Gene
| Gene Model ID | habu1_s6115_g16781 |
|---|---|
| Locus | habu1_scaffold6115 : 359066 ... 380716 : + |
| To GenomeBrowser | habu1_scaffold6115:359066..380716 |
| Genes list of scaffold | habu1_scaffold6115 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serine threonine-protein phosphatase 2a regulatory subunit b subunit gamma | GO:0000226 GO:0001782 GO:0002759 GO:0005813 GO:0005819 GO:0030865 GO:0032147 GO:0043029 GO:0045579 GO:0048536 GO:0051900 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6115_g16781.t2 | 2 | 1 | EF-hand_7 | 273 | 310 | 9.8e-11 | 41.6 | 5.8e-07 | 0.0014 | 18.6 |
| habu1_s6115_g16781.t2 | 2 | 2 | EF-hand_7 | 334 | 385 | 9.8e-11 | 41.6 | 4.7e-06 | 0.012 | 15.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6115_g16781.t2 | gi|697471919|ref|XP_009669225.1| | PREDICTED: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X1 [Struthio camelus australis] | 0.0 |
| habu1_s6115_g16781.t2 | gi|529448518|ref|XP_005243954.1| | PREDICTED: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma [Falco peregrinus] | 0.0 |
| habu1_s6115_g16781.t2 | gi|530583131|ref|XP_005285397.1| | PREDICTED: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X2 [Chrysemys picta bellii] | 0.0 |
| habu1_s6115_g16781.t2 | gi|530583133|ref|XP_005285398.1| | PREDICTED: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X3 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.5 |
| Venom grand-1 | 2.9 |
| Pit, infrared sensing | 4.3 |
| Nose | 6.2 |
| Brain-1 | 7.8 |
| Eye | 6.6 |
| fetal fibroblast | 11.7 |
| venom gland-2 | 4.4 |
| Brain-2 | 9.4 |
| Spleen | 3.0 |
| Lung | 3.1 |
| Liver | 1.7 |
| Kidney | 2.1 |
| Pancreas | 0.8 |
| Small intestine | 1.6 |
| Large intestine | 3.0 |
| Stomach | 1.6 |
| heart | 4.3 |
| ovary | 29.6 |
| cheek muscle | 7.2 |
Transcript
| Transcript ID | habu1_s6115_g16781.t1 |
|---|---|
| Definition | - |
>habu1_s6115_g16781.t1 agcgggggaggcgtcgtacttgattgaagcgggaacgtcacggaagatggactggaagcaggcactgaaaagccggctgg ccgtcagtggcgaccctaaaaagagtgaccaagaattgaaggatgaagagatggagttgtttacaaaatactacctggaa tggaaaggaggtagaaaaagtgccagtacctcttatgtgaacataccacgattttattacaggctgccagcagaagatga aatattgttacaaaaattaagagaagaatctagagcagtctttttgcagagaaaaagtagagaattgctagataatgaag aattgcagaatttgtggtttctcttggatgaacatcagacaccacctatgatgggggatgaagcaatgattaactatgaa aacttcttgaaagttggtgaaaaagctggatccaagtgcaagcaattcttcacagctaaaatttttgctaaattacttca taatgatccctatggaagaatatctatcatgcagtttttcaattatgtaatgagaaaagtatggctgtaccagacaagaa taggcctcagtttatatgatgtagctggacaaggttacctcagagaatcagatttagaaaattatatattggaactcatt cccacattaccacagttggatggtttagaaaaatccttttactcattttatgtttgcactgctgtcagaaaattcttctt ctttttagatcctctcagaactgggaagataaaaatacaggatattttagcctgcagcttcctagatgacttactagagt tacgtgatgaagaactttctaaggaaagtcaagaaacaaattggttttctgctccttctgctttgagggtttacggccaa tatttaaatcttgacaaagatcacaatggcatgcttagcaaagaagaattgtctcgatatggaacaggaacactaaccaa catctttttggatcgggtcttccaggagtgtctgacctacgatggagaaatggactataagacgtacttggactttgtac ttgcattagaaaacagaaaggaacctgcagctttgcagtatattttcaaattgcttgatatagagaacaaaggatacctg aatgtcttttcccttaattatttttttagggctattcaagaacaaatgaaaatccatgggcaagatccagtttcttttca agatgtgaaggatgaaatctttgatatggtaaaacctaaggatccttacaagatttcacttcaagatttaatcaatagta gtcaaggagacacagttaccagtattctaattgatcttaatggcttctggacttacgaaaacagagaagttcttgtggcc agcgataatgacaatacaacagatcttcttgatacatgatttaacagaaatagattgtactattggagatatgcccaact gatacagtgactgttgaggctgaacagcaaattcattgcacatttcattgaagtttccgtttaactccagatggacatct ttttttttttttaagtgaaatgaacctcacttgagtttttaaaaaatgcttactaagacctgttattaaatgttaaaaag agctgttggtaa |
|
| Transcript ID | habu1_s6115_g16781.t2 |
| Definition | - |
>habu1_s6115_g16781.t2 ggcaatggggaaaaagtcacgatatgtcaggtgatgttgtgagtttgacacccctgatttagatggtcaggagcatatcc ttggaaagagatgtgagatgtaacgggacagtaatatttttaatttgctgcctgagggccccacaggatgaactttggtt gcttattggaaaagattagcgcacatgatgtctacgcaggcgatggctaaaaagagtgaccaagaattgaaggatgaaga gatggagttgtttacaaaatactacctggaatggaaaggaggtagaaaaagtgccagtacctcttatgtgaacataccac gattttattacaggctgccagcagaagatgaaatattgttacaaaaattaagagaagaatctagagcagtctttttgcag agaaaaagtagagaattgctagataatgaagaattgcagaatttgtggtttctcttggatgaacatcagacaccacctat gatgggggatgaagcaatgattaactatgaaaacttcttgaaagttggtgaaaaagctggatccaagtgcaagcaattct tcacagctaaaatttttgctaaattacttcataatgatccctatggaagaatatctatcatgcagtttttcaattatgta atgagaaaagtatggctgtaccagacaagaataggcctcagtttatatgatgtagctggacaaggttacctcagagaatc agatttagaaaattatatattggaactcattcccacattaccacagttggatggtttagaaaaatccttttactcatttt atgtttgcactgctgtcagaaaattcttcttctttttagatcctctcagaactgggaagataaaaatacaggatatttta gcctgcagcttcctagatgacttactagagttacgtgatgaagaactttctaaggaaagtcaagaaacaaattggttttc tgctccttctgctttgagggtttacggccaatatttaaatcttgacaaagatcacaatggcatgcttagcaaagaagaat tgtctcgatatggaacaggaacactaaccaacatctttttggatcgggtcttccaggagtgtctgacctacgatggagaa atggactataagacgtacttggactttgtacttgcattagaaaacagaaaggaacctgcagctttgcagtatattttcaa attgcttgatatagagaacaaaggatacctgaatgtcttttcccttaattatttttttagggctattcaagaacaaatga aaatccatgggcaagatccagtttcttttcaagatgtgaaggatgaaatctttgatatggtaaaacctaaggatccttac aagatttcacttcaagatttaatcaatagtagtcaaggagacacagttaccagtattctaattgatcttaatggcttctg gacttacgaaaacagagaagttcttgtggccagcgataatgacaatacaacagatcttcttgatacatgatttaacagaa atagattgtactattggagatatgcccaactgatacagtgactgttgaggctgaacagcaaattcattgcacatttcatt gaagtttccgtttaactccagatggacatctttttttttttttaagtgaaatgaacctcacttgagtttttaaaaaatgc ttactaagacctgttattaaatgttaaaaagagctgttggtaa |
|
Protein
| Protein ID | habu1_s6115_g16781.t1 |
|---|---|
| Definition | - |
>habu1_s6115_g16781.t1 MDWKQALKSRLAVSGDPKKSDQELKDEEMELFTKYYLEWKGGRKSASTSYVNIPRFYYRLPAEDEILLQKLREESRAVFL QRKSRELLDNEELQNLWFLLDEHQTPPMMGDEAMINYENFLKVGEKAGSKCKQFFTAKIFAKLLHNDPYGRISIMQFFNY VMRKVWLYQTRIGLSLYDVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKIKIQDI LACSFLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTGTLTNIFLDRVFQECLTYDG EMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLNVFSLNYFFRAIQEQMKIHGQDPVSFQDVKDEIFDMVKPKDP YKISLQDLINSSQGDTVTSILIDLNGFWTYENREVLVASDNDNTTDLLDT |
|
| Protein ID | habu1_s6115_g16781.t2 |
| Definition | - |
>habu1_s6115_g16781.t2 MMSTQAMAKKSDQELKDEEMELFTKYYLEWKGGRKSASTSYVNIPRFYYRLPAEDEILLQKLREESRAVFLQRKSRELLD NEELQNLWFLLDEHQTPPMMGDEAMINYENFLKVGEKAGSKCKQFFTAKIFAKLLHNDPYGRISIMQFFNYVMRKVWLYQ TRIGLSLYDVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKIKIQDILACSFLDDL LELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTGTLTNIFLDRVFQECLTYDGEMDYKTYLD FVLALENRKEPAALQYIFKLLDIENKGYLNVFSLNYFFRAIQEQMKIHGQDPVSFQDVKDEIFDMVKPKDPYKISLQDLI NSSQGDTVTSILIDLNGFWTYENREVLVASDNDNTTDLLDT |
|