Gene
| Gene Model ID | habu1_s6115_g16786 |
|---|---|
| Locus | habu1_scaffold6115 : 500525 ... 540736 : + |
| To GenomeBrowser | habu1_scaffold6115:500525..540736 |
| Genes list of scaffold | habu1_scaffold6115 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sorting nexin- partial | GO:0006886 GO:0030512 GO:0031901 GO:0034713 GO:0035091 GO:0042147 GO:0042803 GO:0045892 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6115_g16786.t2 | 1 | 1 | Cofilin_ADF | 23 | 134 | 2.4e-31 | 108.2 | 3.2e-34 | 7.9e-31 | 106.5 |
| habu1_s6115_g16786.t2 | 1 | 1 | PX | 230 | 368 | 1.3e-19 | 70.0 | 4.3e-22 | 1.1e-18 | 67.1 |
| habu1_s6115_g16786.t2 | 2 | 1 | Vps5 | 386 | 542 | 2.3e-15 | 56.5 | 2.3e-14 | 5.6e-11 | 42.1 |
| habu1_s6115_g16786.t2 | 1 | 1 | BAR | 410 | 600 | 2.2e-09 | 37.2 | 5.3e-10 | 1.3e-06 | 28.1 |
| habu1_s6115_g16786.t2 | 2 | 2 | Vps5 | 527 | 590 | 2.3e-15 | 56.5 | 5.6e-10 | 1.4e-06 | 27.7 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 32.1 |
| Venom grand-1 | 25.7 |
| Pit, infrared sensing | 28.4 |
| Nose | 24.3 |
| Brain-1 | 19.8 |
| Eye | 24.7 |
| fetal fibroblast | 106.1 |
| venom gland-2 | 31.9 |
| Brain-2 | 22.7 |
| Spleen | 31.7 |
| Lung | 30.5 |
| Liver | 42.4 |
| Kidney | 48.9 |
| Pancreas | 26.3 |
| Small intestine | 23.5 |
| Large intestine | 30.1 |
| Stomach | 32.1 |
| heart | 62.0 |
| ovary | 123.2 |
| cheek muscle | 107.5 |
Transcript
| Transcript ID | habu1_s6115_g16786.t1 |
|---|---|
| Definition | - |
>habu1_s6115_g16786.t1 cgccgccatcaccccccgcgccgccacccagcccgggcaccatggcttctggggtaacagtgaatgatgaagttatcaag gttttcaatgatatgaaagtacggaaatcttcaacatcggaagagattaaaaaaagaaagaaagcagttcttttctgttt aagtgctgacaaaaagcaaataattgtagaagaagcaaagcagatattagttggtgacattggtgtcacagttgaggacc cttatatagcctttgtgaagctgttacctctgaatgattgccgatatgctttgtatgatgcaacatatgaaacaaaggaa tctaaaaaggaagatctggtatttatattctgggccccagaaaatgcccctttaaaaagcaagatgatctatgcaagttc taaagatgccattaaaaagaaatttacaggtattaagcatgaatggcaggaaggctcggacgacggcccagatttcctct ccgaagaggaccgaggacttagagctgttactgtagatctgcaaactgatgctgctttgcaagtggacatttcagatgct cttagtgaaagggacaaagtcaaattcactgttcatacaaagagttctttaccaaattttaaacaaaatgaattttcagt tgtcagacaacatgaagagtttatctggcttcatgattcctttgttgagaatgaagattatgcaggctacattataccac cagcgccaccgaggcctgactttgatgcttcaagagaaaaattgcagaagcttggtgaaggagaaggatccatgactaag gaagaatttactaagatgaagcaagaattagaagcggaatacttggcaatcttcaaaaagacagtagctatgcatgaagt cttcttatgccgtgtagctgctcatcccattttgaggaaggatttaaatttccatgtcttcttggaatataatcaggatt tgagtgttcgggggaaaaataagaaagagaaacttgaagacttttttaaaaacatggttaaatctgctgatggtgtcatt gtttcaggagtaaaggatgtagatgatttttttgaacatgaaagaacattccttgtagaataccataaccgtgtcaagga ttcctctctcaagtctgataaaatgacaagatcccacaaaaatgttgcagatgactacaatagaattggttcttcattat atacattgggaacacaggactccacagatatatgcaaatttttcctgaaagtatctgaattgtttgataaaacaaggaaa atagaggcccgcgtatctgccgatgaggatcttaaactctcagatcttctaaaatactacctaagagaatcacaagctgc aaaggaccttctgtataggagatcaaggtcattagtggattatgaaaatgctaacaaggcactggacaaagcaagagcaa aaaacaaagatgtactgcaagctgaaaatactcagcagctttgctgtcataaatttgaaaaaatatctgaatcagcaaaa caagaacttatagattttaaaactagaagagttgctgcattcaggaagaatctagtagaactggcagaattggaactgaa acatgctaagggcaatttacagctgttgcagagctgtctggcagtgcttaatggtgatacataaaccagaatctgtcatc ctgttaataagggctgccttccactggaatttacgactttgtattaatatttacaacttggtggatttgttgataaagga tacataaaacacgttccttttttcccccaaaaaataaaatcataaatgtatcagaataat |
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| Transcript ID | habu1_s6115_g16786.t2 |
| Definition | - |
>habu1_s6115_g16786.t2 cgccgccatcaccccccgcgccgccacccagcccgggcaccatggcttctggggtaacagtgaatgatgaagttatcaag gttttcaatgatatgaaagtacggaaatcttcaacatcggaagagattaaaaaaagaaagaaagcagttcttttctgttt aagtgctgacaaaaagcaaataattgtagaagaagcaaagcagatattagttggtgacattggtgtcacagttgaggacc cttatatagcctttgtgaagctgttacctctgaatgattgccgatatgctttgtatgatgcaacatatgaaacaaaggaa tctaaaaaggaagatctggtatttatattctgggccccagaaaatgcccctttaaaaagcaagatgatctatgcaagttc taaagatgccattaaaaagaaatttacagggttatatcaaacatcttgctggcagaagaaagtttatcctttcccatcca gactttgtgatgcagccctacggattccagagtcttttccaactatcagaagagacttggaggaaaggaacctctcagag gcgcagtgtggcttttggccagaatggaacactgcacacatgatatttgtcatgagacaaaacaccgtgggagggattgt acaagaaggctcggacgacggcccagatttcctctccgaagaggaccgaggacttagagctgttactgtagatctgcaaa ctgatgctgctttgcaagtggacatttcagatgctcttagtgaaagggacaaagtcaaattcactgttcatacaaagagt tctttaccaaattttaaacaaaatgaattttcagttgtcagacaacatgaagagtttatctggcttcatgattcctttgt tgagaatgaagattatgcaggctacattataccaccagcgccaccgaggcctgactttgatgcttcaagagaaaaattgc agaagcttggtgaaggagaaggatccatgactaaggaagaatttactaagatgaagcaagaattagaagcggaatacttg gcaatcttcaaaaagacagtagctatgcatgaagtcttcttatgccgtgtagctgctcatcccattttgaggaaggattt aaatttccatgtcttcttggaatataatcaggatttgagtgttcgggggaaaaataagaaagagaaacttgaagactttt ttaaaaacatggttaaatctgctgatggtgtcattgtttcaggagtaaaggatgtagatgatttttttgaacatgaaaga acattccttgtagaataccataaccgtgtcaaggattcctctctcaagtctgataaaatgacaagatcccacaaaaatgt tgcagatgactacaatagaattggttcttcattatatacattgggaacacaggactccacagatatatgcaaatttttcc tgaaagtatctgaattgtttgataaaacaaggaaaatagaggcccgcgtatctgccgatgaggatcttaaactctcagat cttctaaaatactacctaagagaatcacaagctgcaaaggaccttctgtataggagatcaaggtcattagtggattatga aaatgctaacaaggcactggacaaagcaagagcaaaaaacaaagatgtactgcaagctgaaaatactcagcagctttgct gtcataaatttgaaaaaatatctgaatcagcaaaacaagaacttatagattttaaaactagaagagttgctgcattcagg aagaatctagtagaactggcagaattggaactgaaacatgctaagggcaatttacagctgttgcagagctgtctggcagt gcttaatggtgatacataaaccagaatctgtcatcctgttaataagggctgccttccactggaatttacgactttgtatt aatatttacaacttggtggatttgttgataaaggatacataaaacacgttccttttttcccccaaaaaataaaatcataa atgtatcagaataat |
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Protein
| Protein ID | habu1_s6115_g16786.t1 |
|---|---|
| Definition | - |
>habu1_s6115_g16786.t1 MASGVTVNDEVIKVFNDMKVRKSSTSEEIKKRKKAVLFCLSADKKQIIVEEAKQILVGDIGVTVEDPYIAFVKLLPLNDC RYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASSKDAIKKKFTGIKHEWQEGSDDGPDFLSEEDRGLRAVTVDL QTDAALQVDISDALSERDKVKFTVHTKSSLPNFKQNEFSVVRQHEEFIWLHDSFVENEDYAGYIIPPAPPRPDFDASREK LQKLGEGEGSMTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRKDLNFHVFLEYNQDLSVRGKNKKEKLED FFKNMVKSADGVIVSGVKDVDDFFEHERTFLVEYHNRVKDSSLKSDKMTRSHKNVADDYNRIGSSLYTLGTQDSTDICKF FLKVSELFDKTRKIEARVSADEDLKLSDLLKYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAENTQQL CCHKFEKISESAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQSCLAVLNGDT |
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| Protein ID | habu1_s6115_g16786.t2 |
| Definition | - |
>habu1_s6115_g16786.t2 MASGVTVNDEVIKVFNDMKVRKSSTSEEIKKRKKAVLFCLSADKKQIIVEEAKQILVGDIGVTVEDPYIAFVKLLPLNDC RYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASSKDAIKKKFTGLYQTSCWQKKVYPFPSRLCDAALRIPESFP TIRRDLEERNLSEAQCGFWPEWNTAHMIFVMRQNTVGGIVQEGSDDGPDFLSEEDRGLRAVTVDLQTDAALQVDISDALS ERDKVKFTVHTKSSLPNFKQNEFSVVRQHEEFIWLHDSFVENEDYAGYIIPPAPPRPDFDASREKLQKLGEGEGSMTKEE FTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRKDLNFHVFLEYNQDLSVRGKNKKEKLEDFFKNMVKSADGVIVS GVKDVDDFFEHERTFLVEYHNRVKDSSLKSDKMTRSHKNVADDYNRIGSSLYTLGTQDSTDICKFFLKVSELFDKTRKIE ARVSADEDLKLSDLLKYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAENTQQLCCHKFEKISESAKQE LIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQSCLAVLNGDT |
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