Gene
| Gene Model ID | habu1_s6237_g16994 |
|---|---|
| Locus | habu1_scaffold6237 : 537559 ... 574769 : - |
| To GenomeBrowser | habu1_scaffold6237:537559..574769 |
| Genes list of scaffold | habu1_scaffold6237 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| caprin-1 isoform x7 | GO:0005737 GO:0016020 GO:0044822 GO:0061003 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6237_g16994.t2 | 2 | 1 | Caprin-1_C | 349 | 565 | 0.0 | 399.5 | 0.0 | 0.0 | 333.5 |
| habu1_s6237_g16994.t2 | 2 | 2 | Caprin-1_C | 563 | 615 | 0.0 | 399.5 | 1.6e-25 | 8.0e-22 | 78.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6237_g16994.t2 | gi|602644661|ref|XP_007428781.1| | PREDICTED: caprin-1 isoform X4 [Python bivittatus] | 0.0 |
| habu1_s6237_g16994.t2 | gi|637336267|ref|XP_008115600.1| | PREDICTED: caprin-1 isoform X6 [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 49.1 |
| Venom grand-1 | 115.5 |
| Pit, infrared sensing | 63.5 |
| Nose | 40.4 |
| Brain-1 | 23.1 |
| Eye | 39.7 |
| fetal fibroblast | 76.2 |
| venom gland-2 | 94.1 |
| Brain-2 | 24.7 |
| Spleen | 101.6 |
| Lung | 124.4 |
| Liver | 189.0 |
| Kidney | 257.1 |
| Pancreas | 224.4 |
| Small intestine | 353.2 |
| Large intestine | 108.0 |
| Stomach | 172.8 |
| heart | 62.5 |
| ovary | 99.8 |
| cheek muscle | 135.0 |
Transcript
| Transcript ID | habu1_s6237_g16994.t1 |
|---|---|
| Definition | - |
>habu1_s6237_g16994.t1 tagagttcaccgagtcttttcctggtgccttcccatcttccatttcttcacacactcgcacgcgggcgcgcgcatctctc acgtaagcgatgccctcggccaccagcagcgcgatggcgagcagcggcagtaaagcgggcaacgaggcaacggtagcggc ggcttcttctcaggcagcggtttcgggtggcactacgagttcggtgcagacagaggccatgaagcagattttgggtgtca tcgataagaagctgcgcaatttggagaagaaaaagagcaaacttgatgattatcaagatcgaatgaacagaggagaacgc cttaaccaagatcagctggatgctgtgtcaaagtaccaggaagtcagtaataatctggaatttgccaaggaactgcagag gagtttcatggctctaagtcaagatattcaaaaaacaataaagaagacagcccgacgggaacagctaatgagagaagaag ctgaacaaaaacatttaaagacagtacttgaattgcagtatattttggacaaattgggtgatgatgaagtgcgcagtgac ctaaaacaaggaacaaatggggtatctatattaacagaagcagaactatccacacttgacgagttttacaagctggttga acccgaacgtgatatgaacataagattgaatgaacaatatgaacaggcatccattcatttgtgggatctgttggaaggga aggaaaaacctgtatgcgggacaacatataaagccctaaaagaaattgttgaacgcattcttcaaacaagttattttgac agtgctcacaaccatcaaaatggactttgtgaagaagaagagacagcatctgcacccacagttgaagattctgtgacaga agctgagcctgaaccaacagaagaatacactgaaccaagtgaagttgaatcaacagagtatgtaaacagacagttcatgt cagaggctcagttcagcaataatgaaaaggaacaagtagacgaatggacagttgaaactgttgaggtggtaaattcactc cagcagcaaccacaggctacatctcccccacttccagatgcacatacacttacagctgtagctcaagcagatccacttat tagaagacaacgagtgcaggaccttatggcgcaaatgcaaggcccatataactttatgcaggactctatgctggaatttg agaaccaagcacttgaccctgctattgtttcagctcagcctatgaatccacaaactttgcagataccacagatggtttgc cctccagttcacgctgaatctagacttacacaaacaacccaggttcctgtacaacctgaagccacacaggtccccttggt ttcttccacaagtgagggatatacagcatcccagcccacgtatcagccttctcattcaacagaacagcgacctcagaaag aatcagttgaccagattcaggcttcaataaccttaagtacagatcagacaccaacatcatcgccacttccagctgcatcc cagcctcaggtatttcaggctgcctctagcaaacccttgcatagcagcggaatcaatgttaatgcagctccattccagtc catgcaaacggtatttaacatgaatgcacctgtccctcctgtcagtgagccagaaactctaaagcaacaaaatcagtacc agaccggttatagcccgacattctccaatcagccccatcaagtagaacaatcagaacttcagcaagagcagcagcttcag acagtggttggcacttaccatggttccccggaccagtcgcatcaagtggcaggtaaccaccagcagcctccacaacagaa tactgggttcccacgtaacggtcagccttattataacagccggggagtgtctcgtggtggatcacgcggcactcgaggct taatgaatggatacaggggaccagccaatgggtttagaggaggatatgatggataccgtccttcatttactaacactcca aatagtggttacacccaggcacagtttaatgctccaagagactatcccaactaccagcgggatggatatcaacagaattt caaacgtggctctggacaaagtggccctcggggagcccctcgaggtcgtggagggcccccaagacccaacaggggaatgc ctcaaatgaatgctcagcaagtgaattaatctaatactcaagattacttttaaaacgccaaaaacactggccagtgtact atatacatgttaccagaagagttatctctgttttcctttataggaagttcatagtaaagggattattttcattgcccata aagacaagactacagttttcagctttatattacctggatatggaaagaaatgccgtttgcgctgcatgttctgtcctaag cgtcaccttgagccttgcacatgagatccagacccttgctttgatttaaaacaaaaatggcagtttcagagtaaagaaaa tgtctatagttaattgaacaggcagaaataatccaactgacttcattgatgtcatatagttctgcagcaaatttggataa gaatctgtaaacccataaacgttttactcagacagttgatatatttaaacttttacattaaaaagatggaggaagtgaag tgtggcttaatagaacaacaactacatttcagctttttctgtttcattgaagcgcctgaatatttacatgcataataaag agccctgactagatattaaactggtgaacagcttaggcacacccttagctacagcacttttttattagtctgactggctg tggtaaagggatgcattaattgttttgtgtatctgttataattgtgtaaaccccaaattaagctttgattggcactttaa aattttgtgtaagaaatagaagatataatctggacagccacttgtgttttcaaatgtgaagtattgaaagagatctctcc tgaacacatttcctggatagcaatgctgtttgtaaggattggtattccttatcattccttatgatttgcacattgtctgt cattaatacttaatcttgctgtattaccaccttaataactgatgctggtactgatggaaattaatgggtatgcatactac atgtcacatgtcttttcccccctgcagcttaaaggttttgagaaatctcaaatccttgctggtgccctttaaattgctct cttttgaaaagcaccagtaaatgttttgatccatttccccttttaagggaaattacagccagcagttccaagtgagacaa ataaacatgtttatattaaaaaaaacc |
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| Transcript ID | habu1_s6237_g16994.t2 |
| Definition | - |
>habu1_s6237_g16994.t2 tagagttcaccgagtcttttcctggtgccttcccatcttccatttcttcacacactcgcacgcgggcgcgcgcatctctc acgtaagcgatgccctcggccaccagcagcgcgatggcgagcagcggcagtaaagcgggcaacgaggcaacggtagcggc ggcttcttctcaggcagcggtttcgggtggcactacgagttcggtgcagacagaggccatgaagcagattttgggtgtca tcgataagaagctgcgcaatttggagaagaaaaagagcaaacttgatgattatcaagatcgaatgaacagaggagaacgc cttaaccaagatcagctggatgctgtgtcaaagtaccaggaagtcagtaataatctggaatttgccaaggaactgcagag gagtttcatggctctaagtcaagatattcaaaaaacaataaagaagacagcccgacgggaacagctaatgagagaagaag ctgaacaaaaacatttaaagacagtacttgaattgcagtatattttggacaaattgggtgatgatgaagtgcgcagtgac ctaaaacaaggaacaaatggggtatctatattaacagaagcagaactatccacacttgacgagttttacaagctggttga acccgaacgtgatatgaacataagattgaatgaacaatatgaacaggcatccattcatttgtgggatctgttggaaggga aggaaaaacctgtatgcgggacaacatataaagccctaaaagaaattgttgaacgcattcttcaaacaagttattttgac agtgctcacaaccatcaaaatggactttgtgaagaagaagagacagcatctgcacccacagttgaagattctgtgacaga agctgagcctgaaccaacagaagaatacactgaaccaagtgaagttgaatcaacagagtatgtaaacagacagttcatgt cagaggctcagttcagcaataatgaaaaggaacaagtagacgaatggacagttgaaactgttgaggtggtaaattcactc cagcagcaaccacaggctacatctcccccacttccagatgcacatacacttacagctgtagctcaagcagatccacttat tagaagacaacgagtgcaggaccttatggcgcaaatgcaaggcccatataactttatgcaggactctatgctggaatttg agaaccaagcacttgaccctgctattgtttcagctcagcctatgaatccacaaactttgcagataccacagatggtttgc cctccagttcacgctgaatctagacttacacaaacaacccaggttcctgtacaacctgaagccacacaggtccccttggt ttcttccacaagtgagggatatacagcatcccagcccacgtatcagccttctcattcaacagaacagcgacctcagaaag aatcagttgaccagattcaggcttcaataaccttaagtacagatcagacaccaacatcatcgccacttccagctgcatcc cagcctcaggtatttcaggctgcctctagcaaacccttgcatagcagcggaatcaatgttaatgcagctccattccagtc catgcaaacggtatttaacatgaatgcacctgtccctcctgtcagtgagccagaaactctaaagcaacaaaatcagtacc agaccggttatagcccgacattctccaatcagccccatcaagtagaacaatcagaacttcagcaagagcagcagcttcag acagtggttggcacttaccatggttccccggaccagtcgcatcaagtggcaggaggatatgatggataccgtccttcatt tactaacactccaaatagtggttacacccaggcacagtttaatgctccaagagactatcccaactaccagcgggatggat atcaacagaatttcaaacgtggctctggacaaagtggccctcggggagcccctcgaggtcgtggagggcccccaagaccc aacaggggaatgcctcaaatgaatgctcagcaagtgaattaatctaatactcaagattacttttaaaacgccaaaaacac tggccagtgtactatatacatgttaccagaagagttatctctgttttcctttataggaagttcatagtaaagggattatt ttcattgcccataaagacaagactacagttttcagctttatattacctggatatggaaagaaatgccgtttgcgctgcat gttctgtcctaagcgtcaccttgagccttgcacatgagatccagacccttgctttgatttaaaacaaaaatggcagtttc agagtaaagaaaatgtctatagttaattgaacaggcagaaataatccaactgacttcattgatgtcatatagttctgcag caaatttggataagaatctgtaaacccataaacgttttactcagacagttgatatatttaaacttttacattaaaaagat ggaggaagtgaagtgtggcttaatagaacaacaactacatttcagctttttctgtttcattgaagcgcctgaatatttac atgcataataaagagccctgactagatattaaactggtgaacagcttaggcacacccttagctacagcacttttttatta gtctgactggctgtggtaaagggatgcattaattgttttgtgtatctgttataattgtgtaaaccccaaattaagctttg attggcactttaaaattttgtgtaagaaatagaagatataatctggacagccacttgtgttttcaaatgtgaagtattga aagagatctctcctgaacacatttcctggatagcaatgctgtttgtaaggattggtattccttatcattccttatgattt gcacattgtctgtcattaatacttaatcttgctgtattaccaccttaataactgatgctggtactgatggaaattaatgg gtatgcatactacatgtcacatgtcttttcccccctgcagcttaaaggttttgagaaatctcaaatccttgctggtgccc tttaaattgctctcttttgaaaagcaccagtaaatgttttgatccatttccccttttaagggaaattacagccagcagtt ccaagtgagacaaataaacatgtttatattaaaaaaaacc |
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Protein
| Protein ID | habu1_s6237_g16994.t1 |
|---|---|
| Definition | - |
>habu1_s6237_g16994.t1 MASSGSKAGNEATVAAASSQAAVSGGTTSSVQTEAMKQILGVIDKKLRNLEKKKSKLDDYQDRMNRGERLNQDQLDAVSK YQEVSNNLEFAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKHLKTVLELQYILDKLGDDEVRSDLKQGTNGVSIL TEAELSTLDEFYKLVEPERDMNIRLNEQYEQASIHLWDLLEGKEKPVCGTTYKALKEIVERILQTSYFDSAHNHQNGLCE EEETASAPTVEDSVTEAEPEPTEEYTEPSEVESTEYVNRQFMSEAQFSNNEKEQVDEWTVETVEVVNSLQQQPQATSPPL PDAHTLTAVAQADPLIRRQRVQDLMAQMQGPYNFMQDSMLEFENQALDPAIVSAQPMNPQTLQIPQMVCPPVHAESRLTQ TTQVPVQPEATQVPLVSSTSEGYTASQPTYQPSHSTEQRPQKESVDQIQASITLSTDQTPTSSPLPAASQPQVFQAASSK PLHSSGINVNAAPFQSMQTVFNMNAPVPPVSEPETLKQQNQYQTGYSPTFSNQPHQVEQSELQQEQQLQTVVGTYHGSPD QSHQVAGNHQQPPQQNTGFPRNGQPYYNSRGVSRGGSRGTRGLMNGYRGPANGFRGGYDGYRPSFTNTPNSGYTQAQFNA PRDYPNYQRDGYQQNFKRGSGQSGPRGAPRGRGGPPRPNRGMPQMNAQQVN |
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| Protein ID | habu1_s6237_g16994.t2 |
| Definition | - |
>habu1_s6237_g16994.t2 MASSGSKAGNEATVAAASSQAAVSGGTTSSVQTEAMKQILGVIDKKLRNLEKKKSKLDDYQDRMNRGERLNQDQLDAVSK YQEVSNNLEFAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKHLKTVLELQYILDKLGDDEVRSDLKQGTNGVSIL TEAELSTLDEFYKLVEPERDMNIRLNEQYEQASIHLWDLLEGKEKPVCGTTYKALKEIVERILQTSYFDSAHNHQNGLCE EEETASAPTVEDSVTEAEPEPTEEYTEPSEVESTEYVNRQFMSEAQFSNNEKEQVDEWTVETVEVVNSLQQQPQATSPPL PDAHTLTAVAQADPLIRRQRVQDLMAQMQGPYNFMQDSMLEFENQALDPAIVSAQPMNPQTLQIPQMVCPPVHAESRLTQ TTQVPVQPEATQVPLVSSTSEGYTASQPTYQPSHSTEQRPQKESVDQIQASITLSTDQTPTSSPLPAASQPQVFQAASSK PLHSSGINVNAAPFQSMQTVFNMNAPVPPVSEPETLKQQNQYQTGYSPTFSNQPHQVEQSELQQEQQLQTVVGTYHGSPD QSHQVAGGYDGYRPSFTNTPNSGYTQAQFNAPRDYPNYQRDGYQQNFKRGSGQSGPRGAPRGRGGPPRPNRGMPQMNAQQ VN |
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