Gene
| Gene Model ID | habu1_s6237_g16987 |
|---|---|
| Locus | habu1_scaffold6237 : 206536 ... 229333 : + |
| To GenomeBrowser | habu1_scaffold6237:206536..229333 |
| Genes list of scaffold | habu1_scaffold6237 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| reverse transcriptase-like | EC:2.7.7.49 GO:0003964 GO:0006278 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6237_g16987.t1 | 1 | 1 | RVT_1 | 110 | 327 | 2.5e-37 | 128.3 | 8.5e-41 | 4.2e-37 | 127.5 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 0.1 |
| Nose | 0.3 |
| Brain-1 | 0.1 |
| Eye | 0.1 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.2 |
| Brain-2 | 0.1 |
| Spleen | 0.3 |
| Lung | 0.1 |
| Liver | 1.0 |
| Kidney | 0.1 |
| Pancreas | 0.4 |
| Small intestine | 0.3 |
| Large intestine | 0.3 |
| Stomach | 0.1 |
| heart | 0.1 |
| ovary | 0.0 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s6237_g16987.t1 |
|---|---|
| Definition | - |
>habu1_s6237_g16987.t1 gaggactaaaccggtcgtaagtcgaggactacccaaccggtcgtaagtcgaggactttccctgcctgggagcgccgcgca tgcgtggttccgccccctgcgccggccgaggtgtagctggcaagcggcagagacgtagcaggccgaccaccagctggccc agcccaagggagcttgatgtcatccgcaaatttgatgagttccccatctatcccctcgtccaaatcattgatgaagatgt tgaaaagcactgggcccagaacaaagccctggggcatcccactacacacttccctccatgtagatgtggttccattgagg accacacgctgagtacggccggcagatatctttctaatattcaggagcatattgtaaagcagctaatggcttcatccaat tatttttcaaactatcgcaccattgcactcatttcacatgctagtaaagttatgcttaaaatcttacaagctagactcca gcagtatgtggatcgagaactaccagaagtacaggcaggatttcgaagaggcagaggaactagagatcaaattgccaaca tatgctggatcatggagaaagctagggagttccagaaaaacatctacttctgcttcattgactatgctaaagcctttgat tgtgtggatcacaacaaattgtggcaagttcttaaagaaatgggagtaccagaccatcttatttgtctcttgagaaacct atatgcaggtcaagaagcaacagtgagaactggacacggaaccactgattggttcaaaattgggaaaggggtccagcaag gctgtatactgttgccctgcctatttaacttacatgcagagcacatcataagaaaggcagggctagatgaatcaaaagtt ggaattaagattgccgggggaaatatcaacaacctaagatatgcagatgataccactctaatgacagaaagtgaagagga actaaagagcctcttgatgcaggtgaagaaggagagtgcaaaagttggcttgaaactcaacattaagaaaaccaaaatca tggcatccggccctctcaattcctggcaaatagatggggaagaaatggaggtagtaacagattttattttcctgggctcc aagatcacctcagatggggactgcagccaagaaattaaaagacgcttgctcctggggaggaaagttatggcaaatctaga cagcatactaaaaagcagagacatcaccctgccaacaaaagtgtgtatagtcaaggccatggttttcccagttgcaatgt atggatgtgaaagttggaccataagaaaggctgagcgacaaagaattgaggcctttgaactatggtgctggagaagactc ctgcgagtcccttggactgcaaggcgttcaaaccagtcagtcctagaagagatcaaccccaactgctctttagaaggcca gatcctgaagttgaaactcaagtactttggccatctaatgagaaggaagagcgtaatgttcggaaagattgagggcaata gaagaaggggacgacagagaatgaggtggctggatggagtcactgaagcagtaggtgtgagcttaaatggactccagaag atggtagaggacaggaagacctggaggaacgttatccatggggttgggatgggtcggacacgacttcgcaaccaacaaca acaaaaatagatgttttttaccaaaaaaatcatataacaacactgtttgaagatcttgctttttgatggctgtaaatatg actaatatggtgtactctgatttgtgttttggatgaatcagttcagggatcaggaggtattttggatatgtgattcagca gttagaaaggttcctgcagactctgaagaatctctgttttgcatgacagctaatcgtgctcttcatgaattaattcgttt agaggacaacaagcataaacctcagcttttgagtgctattgtaagtttttgatctgtaagcaagttggagatctcagtga gtaacaacatcaattcattttcatcagcaatctggtaagtgttaaccaggagtacaaaatcaacattatcttataaatag agttataatgttacttgtgttacactgttgaaaatctacatcagtttgacaataaaagtataatccatacaccatccc |
|
Protein
| Protein ID | habu1_s6237_g16987.t1 |
|---|---|
| Definition | - |
>habu1_s6237_g16987.t1 MRGSAPCAGRGVAGKRQRRSRPTTSWPSPRELDVIRKFDEFPIYPLVQIIDEDVEKHWAQNKALGHPTTHFPPCRCGSIE DHTLSTAGRYLSNIQEHIVKQLMASSNYFSNYRTIALISHASKVMLKILQARLQQYVDRELPEVQAGFRRGRGTRDQIAN ICWIMEKAREFQKNIYFCFIDYAKAFDCVDHNKLWQVLKEMGVPDHLICLLRNLYAGQEATVRTGHGTTDWFKIGKGVQQ GCILLPCLFNLHAEHIIRKAGLDESKVGIKIAGGNINNLRYADDTTLMTESEEELKSLLMQVKKESAKVGLKLNIKKTKI MASGPLNSWQIDGEEMEVVTDFIFLGSKITSDGDCSQEIKRRLLLGRKVMANLDSILKSRDITLPTKVCIVKAMVFPVAM YGCESWTIRKAERQRIEAFELWCWRRLLRVPWTARRSNQSVLEEINPNCSLEGQILKLKLKYFGHLMRRKSVMFGKIEGN RRRGRQRMRWLDGVTEAVGVSLNGLQKMVEDRKTWRNVIHGVGMGRTRLRNQQQQK |
|