Gene
| Gene Model ID | habu1_s6237_g16984 |
|---|---|
| Locus | habu1_scaffold6237 : 69076 ... 88466 : + |
| To GenomeBrowser | habu1_scaffold6237:69076..88466 |
| Genes list of scaffold | habu1_scaffold6237 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| methylthioribulose-1-phosphate dehydratase | EC:4.2.1.109 GO:0005737 GO:0008270 GO:0019284 GO:0019509 GO:0042802 GO:0043066 GO:0046570 GO:0070372 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6237_g16984.t1 | 1 | 1 | Aldolase_II | 29 | 222 | 4.90454e-44 | 150.1 | 0.0 | 5.88545e-44 | 149.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6237_g16984.t1 | gi|602639336|ref|XP_007426488.1| | PREDICTED: methylthioribulose-1-phosphate dehydratase [Python bivittatus] | 0.0 |
| habu1_s6237_g16984.t1 | gi|637336323|ref|XP_003225217.2| | PREDICTED: methylthioribulose-1-phosphate dehydratase isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s6237_g16984.t1 | gi|637336327|ref|XP_008115611.1| | PREDICTED: methylthioribulose-1-phosphate dehydratase isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s6237_g16984.t1 | gi|591387260|ref|XP_007068046.1| | PREDICTED: methylthioribulose-1-phosphate dehydratase [Chelonia mydas] | 0.0 |
| habu1_s6237_g16984.t1 | gi|530635460|ref|XP_005304596.1| | PREDICTED: methylthioribulose-1-phosphate dehydratase [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 19.7 |
| Venom grand-1 | 44.1 |
| Pit, infrared sensing | 19.8 |
| Nose | 20.4 |
| Brain-1 | 10.1 |
| Eye | 18.7 |
| fetal fibroblast | 29.8 |
| venom gland-2 | 73.4 |
| Brain-2 | 14.0 |
| Spleen | 23.5 |
| Lung | 20.4 |
| Liver | 49.8 |
| Kidney | 52.8 |
| Pancreas | 56.0 |
| Small intestine | 29.7 |
| Large intestine | 20.9 |
| Stomach | 32.4 |
| heart | 46.1 |
| ovary | 81.9 |
| cheek muscle | 67.0 |
Transcript
| Transcript ID | habu1_s6237_g16984.t1 |
|---|---|
| Definition | - |
>habu1_s6237_g16984.t1 ggtctttctccgaaaggaacagctgcggtcctaagaagattctagtggttgtagcgctatggcggagccctttggggact gcgcttctccgtacaagaacggcttcgaggaagcaaaggaaaatgtgcacccaaggaatttgattccagagctttgtcgg caattttatcatttaggatgggttacaggaactggtggtggaatcagcatgaaacatggcaatggaatatatattgctcc gtctggtgtccaaaaagaaagaatacagcctgaagacatgtttgtgtgtgatattgaagaaaaagacatcagtggccctc cgtcctacaagaaactcaagaagagccaatgtacacctctgttcatgaatgcttatatcatgagaggagctggagcagtg attcatactcattccaaagctgctgtaatggccacacttttgtatccaggaaaagagtttaaaatcactcatcaggagat gataaaaggaatcaagaaatgtactacagggggatatttcagatatgatgacatgttagtagtccctattgttgagaata cacctgaagagaaggacttgaaggagagaatggcacatgcaatgaacacatatccggacacttgtgctgtgctggtcagg cgtcatggtgtttatgtttggggtgaaacttgggaaaaagccaagacaatgtgtgaatgttacgactaccttttcgacat tgcagtacaaatgaaacaacatgaaattgatccttctgtaattcccaatggagaaaatggaattgtttagcaactttttc cctaaaaactacctttcagtacagtgttattggatttctaggacgcgtctgattattaaacactaaccattcaacattgt tt |
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Protein
| Protein ID | habu1_s6237_g16984.t1 |
|---|---|
| Definition | - |
>habu1_s6237_g16984.t1 MAEPFGDCASPYKNGFEEAKENVHPRNLIPELCRQFYHLGWVTGTGGGISMKHGNGIYIAPSGVQKERIQPEDMFVCDIE EKDISGPPSYKKLKKSQCTPLFMNAYIMRGAGAVIHTHSKAAVMATLLYPGKEFKITHQEMIKGIKKCTTGGYFRYDDML VVPIVENTPEEKDLKERMAHAMNTYPDTCAVLVRRHGVYVWGETWEKAKTMCECYDYLFDIAVQMKQHEIDPSVIPNGEN GIV |
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