Gene
| Gene Model ID | habu1_s6115_g16782 |
|---|---|
| Locus | habu1_scaffold6115 : 382938 ... 395715 : - |
| To GenomeBrowser | habu1_scaffold6115:382938..395715 |
| Genes list of scaffold | habu1_scaffold6115 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6115_g16782.t1 | 1 | 1 | FAM177 | 13 | 129 | 0.0 | 162.2 | 0.0 | 0.0 | 162.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6115_g16782.t1 | gi|602662425|ref|XP_007436856.1| | PREDICTED: protein FAM177A1 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s6115_g16782.t1 | gi|602662427|ref|XP_007436857.1| | PREDICTED: protein FAM177A1 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s6115_g16782.t1 | gi|558137283|ref|XP_006117743.1| | PREDICTED: protein FAM177A1 [Pelodiscus sinensis] | 0.0 |
| habu1_s6115_g16782.t1 | gi|530583137|ref|XP_005285400.1| | PREDICTED: protein FAM177A1 isoform X2 [Chrysemys picta bellii] | 0.0 |
| habu1_s6115_g16782.t1 | gi|591381635|ref|XP_007065353.1| | PREDICTED: protein FAM177A1 [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 12.0 |
| Venom grand-1 | 12.9 |
| Pit, infrared sensing | 12.3 |
| Nose | 17.9 |
| Brain-1 | 14.0 |
| Eye | 9.2 |
| fetal fibroblast | 16.5 |
| venom gland-2 | 12.6 |
| Brain-2 | 17.2 |
| Spleen | 6.3 |
| Lung | 12.4 |
| Liver | 9.3 |
| Kidney | 21.4 |
| Pancreas | 3.3 |
| Small intestine | 6.6 |
| Large intestine | 14.8 |
| Stomach | 10.6 |
| heart | 15.9 |
| ovary | 26.8 |
| cheek muscle | 16.6 |
Transcript
| Transcript ID | habu1_s6115_g16782.t1 |
|---|---|
| Definition | - |
>habu1_s6115_g16782.t1 aacgcggggagactatggagcaggggctgtctgctctttccttatactgcgctccagtcgctgccgccgccgctgcctac gccatggatcaggaacagctaaatacaaatggagacagaggttttgagaatgtggaacttggtgtcatgggaaaaaagaa gaaaattccaagaagagttattcattttgcaagtggtgaaaccatggaagaatatagtacagatgaagatgacgagcagc aagagaaaaaagacctattgccttctgttgatccagcatcattaacgtggggtccttatttgtggtttcagatgctaaga gtagccacatcaacactctcagtgtgtgacttccttggtgaaaaaattgcctctgttttgggcatcagtacaccaaaata ccaatatgccatagatgaatactacagaatgaaaaaggaggaggaggaagaagaggaagaggacaaattgtcagaggaag cagaaaggagatttcaagaacaacagaagcagagccaagaagggatggctgttcaaactgcccagccaagggatacagcg tgtagtacatttatgaatctcaattttgaaagtgaagaagagcatcagtccgttgtagaaagtaaacgggattttactgt agtgtctgcttagaatgacatacaataccatttcttgaattgccaaacatctgttggtcctttttggcatgtttagtggc atgtaatttatttcaaaatatggccatgagagagttattaatattagtttcttcagtccatctctgtctaataaaggcca aaatatcttatttcacctgttatgaaatggaaataaatgggttctattttgatctttct |
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Protein
| Protein ID | habu1_s6115_g16782.t1 |
|---|---|
| Definition | - |
>habu1_s6115_g16782.t1 MDQEQLNTNGDRGFENVELGVMGKKKKIPRRVIHFASGETMEEYSTDEDDEQQEKKDLLPSVDPASLTWGPYLWFQMLRV ATSTLSVCDFLGEKIASVLGISTPKYQYAIDEYYRMKKEEEEEEEEDKLSEEAERRFQEQQKQSQEGMAVQTAQPRDTAC STFMNLNFESEEEHQSVVESKRDFTVVSA |
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