaccaataaacaataaagtgggtttagcagctaattgtg |
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Protein
| Protein ID | habu1_s6083_g16723.t1 |
|---|---|
| Definition | - |
>habu1_s6083_g16723.t1 MTSLLAEDNVESQGSDELECKICYNRYNLRQRKPKVLECCHRVCAKCLCKIIDFGESPQGVIVCPFCRFETCLPDDEVSS LPDDNNILVNLAYGGKVKKCLPDNPTELLLTPKRKTELISQLIS |
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