Gene
| Gene Model ID | habu1_s6237_g16988 |
|---|---|
| Locus | habu1_scaffold6237 : 229936 ... 253746 : + |
| To GenomeBrowser | habu1_scaffold6237:229936..253746 |
| Genes list of scaffold | habu1_scaffold6237 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ets-related transcription factor elf-5 isoform x2 | GO:0003677 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6237_g16988.t4 | 1 | 1 | SAM_PNT | 38 | 118 | 1.4e-27 | 95.2 | 6.5e-31 | 2.4e-27 | 94.4 |
| habu1_s6237_g16988.t4 | 1 | 1 | Ets | 165 | 226 | 2.1e-19 | 69.4 | 1.2e-22 | 4.4e-19 | 68.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6237_g16988.t4 | gi|591387221|ref|XP_007068028.1| | PREDICTED: LOW QUALITY PROTEIN: ETS-related transcription factor Elf-5 [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.5 |
| Venom grand-1 | 13.8 |
| Pit, infrared sensing | 3.6 |
| Nose | 13.0 |
| Brain-1 | 0.1 |
| Eye | 3.4 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 28.4 |
| Brain-2 | 0.1 |
| Spleen | 0.6 |
| Lung | 0.3 |
| Liver | 0.0 |
| Kidney | 0.9 |
| Pancreas | 1.9 |
| Small intestine | 0.1 |
| Large intestine | 0.1 |
| Stomach | 1.1 |
| heart | 0.0 |
| ovary | 0.2 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s6237_g16988.t1 |
|---|---|
| Definition | - |
>habu1_s6237_g16988.t1 aaagtgttccatatatcggagaactgcaggtggcccttctcgcagtttacacctcactgagccggaaaacctcttggctt tgaagattactttcggatctaacctttccttgagaagaaaacaagtgctcccagctgcacgatgatgctggactccgtta gccataataccttcctgccaaacacagtaacgtgtgaatccttgacatcgtggtcagacgtatttggaatagtggatgaa cagtactcactttttgatcatcaaacagcttgtgattcatcctggacatcaatgcatccagaatactggacaagacacaa tgtctgtatctccttctttcaggacaatgaagatacaaagtcatctgaaaaagactataatgataaggcatgtttgagaa caggtggcctcaagagtcaagagtttcaaggtcacaatagaacaagtctgcagagttctcacttgtgggaatttgtacga gatcttcttctgtcccctgaagagaattccggtatccttgaatgggaagacagagaccaaggcatctttcgcgttatcaa atctgatgctctggcaaagatgtggggacaaaggaaaaaaaatgacagaatgacttatgaaaagctaagcagagcactcc ggtattattataaaactggaattttggaacgggttgacaggagattagtgtataagtttggaaaaaatgcacatggatgg caagaaagcaactcatgagatacccatatctttggactcattatccagtaaacaatgtgaaggtcaactccaat |
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| Transcript ID | habu1_s6237_g16988.t2 |
| Definition | - |
>habu1_s6237_g16988.t2 aaagtgttccatatatcggagaactgcaggtggcccttctcgcagtttacacctcactgagccggaaaacctcttggctt tgaagattactttcggatctaacctttccttgagaagaaaacaagtgctcccagctgcacgatgatgctggactccgtta gccataataccttcctgccaaacacagtaacgtgtgaatccttgacatcgtggtcagacgtatttggaatagtggatgaa cagtactcactttttgatcatcaaacagcttgtgattcatcctggacatcaatgcatccagaatactggacaagacacaa tgtctgtgagtggctacagttttgctgtgatcaatacaaattggatgctaactgcatttccttttcccacttcaacatta atggtcaccagctctgttgtatgacccaagaagaatttttaaatgctgctggaatttgtggtgaatacctctacttcatt ctccaaaacatcaagattcgtggtatctccttctttcaggacaatgaagatacaaagtcatctgaaaaagactataatga taaggcatgtttgagaacaggtggcctcaagagtcaagagtttcaaggtcacaatagaacaagtctgcagagttctcact tgtgggaatttgtacgagatcttcttctgtcccctgaagagaattccggtatccttgaatgggaagacagagaccaaggc atctttcgcgttatcaaatctgatgctctggcaaagatgtggggacaaaggaaaaaaaatgacagaatgacttatgaaaa gctaagcagagcactccggtattattataaaactggaattttggaacgggttgacaggagattagtgtataagtttggaa aaaatgcacatggatggcaagaaagcaactcatgagatacccatatctttggactcattatccagtaaacaatgtgaagg tcaactccaat |
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| Transcript ID | habu1_s6237_g16988.t3 |
| Definition | - |
>habu1_s6237_g16988.t3 aaagtgttccatatatcggagaactgcaggtggcccttctcgcagtttacacctcactgagccggaaaacctcttggctt tgaagattactttcggatctaacctttccttgagaagaaaacaagtgctcccagctgcacgatgatgctggactccgtta gccataataccttcctgccaaacacagtaacgtgtgaatccttgacatcgtggtcagacgtatttggaatagtggatgaa cagtactcactttttgatcatcaaacagcttgtgattcatcctggacatcaatgcatccagaatactggacaagacacaa tgtctgtgagtggctacagttttgctgtgatcaatacaaattggatgctaactgcatttccttttcccacttcaacatta atggtcaccagctctgttgtatgacccaagaagaatttttaaatgctgctggaatttgtggtgaatacctctacttcatt ctccaaaacatcaagattcgtggtatctccttctttcaggacaatgaagatacaaagtcatctgaaaaagactgtctgca gagttctcacttgtgggaatttgtacgagatcttcttctgtcccctgaagagaattccggtatccttgaatgggaagaca gagaccaaggcatctttcgcgttatcaaatctgatgctctggcaaagatgtggggacaaaggaaaaaaaatgacagaatg acttatgaaaagctaagcagagcactccggtattattataaaactggaattttggaacgggttgacaggagattagtgta taagtttggaaaaaatgcacatggatggcaagaaagcaactcatgagatacccatatctttggactcattatccagtaaa caatgtgaaggtcaactccaat |
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| Transcript ID | habu1_s6237_g16988.t4 |
| Definition | - |
>habu1_s6237_g16988.t4 aaagtgttccatatatcggagaactgcaggtggcccttctcgcagtttacacctcactgagccggaaaacctcttggctt tgaagattactttcggatctaacctttccttgagaagaaaacaagtgctcccagctgcacgatgatgctggactccgtta gccataataccttcctgccaaacacagtaacgtgtgaatccttgacatcgtggtcagacgtatttggaatagtggatgaa cagtactcactttttgatcatcaaacagcttgtgattcatcctggacatcaatgcatccagaatactggacaagacacaa tgtctgtgagtggctacagttttgctgtgatcaatacaaattggatgctaactgcatttccttttcccacttcaacatta atggtcaccagctctgttgtatgacccaagaagaatttttaaatgctgctggaatttgtggtgaatacctctacttcatt ctccaaaacatcaagattcgtggtatctccttctttcaggacaatgaagatacaaagtcatctgaaaaagactataatga taaggcatgtttgagaacaggtggcctcaagagtcaagagtttcaaggtcacaatagaacaagtctgcagagttctcact tgtgggaatttgtacgagatcttcttctgtcccctgaagagaattccggtatccttgaatgggaagacagagaccaaggc atctttcgcgttatcaaatctgatgctctggcaaagatgtggggacaaaggaaaaaaaatgacagaatgacttatgaaaa gctaagcagagcactccgcattgtgtctatccagataggcttgaatgcctgcaccataatcaggatgaacatcagtaaag tttttcacctaaattggcaaaggacattgaggtcatttgtctcttttgctaattcctgtactgatgaggacaagtcaatt gctattggcacagagatctgaaatttcaacacaccaggagtgtatttacttcaattactcatatggcaaatgtactattt ttcctctgaaaagctgaaaaatatttttacaagaaaaatactacttatctttccatttatatctaaccaagtggcatagg cataggcataggcataggcatatgggatgggatgggatgggatgggatgggatgggatgggatgggatgggatggaatag aatagaatagaatagaatagaatagaatagaatagaatagaatagaatagaatagaatttatttgaccagtgtgattcgg cacatggggaatttgtctctgctgcagacgttttcagtgtacatgcaaagcaacagaataataataatcataataataca ataagagaggttgtaaagaagataataagaataataatactgcagtcatactacatggattatatatatagacttgtaaa tagtaaacatatctacatctaattttaaaatgctttatcataaatggtttatttttctacccatggtgaaatatattcaa cactaaagttaatctggactggaagctgacaacttacatttttattaattttcaaattaaaatgttgaaaagactccaat aga |
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Protein
| Protein ID | habu1_s6237_g16988.t1 |
|---|---|
| Definition | - |
>habu1_s6237_g16988.t1 MLDSVSHNTFLPNTVTCESLTSWSDVFGIVDEQYSLFDHQTACDSSWTSMHPEYWTRHNVCISFFQDNEDTKSSEKDYND KACLRTGGLKSQEFQGHNRTSLQSSHLWEFVRDLLLSPEENSGILEWEDRDQGIFRVIKSDALAKMWGQRKKNDRMTYEK LSRALRYYYKTGILERVDRRLVYKFGKNAHGWQESNS |
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| Protein ID | habu1_s6237_g16988.t2 |
| Definition | - |
>habu1_s6237_g16988.t2 MLDSVSHNTFLPNTVTCESLTSWSDVFGIVDEQYSLFDHQTACDSSWTSMHPEYWTRHNVCEWLQFCCDQYKLDANCISF SHFNINGHQLCCMTQEEFLNAAGICGEYLYFILQNIKIRGISFFQDNEDTKSSEKDYNDKACLRTGGLKSQEFQGHNRTS LQSSHLWEFVRDLLLSPEENSGILEWEDRDQGIFRVIKSDALAKMWGQRKKNDRMTYEKLSRALRYYYKTGILERVDRRL VYKFGKNAHGWQESNS |
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| Protein ID | habu1_s6237_g16988.t3 |
| Definition | - |
>habu1_s6237_g16988.t3 MLDSVSHNTFLPNTVTCESLTSWSDVFGIVDEQYSLFDHQTACDSSWTSMHPEYWTRHNVCEWLQFCCDQYKLDANCISF SHFNINGHQLCCMTQEEFLNAAGICGEYLYFILQNIKIRGISFFQDNEDTKSSEKDCLQSSHLWEFVRDLLLSPEENSGI LEWEDRDQGIFRVIKSDALAKMWGQRKKNDRMTYEKLSRALRYYYKTGILERVDRRLVYKFGKNAHGWQESNS |
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| Protein ID | habu1_s6237_g16988.t4 |
| Definition | - |
>habu1_s6237_g16988.t4 MLDSVSHNTFLPNTVTCESLTSWSDVFGIVDEQYSLFDHQTACDSSWTSMHPEYWTRHNVCEWLQFCCDQYKLDANCISF SHFNINGHQLCCMTQEEFLNAAGICGEYLYFILQNIKIRGISFFQDNEDTKSSEKDYNDKACLRTGGLKSQEFQGHNRTS LQSSHLWEFVRDLLLSPEENSGILEWEDRDQGIFRVIKSDALAKMWGQRKKNDRMTYEKLSRALRIVSIQIGLNACTIIR MNISKVFHLNWQRTLRSFVSFANSCTDEDKSIAIGTEI |
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