Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s6083_g16725
Locus habu1_scaffold6083 : 196736 ... 207953 : +
To GenomeBrowser habu1_scaffold6083:196736..207953
Genes list of scaffold habu1_scaffold6083

Annotation by Blast2GO
Annotation GO
mitochondrial calcium uniporter regulator 1 GO:0006851 GO:0031305 GO:0051561 GO:0070509

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s6083_g16725.t1 1 1 DUF1640 136 329 0.0 228.5 0.0 0.0 227.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s6083_g16725.t1 gi|602650836|ref|XP_007431810.1| PREDICTED: mitochondrial calcium uniporter regulator 1 [Python bivittatus] 0.0
habu1_s6083_g16725.t1 gi|327270114|ref|XP_003219836.1| PREDICTED: mitochondrial calcium uniporter regulator 1 [Anolis carolinensis] 0.0
habu1_s6083_g16725.t1 gi|701414767|ref|XP_009999299.1| PREDICTED: mitochondrial calcium uniporter regulator 1 [Chaetura pelagica] 0.0
habu1_s6083_g16725.t1 gi|524987523|ref|XP_005041692.1| PREDICTED: mitochondrial calcium uniporter regulator 1, partial [Ficedula albicollis] 0.0
habu1_s6083_g16725.t1 gi|700332331|ref|XP_009913048.1| PREDICTED: mitochondrial calcium uniporter regulator 1, partial [Haliaeetus albicilla] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 2.6
Venom grand-1 2.1
Pit, infrared sensing 3.7
Nose 6.5
Brain-1 2.2
Eye 3.4
fetal fibroblast 7.7
venom gland-2 4.5
Brain-2 2.4
Spleen 2.4
Lung 2.1
Liver 2.0
Kidney 3.7
Pancreas 3.3
Small intestine 2.7
Large intestine 3.1
Stomach 1.9
heart 2.5
ovary 22.0
cheek muscle 1.6

Transcript
Transcript IDhabu1_s6083_g16725.t1
Definition-
>habu1_s6083_g16725.t1
cgaagaaacaaagcaacgacccccgtcgcgtcgtgaaaagcaaaagcagggatggtcagaagtctggccgctgccgccat
cgtggtgaacgggcaaaaaggcttgttcctcgttcagggagaacccgccgtcctgcttcgcgtaggcgcttcgcgtttcg
gcgtcacgcgctccccttttcctggccgttgcctaggagatcagaagcgggtgagcggcctcgcgaggagggcttttgga
gcgcgcgcgcgggcggcgggagtcagcccggtcggacagccgcgctctgaggcgcgcgcctcttccttgtcgcgtgccga
agtcgtcccttcgcctgcggtggggatccgcttcctcagcctgaacgggagtcgctgccgagcggtggaaggacgagctc
tgcagtttgaaaacagcaaaagcagatgttcaccattgggaagtagaacactttattttgatacccatgcctttgtgtgc
ctcttggaagaaaatggattcaccactcagcaatctgagatcattgtgtctgctttaatgaacattatgaagagcaatat
ggatatgatacacaaagacatggtcaccaaaatgcaacaggaaattgctgttcagcagataatgtctcatattggtgttg
taaaaaaggatatgattattttggaaaagagtgaattttcagcactccgagcagaaaatgagaaaataaaacttgaactt
cagcaactaaaaaagcaagtaatggatgaaacttccaaagtacgaacagatagcaagctagattttaatctagaaaaaag
cagagtaaaagaattgtattcgcttaacgatagaaaagtgttgaaaatgagaacagaaatagtggaattgcatgcccagc
aagatcgagctttaacacagacttataggaaaatagatactgaagttgcaggtctgaaaacaatgcttgaatcacacaaa
cttgacaacatcaaatatttagctggttcagtatttacgtgccttacagtagcactcggattttaccgtttatggatata
atgaaacattattttcaaggattgtattagcttgccaactagaaattcttgaattatgtcatggtttacttcctttgtat
tgataaacaggattctaaagatttcttgttgatgtatttaatggatgtttccattgtcatctattgttaataaatctctg
tccaactaaaaatgtt

Protein
Protein IDhabu1_s6083_g16725.t1
Definition-
>habu1_s6083_g16725.t1
MVRSLAAAAIVVNGQKGLFLVQGEPAVLLRVGASRFGVTRSPFPGRCLGDQKRVSGLARRAFGARARAAGVSPVGQPRSE
ARASSLSRAEVVPSPAVGIRFLSLNGSRCRAVEGRALQFENSKSRCSPLGSRTLYFDTHAFVCLLEENGFTTQQSEIIVS
ALMNIMKSNMDMIHKDMVTKMQQEIAVQQIMSHIGVVKKDMIILEKSEFSALRAENEKIKLELQQLKKQVMDETSKVRTD
SKLDFNLEKSRVKELYSLNDRKVLKMRTEIVELHAQQDRALTQTYRKIDTEVAGLKTMLESHKLDNIKYLAGSVFTCLTV
ALGFYRLWI

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