Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s6083_g16728
Locus habu1_scaffold6083 : 275143 ... 287915 : -
To GenomeBrowser habu1_scaffold6083:275143..287915
Genes list of scaffold habu1_scaffold6083

Annotation by Blast2GO
Annotation GO
nad-dependent protein deacylase sirtuin- mitochondrial isoform x2 GO:0005634 GO:0005829 GO:0006476 GO:0008270 GO:0031974 GO:0034979 GO:0036047 GO:0036049 GO:0036054 GO:0036055 GO:0044429 GO:0070403

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s6083_g16728.t1 gi|602677217|ref|XP_007444060.1| PREDICTED: LOW QUALITY PROTEIN: NAD-dependent protein deacylase sirtuin-5, mitochondrial [Python bivittatus] 8.0e-17
habu1_s6083_g16728.t1 gi|558156535|ref|XP_006121872.1| PREDICTED: NAD-dependent protein deacylase sirtuin-5, mitochondrial isoform X1 [Pelodiscus sinensis] 2.0e-16
habu1_s6083_g16728.t1 gi|620978061|ref|XP_007668771.1| PREDICTED: NAD-dependent protein deacylase sirtuin-5, mitochondrial [Ornithorhynchus anatinus] 5.0e-16
habu1_s6083_g16728.t1 gi|634826446|ref|XP_007950043.1| PREDICTED: NAD-dependent protein deacylase sirtuin-5, mitochondrial isoform X2 [Orycteropus afer afer] 5.0e-16
habu1_s6083_g16728.t1 gi|514763523|ref|XP_005023756.1| PREDICTED: NAD-dependent protein deacylase sirtuin-5, mitochondrial [Anas platyrhynchos] 5.0e-16

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 11.5
Venom grand-1 26.3
Pit, infrared sensing 14.2
Nose 11.0
Brain-1 9.9
Eye 10.9
fetal fibroblast 8.8
venom gland-2 19.7
Brain-2 8.9
Spleen 13.7
Lung 13.3
Liver 8.7
Kidney 36.6
Pancreas 32.3
Small intestine 7.7
Large intestine 13.7
Stomach 15.7
heart 25.7
ovary 75.0
cheek muscle 44.8

Transcript
Transcript IDhabu1_s6083_g16728.t1
Definition-
>habu1_s6083_g16728.t1
ggtcgcgctggctggacgggcccggggaagcgtgcggtggggctcgggatggccacttttccactttattcttttcaatc
tcacttagcagtatactggatcctaatgaagcttttcaaccttaccattggaacttcttctgtagtatatcctgctgcta
tgtttgctcctcaggtatctgccaggggagtgccagttgcagaattcaacatgcagagcactccagcaacggataaattc
agtaatggtgcaaatgtaaaaggaacctgttctcctttggaaaacgccttgcctgaaactgaacaatggaatccgaagat
gacgttgaacaaaataaatcatgattctcagatgacaagaacgagcagtggagaaggatgatggacagtgacaggaaaag
tggttatcgctttttttggggggggggggaaatcatgtgaattgaaagtataaatatacaaactgctcaaacgtatgaaa
aagatatttgtactctatagagttttcagattgtatcttggataaatgtcaagcaaaacaaggatgttaccattattcat
atttcacaaaattatcttctgaaaacgggggtaaaattctgaaaattttaagaataagctagcttttaatagagcctaca
ctccagtactttgcaggaaatcaataaacaaaagtattctttgctatgagatgatgctctctaatgggttcaagattgta
agcaatataaaaatagtagattaataacttcaatttgcatatggttgcctactttaatttcacttccagagttgaatgaa
tatatgtatgaacctaaatacagcttttaattctttgctgtcctgaggcactaaaataaatcgatgcctttttaattgat
ta

Protein
Protein IDhabu1_s6083_g16728.t1
Definition-
>habu1_s6083_g16728.t1
MATFPLYSFQSHLAVYWILMKLFNLTIGTSSVVYPAAMFAPQVSARGVPVAEFNMQSTPATDKFSNGANVKGTCSPLENA
LPETEQWNPKMTLNKINHDSQMTRTSSGEG

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