Gene
| Gene Model ID | habu1_s6115_g16783 |
|---|---|
| Locus | habu1_scaffold6115 : 398328 ... 414155 : - |
| To GenomeBrowser | habu1_scaffold6115:398328..414155 |
| Genes list of scaffold | habu1_scaffold6115 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| signal recognition particle 54 kda protein isoform x1 | GO:0003924 GO:0005525 GO:0005730 GO:0005786 GO:0006614 GO:0008144 GO:0008152 GO:0008312 GO:0019003 GO:0030942 GO:0042493 GO:0043021 GO:0044822 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6115_g16783.t3 | 1 | 1 | SRP54_N | 6 | 83 | 2.1e-17 | 62.9 | 9.6e-20 | 5.5e-17 | 61.6 |
| habu1_s6115_g16783.t3 | 1 | 1 | SRP54 | 119 | 313 | 0.0 | 260.9 | 0.0 | 0.0 | 258.9 |
| habu1_s6115_g16783.t3 | 1 | 1 | AAA_33 | 120 | 237 | 1.5e-06 | 28.1 | 5.2e-09 | 3.0e-06 | 27.1 |
| habu1_s6115_g16783.t3 | 1 | 1 | cobW | 121 | 269 | 1.5e-07 | 31.0 | 1.1e-09 | 6.4e-07 | 28.9 |
| habu1_s6115_g16783.t3 | 1 | 1 | CbiA | 128 | 269 | 1.0e-05 | 25.0 | 7.4e-08 | 4.2e-05 | 23.0 |
| habu1_s6115_g16783.t3 | 1 | 1 | DUF2209 | 205 | 269 | 8.1e-06 | 25.9 | 4.8e-08 | 2.7e-05 | 24.2 |
| habu1_s6115_g16783.t3 | 1 | 1 | SRP_SPB | 343 | 448 | 1.2e-26 | 92.9 | 2.2e-29 | 1.2e-26 | 92.9 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 22.8 |
| Venom grand-1 | 34.5 |
| Pit, infrared sensing | 23.5 |
| Nose | 33.2 |
| Brain-1 | 15.8 |
| Eye | 23.1 |
| fetal fibroblast | 57.9 |
| venom gland-2 | 119.0 |
| Brain-2 | 14.9 |
| Spleen | 17.2 |
| Lung | 20.6 |
| Liver | 22.7 |
| Kidney | 17.2 |
| Pancreas | 30.0 |
| Small intestine | 17.0 |
| Large intestine | 21.8 |
| Stomach | 25.3 |
| heart | 32.6 |
| ovary | 92.0 |
| cheek muscle | 67.5 |
Transcript
| Transcript ID | habu1_s6115_g16783.t1 |
|---|---|
| Definition | - |
>habu1_s6115_g16783.t1 gtaaggtttgtgtggaaggctggtagcttttcggttacctgagtccgcaaatgtgagacttctccagactgtttcaggtt accctgacatgcccctttgcatacgtacaaatttgagaactttgggcggaggggaagcacacgtgctattttgtgaagtt aaaaatgtagatcctgcttttgcagtgatgccacaagttgcactgactcaaccggaggaagacgcttcttcgggggtaat tgaaatccttggtgcccatcaagtaacctggacacttttcttacatccagatatatagtcatatttgaactgaatctatt gtcaagatggttttagcagatcttgggagaaaaattacctcagcattgcgctccctgagcaatgctaccattatcaatga agaggttttaaatgctatgctaaaagaagtttgtacagcattattggaagctgatgtcaacattaaactagtgaaacaac taagagaaaatgtcaaatctgctattgaccttgaagaaatggcttctggactcaacaaaagaaaaatgatccaacatgcc gtctttaaagaacttgttaagcttgtagatcctggagtcaaagcttggacacccacaaaaggaaaacaaaatatcatcat gtttgtaggcttgcaaggaagtggcaaaacaacttcatgctcaaagttggcatattattaccagaagaaaggctggaaga catgtttgatatgtgcagacacttacagagcaggtgcttttgatcaattaaaacagaatgcaacaaaagcaagaattcca ttttatgggagttacacagagatggatcctgtaattattgcttcagaaggtgttgaaaaatttaagaatgaaaactttga aataataatagttgatacaagcggtcgtcacaagcaggaagactctttgtttgaagaaatgctgcaagttgctaatgcca tacaaccagataatatagtttatgtgatggatgcctctatcggtcaagcctgtgaagctcaagcaaaggcgttcaaagat aaagttgatgttgcttctgtaattgtgacaaaacttgatggccatgccaagggaggtggagcattgagtgcagttgctgc aactaaaagtccaatcatttttattggaactggagaacatatagatgactttgaaccttttaaaacacaaccttttatca gtaaacttcttggcatgggagatattgaaggattgatagataaagtaaatgaattgaaattagatgataatgaggctctc atagagaaattaaaacacggtcaattcacattgagggatatgtatgaacagttccaaaacatcatgaaaatggggccctt cagtcaaatactgggtatgatcccaggttttggaacagatttcatgagtaaaggcaatgaacaggaatcaatggcacggc taaaaaaactgatgacgataatggacagtatgaatgatcaagaactagatagtaccgatggagccaaagttttcagtaag caaccaggaagaatccagagagtagcaagaggttctggtgtttcaactagagatgttcaggaactcctgacacagtacac aaaatttgcacaaatggtgaaaaagatgggaggcattaaaggactttttaaaggaggtgatatgtcaaagaatgtaaatc catcccagatggcaaaactgaatcaacagatggcaaagatgatggatcccagagttcttcatcatatgggtggcatggca ggattgcagtcaatgatgcgccaatttcaacagggagctgctggaaatataaaaggcatgatgggattcaataacatgta aaaaacagccttaataaactgacttgattgaccattattt |
|
| Transcript ID | habu1_s6115_g16783.t2 |
| Definition | - |
>habu1_s6115_g16783.t2 tttactggctttctgaggaccccctaagaggcccgggctgttgtgtgggtttcagagcggggccagatcaggccgccgct tcgcttctcggtcatatttgaactgaatctattgtcaagatggttttagcagatcttgggagaaaaattacctcagcatt gcgctccctgagcaatgctaccattatcaatgaagaggttttaaatgctatgctaaaagaagtttgtacagcattattgg aagctgatgtcaacattaaactagtgaaacaactaagagaaaatgtcaaatctgctattgaccttgaagaaatggcttct ggactcaacaaaagaaaaatgatccaacatgccgtctttaaagaacttgttaagcttgtagatcctggagtcaaagcttg gacacccacaaaaggaaaacaaaatatcatcatgtttgtaggcttgcaaggaagtggcaaaacaacttcatgctcaaagt tggcatattattaccagaagaaaggctggaagacatgtttgatatgtgcagacacttacagagcaggtgcttttgatcaa ttaaaacagaatgcaacaaaagcaagaattccattttatgggagttacacagagatggatcctgtaattattgcttcaga aggtgttgaaaaatttaagaatgaaaactttgaaataataatagttgatacaagcggtcgtcacaagcaggaagactctt tgtttgaagaaatgctgcaagttgctaatgccatacaaccagataatatagtttatgtgatggatgcctctatcggtcaa gcctgtgaagctcaagcaaaggcgttcaaagataaagttgatgttgcttctgtaattgtgacaaaacttgatggccatgc caagggaggtggagcattgagtgcagttgctgcaactaaaagtccaatcatttttattggaactggagaacatatagatg actttgaaccttttaaaacacaaccttttatcagtaaacttcttggcatgggagatattgaaggattgatagataaagta aatgaattgaaattagatgataatgaggctctcatagagaaattaaaacacggtcaattcacattgagggatatgtatga acagttccaaaacatcatgaaaatggggcccttcagtcaaatactgggtatgatcccaggttttggaacagatttcatga gtaaaggcaatgaacaggaatcaatggcacggctaaaaaaactgatgacgataatggacagtatgaatgatcaagaacta gatagtaccgatggagccaaagttttcagtaagcaaccaggaagaatccagagagtagcaagaggttctggtgtttcaac tagagatgttcaggaactcctgacacagtacacaaaatttgcacaaatggtgaaaaagatgggaggcattaaaggacttt ttaaaggaggtgatatgtcaaagaatgtaaatccatcccagatggcaaaactgaatcaacagatggcaaagatgatggat cccagagttcttcatcatatgggtggcatggcaggattgcagtcaatgatgcgccaatttcaacagggagctgctggaaa tataaaaggcatgatgggattcaataacatgtaaaaaacagccttaataaactgacttgattgaccattattt |
|
| Transcript ID | habu1_s6115_g16783.t3 |
| Definition | - |
>habu1_s6115_g16783.t3 tttactggctttctgaggaccccctaagaggcccgggctgttgtgtgggtttcagagcggggccagatcaggccgccgct tcgcttctcggtcatatttgaactgaatctattgtcaagatggttttagcagatcttgggagaaaaattacctcagcatt gcgctccctgagcaatgctaccattatcaatgaagaggttttaaatgctatgctaaaagaagtttgtacagcattattgg aagctgatgtcaacattaaactagtgaaacaactaagagaaaatgtcaaatctgctattgaccttgaagaaatggcttct ggactcaacaaaagaaaaatgatccaacatgccgtctttaaagaacttgttaagcattgcagcagttcaggcagtcctcg tcatacgatcattcatttggcgactcttgtagatcctggagtcaaagcttggacacccacaaaaggaaaacaaaatatca tcatgtttgtaggcttgcaaggaagtggcaaaacaacttcatgctcaaagttggcatattattaccagaagaaaggctgg aagacatgtttgatatgtgcagacacttacagagcaggtgcttttgatcaattaaaacagaatgcaacaaaagcaagaat tccattttatgggagttacacagagatggatcctgtaattattgcttcagaaggtgttgaaaaatttaagaatgaaaact ttgaaataataatagttgatacaagcggtcgtcacaagcaggaagactctttgtttgaagaaatgctgcaagttgctaat gccatacaaccagataatatagtttatgtgatggatgcctctatcggtcaagcctgtgaagctcaagcaaaggcgttcaa agataaagttgatgttgcttctgtaattgtgacaaaacttgatggccatgccaagggaggtggagcattgagtgcagttg ctgcaactaaaagtccaatcatttttattggaactggagaacatatagatgactttgaaccttttaaaacacaacctttt atcagtaaacttcttggcatgggagatattgaaggattgatagataaagtaaatgaattgaaattagatgataatgaggc tctcatagagaaattaaaacacggtcaattcacattgagggatatgtatgaacagttccaaaacatcatgaaaatggggc ccttcagtcaaatactgggtatgatcccaggttttggaacagatttcatgagtaaaggcaatgaacaggaatcaatggca cggctaaaaaaactgatgacgataatggacagtatgaatgatcaagaactagatagtaccgatggagccaaagttttcag taagcaaccaggaagaatccagagagtagcaagaggttctggtgtttcaactagagatgttcaggaactcctgacacagt acacaaaatttgcacaaatggtgaaaaagatgggaggcattaaaggactttttaaaggaggtgatatgtcaaagaatgta aatccatcccagatggcaaaactgaatcaacagatggcaaagatgatggatcccagagttcttcatcatatgggtggcat ggcaggattgcagtcaatgatgcgccaatttcaacagggagctgctggaaatataaaaggcatgatgggattcaataaca tgtaaaaaacagccttaataaactgacttgattgaccattattt |
|
Protein
| Protein ID | habu1_s6115_g16783.t1 |
|---|---|
| Definition | - |
>habu1_s6115_g16783.t1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVF KELVKLVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTSCSKLAYYYQKKGWKTCLICADTYRAGAFDQLKQNATKARIPFY GSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNELKLDDNEALIE KLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQP GRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL QSMMRQFQQGAAGNIKGMMGFNNM |
|
| Protein ID | habu1_s6115_g16783.t2 |
| Definition | - |
>habu1_s6115_g16783.t2 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVF KELVKLVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTSCSKLAYYYQKKGWKTCLICADTYRAGAFDQLKQNATKARIPFY GSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNELKLDDNEALIE KLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQP GRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL QSMMRQFQQGAAGNIKGMMGFNNM |
|
| Protein ID | habu1_s6115_g16783.t3 |
| Definition | - |
>habu1_s6115_g16783.t3 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVF KELVKHCSSSGSPRHTIIHLATLVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTSCSKLAYYYQKKGWKTCLICADTYRAG AFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDA SIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGL IDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMN DQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMA KMMDPRVLHHMGGMAGLQSMMRQFQQGAAGNIKGMMGFNNM |
|