Gene
| Gene Model ID | habu1_s6115_g16779 |
|---|---|
| Locus | habu1_scaffold6115 : 304347 ... 315245 : - |
| To GenomeBrowser | habu1_scaffold6115:304347..315245 |
| Genes list of scaffold | habu1_scaffold6115 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| proteasome subunit alpha type-6 | EC:3.4.25.0 GO:0000932 GO:0003723 GO:0004298 GO:0005667 GO:0005844 GO:0006511 GO:0016363 GO:0019773 GO:0051059 GO:0051092 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6115_g16779.t1 | 1 | 1 | Proteasome_A_N | 9 | 31 | 1.5e-14 | 52.9 | 5.0e-18 | 2.5e-14 | 52.2 |
| habu1_s6115_g16779.t1 | 1 | 1 | Proteasome | 34 | 220 | 0.0 | 180.5 | 0.0 | 0.0 | 180.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6115_g16779.t1 | gi|602662239|ref|XP_007436765.1| | PREDICTED: proteasome subunit alpha type-6 [Python bivittatus] | 0.0 |
| habu1_s6115_g16779.t1 | gi|507530179|ref|XP_004649175.1| | PREDICTED: proteasome subunit alpha type-6 isoform X1 [Jaculus jaculus] | 0.0 |
| habu1_s6115_g16779.t1 | gi|507628960|ref|XP_004698589.1| | PREDICTED: proteasome subunit alpha type-6 [Echinops telfairi] | 0.0 |
| habu1_s6115_g16779.t1 | gi|126283549|ref|XP_001363110.1| | PREDICTED: proteasome subunit alpha type-6 [Monodelphis domestica] | 0.0 |
| habu1_s6115_g16779.t1 | gi|8394076|ref|NP_058979.1| | proteasome subunit alpha type-6 [Rattus norvegicus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 43.9 |
| Venom grand-1 | 75.5 |
| Pit, infrared sensing | 50.3 |
| Nose | 49.5 |
| Brain-1 | 21.4 |
| Eye | 36.2 |
| fetal fibroblast | 126.5 |
| venom gland-2 | 132.9 |
| Brain-2 | 26.9 |
| Spleen | 33.7 |
| Lung | 31.3 |
| Liver | 34.6 |
| Kidney | 41.4 |
| Pancreas | 45.8 |
| Small intestine | 36.6 |
| Large intestine | 38.7 |
| Stomach | 42.9 |
| heart | 61.5 |
| ovary | 204.0 |
| cheek muscle | 169.5 |
Transcript
| Transcript ID | habu1_s6115_g16779.t1 |
|---|---|
| Definition | - |
>habu1_s6115_g16779.t1 cgcttactaccaccacccccccagccgctggaaatagtaatcttttgcatgctttgtctgcgggcggtttccccgctgtt gctgcttcgtttacttttttccgcgcgaccatgtctcgagggtccagcgccgggtttgaccggcatatcactatcttttc ccctgaagggcgcctatatcaagtagaatatgcattcaaggccataaaccagggtggactgacatcagtagctgttcgtg gaaaggactgcgcagttgttgtcacacagaaaaaagtacctgacaagctactggattcgagcacagtgactcacttattc agaataactgaaaatataggatgtgtaatgaccggaatgacagcggacagtagatcccaggtgcaacgagcccgctatga ggctgctaactggaagtacaaatatggttatgagattccagtggatatgctatgtaaaagaattgcagatatttctcagg tctatacacagaatgctgaaatgagacctcttggttgctgcgtgattatgattggcattgatgaagaaaacaaccctcag gtgtacaagtgtgatccagccggatattactgtgggtttaaggccacagctgcaggagtcaaacaaacagaatcaactag ctttcttgaaaagaaagtgaagaaaaaattggactggacatttgaacagacagtggagaccgcagttacctgtctttcta ctgttttgtccattgacttcaaaccatccgaaatagaagtaggggttgttacagttgataatccaaaattcaggattctt acagaagcagaaattgatacgcaccttgtcgctctagcagagagagattaactctgtttaaaattgctcattctgtgatt gcaaggcagaatgtctggtgaattcaaatgggtggttctgaattatgggatgaaaacagaatgctctgtatctgatgtac ttcttcaccttgaataaataaagtgaggttttggaatggtttgt |
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Protein
| Protein ID | habu1_s6115_g16779.t1 |
|---|---|
| Definition | - |
>habu1_s6115_g16779.t1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVVVTQKKVPDKLLDSSTVTHLFRITENIGCVM TGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCVIMIGIDEENNPQVYKCDPAGYY CGFKATAAGVKQTESTSFLEKKVKKKLDWTFEQTVETAVTCLSTVLSIDFKPSEIEVGVVTVDNPKFRILTEAEIDTHLV ALAERD |
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