Gene
Gene Model ID | habu1_s6115_g16781 |
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Locus | habu1_scaffold6115 : 359066 ... 380716 : + |
To GenomeBrowser | habu1_scaffold6115:359066..380716 |
Genes list of scaffold | habu1_scaffold6115 |
Annotation by Blast2GO
Annotation | GO |
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serine threonine-protein phosphatase 2a regulatory subunit b subunit gamma | GO:0000226 GO:0001782 GO:0002759 GO:0005813 GO:0005819 GO:0030865 GO:0032147 GO:0043029 GO:0045579 GO:0048536 GO:0051900 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
habu1_s6115_g16781.t2 | 2 | 1 | EF-hand_7 | 273 | 310 | 9.8e-11 | 41.6 | 5.8e-07 | 0.0014 | 18.6 |
habu1_s6115_g16781.t2 | 2 | 2 | EF-hand_7 | 334 | 385 | 9.8e-11 | 41.6 | 4.7e-06 | 0.012 | 15.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
habu1_s6115_g16781.t2 | gi|697471919|ref|XP_009669225.1| | PREDICTED: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X1 [Struthio camelus australis] | 0.0 |
habu1_s6115_g16781.t2 | gi|529448518|ref|XP_005243954.1| | PREDICTED: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma [Falco peregrinus] | 0.0 |
habu1_s6115_g16781.t2 | gi|530583131|ref|XP_005285397.1| | PREDICTED: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X2 [Chrysemys picta bellii] | 0.0 |
habu1_s6115_g16781.t2 | gi|530583133|ref|XP_005285398.1| | PREDICTED: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X3 [Chrysemys picta bellii] | 0.0 |
Expression profile
Libraries | FPKM |
---|---|
>Adult | |
Venom fang forming tissue | 3.5 |
Venom grand-1 | 2.9 |
Pit, infrared sensing | 4.3 |
Nose | 6.2 |
Brain-1 | 7.8 |
Eye | 6.6 |
fetal fibroblast | 11.7 |
venom gland-2 | 4.4 |
Brain-2 | 9.4 |
Spleen | 3.0 |
Lung | 3.1 |
Liver | 1.7 |
Kidney | 2.1 |
Pancreas | 0.8 |
Small intestine | 1.6 |
Large intestine | 3.0 |
Stomach | 1.6 |
heart | 4.3 |
ovary | 29.6 |
cheek muscle | 7.2 |
Transcript
Transcript ID | habu1_s6115_g16781.t1 |
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Definition | - |
>habu1_s6115_g16781.t1 agcgggggaggcgtcgtacttgattgaagcgggaacgtcacggaagatggactggaagcaggcactgaaaagccggctgg ccgtcagtggcgaccctaaaaagagtgaccaagaattgaaggatgaagagatggagttgtttacaaaatactacctggaa tggaaaggaggtagaaaaagtgccagtacctcttatgtgaacataccacgattttattacaggctgccagcagaagatga aatattgttacaaaaattaagagaagaatctagagcagtctttttgcagagaaaaagtagagaattgctagataatgaag aattgcagaatttgtggtttctcttggatgaacatcagacaccacctatgatgggggatgaagcaatgattaactatgaa aacttcttgaaagttggtgaaaaagctggatccaagtgcaagcaattcttcacagctaaaatttttgctaaattacttca taatgatccctatggaagaatatctatcatgcagtttttcaattatgtaatgagaaaagtatggctgtaccagacaagaa taggcctcagtttatatgatgtagctggacaaggttacctcagagaatcagatttagaaaattatatattggaactcatt cccacattaccacagttggatggtttagaaaaatccttttactcattttatgtttgcactgctgtcagaaaattcttctt ctttttagatcctctcagaactgggaagataaaaatacaggatattttagcctgcagcttcctagatgacttactagagt tacgtgatgaagaactttctaaggaaagtcaagaaacaaattggttttctgctccttctgctttgagggtttacggccaa tatttaaatcttgacaaagatcacaatggcatgcttagcaaagaagaattgtctcgatatggaacaggaacactaaccaa catctttttggatcgggtcttccaggagtgtctgacctacgatggagaaatggactataagacgtacttggactttgtac ttgcattagaaaacagaaaggaacctgcagctttgcagtatattttcaaattgcttgatatagagaacaaaggatacctg aatgtcttttcccttaattatttttttagggctattcaagaacaaatgaaaatccatgggcaagatccagtttcttttca agatgtgaaggatgaaatctttgatatggtaaaacctaaggatccttacaagatttcacttcaagatttaatcaatagta gtcaaggagacacagttaccagtattctaattgatcttaatggcttctggacttacgaaaacagagaagttcttgtggcc agcgataatgacaatacaacagatcttcttgatacatgatttaacagaaatagattgtactattggagatatgcccaact gatacagtgactgttgaggctgaacagcaaattcattgcacatttcattgaagtttccgtttaactccagatggacatct ttttttttttttaagtgaaatgaacctcacttgagtttttaaaaaatgcttactaagacctgttattaaatgttaaaaag agctgttggtaa |
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Transcript ID | habu1_s6115_g16781.t2 |
Definition | - |
>habu1_s6115_g16781.t2 ggcaatggggaaaaagtcacgatatgtcaggtgatgttgtgagtttgacacccctgatttagatggtcaggagcatatcc ttggaaagagatgtgagatgtaacgggacagtaatatttttaatttgctgcctgagggccccacaggatgaactttggtt gcttattggaaaagattagcgcacatgatgtctacgcaggcgatggctaaaaagagtgaccaagaattgaaggatgaaga gatggagttgtttacaaaatactacctggaatggaaaggaggtagaaaaagtgccagtacctcttatgtgaacataccac gattttattacaggctgccagcagaagatgaaatattgttacaaaaattaagagaagaatctagagcagtctttttgcag agaaaaagtagagaattgctagataatgaagaattgcagaatttgtggtttctcttggatgaacatcagacaccacctat gatgggggatgaagcaatgattaactatgaaaacttcttgaaagttggtgaaaaagctggatccaagtgcaagcaattct tcacagctaaaatttttgctaaattacttcataatgatccctatggaagaatatctatcatgcagtttttcaattatgta atgagaaaagtatggctgtaccagacaagaataggcctcagtttatatgatgtagctggacaaggttacctcagagaatc agatttagaaaattatatattggaactcattcccacattaccacagttggatggtttagaaaaatccttttactcatttt atgtttgcactgctgtcagaaaattcttcttctttttagatcctctcagaactgggaagataaaaatacaggatatttta gcctgcagcttcctagatgacttactagagttacgtgatgaagaactttctaaggaaagtcaagaaacaaattggttttc tgctccttctgctttgagggtttacggccaatatttaaatcttgacaaagatcacaatggcatgcttagcaaagaagaat tgtctcgatatggaacaggaacactaaccaacatctttttggatcgggtcttccaggagtgtctgacctacgatggagaa atggactataagacgtacttggactttgtacttgcattagaaaacagaaaggaacctgcagctttgcagtatattttcaa attgcttgatatagagaacaaaggatacctgaatgtcttttcccttaattatttttttagggctattcaagaacaaatga aaatccatgggcaagatccagtttcttttcaagatgtgaaggatgaaatctttgatatggtaaaacctaaggatccttac aagatttcacttcaagatttaatcaatagtagtcaaggagacacagttaccagtattctaattgatcttaatggcttctg gacttacgaaaacagagaagttcttgtggccagcgataatgacaatacaacagatcttcttgatacatgatttaacagaa atagattgtactattggagatatgcccaactgatacagtgactgttgaggctgaacagcaaattcattgcacatttcatt gaagtttccgtttaactccagatggacatctttttttttttttaagtgaaatgaacctcacttgagtttttaaaaaatgc ttactaagacctgttattaaatgttaaaaagagctgttggtaa |
Protein
Protein ID | habu1_s6115_g16781.t1 |
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Definition | - |
>habu1_s6115_g16781.t1 MDWKQALKSRLAVSGDPKKSDQELKDEEMELFTKYYLEWKGGRKSASTSYVNIPRFYYRLPAEDEILLQKLREESRAVFL QRKSRELLDNEELQNLWFLLDEHQTPPMMGDEAMINYENFLKVGEKAGSKCKQFFTAKIFAKLLHNDPYGRISIMQFFNY VMRKVWLYQTRIGLSLYDVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKIKIQDI LACSFLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTGTLTNIFLDRVFQECLTYDG EMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLNVFSLNYFFRAIQEQMKIHGQDPVSFQDVKDEIFDMVKPKDP YKISLQDLINSSQGDTVTSILIDLNGFWTYENREVLVASDNDNTTDLLDT |
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Protein ID | habu1_s6115_g16781.t2 |
Definition | - |
>habu1_s6115_g16781.t2 MMSTQAMAKKSDQELKDEEMELFTKYYLEWKGGRKSASTSYVNIPRFYYRLPAEDEILLQKLREESRAVFLQRKSRELLD NEELQNLWFLLDEHQTPPMMGDEAMINYENFLKVGEKAGSKCKQFFTAKIFAKLLHNDPYGRISIMQFFNYVMRKVWLYQ TRIGLSLYDVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKIKIQDILACSFLDDL LELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTGTLTNIFLDRVFQECLTYDGEMDYKTYLD FVLALENRKEPAALQYIFKLLDIENKGYLNVFSLNYFFRAIQEQMKIHGQDPVSFQDVKDEIFDMVKPKDPYKISLQDLI NSSQGDTVTSILIDLNGFWTYENREVLVASDNDNTTDLLDT |