Gene
| Gene Model ID | habu1_s6274_g17022 |
|---|---|
| Locus | habu1_scaffold6274 : 39636 ... 69000 : + |
| To GenomeBrowser | habu1_scaffold6274:39636..69000 |
| Genes list of scaffold | habu1_scaffold6274 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| polyribonucleotide nucleotidyltransferase mitochondrial | EC:2.7.7.8 GO:0000175 GO:0000958 GO:0000962 GO:0000964 GO:0004654 GO:0005758 GO:0006144 GO:0006206 GO:0008266 GO:0034046 GO:0034599 GO:0035198 GO:0035458 GO:0035928 GO:0043457 GO:0044822 GO:0045025 GO:0045926 GO:0061014 GO:0070207 GO:0070584 GO:0071042 GO:0071850 GO:0090503 GO:0097222 GO:2000627 GO:2000772 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6274_g17022.t2 | 2 | 1 | RNase_PH | 26 | 155 | 5.60001e-41 | 139.9 | 4.4e-19 | 9.2e-16 | 58.3 |
| habu1_s6274_g17022.t2 | 2 | 1 | RNase_PH_C | 158 | 222 | 2.5e-22 | 78.5 | 1.8e-14 | 3.9e-11 | 42.7 |
| habu1_s6274_g17022.t2 | 1 | 1 | PNPase | 259 | 335 | 6.1e-09 | 36.0 | 2.9e-12 | 6.1e-09 | 36.0 |
| habu1_s6274_g17022.t2 | 2 | 2 | RNase_PH | 339 | 473 | 5.60001e-41 | 139.9 | 2.0e-25 | 4.3e-22 | 78.8 |
| habu1_s6274_g17022.t2 | 2 | 2 | RNase_PH_C | 477 | 552 | 2.5e-22 | 78.5 | 1.5e-11 | 3.3e-08 | 33.3 |
| habu1_s6274_g17022.t2 | 1 | 1 | KH_1 | 580 | 637 | 7.5e-07 | 28.7 | 9.8e-10 | 2.1e-06 | 27.2 |
| habu1_s6274_g17022.t2 | 1 | 1 | S1 | 651 | 723 | 9.5e-07 | 28.8 | 2.7e-09 | 5.7e-06 | 26.3 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.1 |
| Venom grand-1 | 4.0 |
| Pit, infrared sensing | 5.1 |
| Nose | 4.8 |
| Brain-1 | 5.3 |
| Eye | 4.7 |
| fetal fibroblast | 21.0 |
| venom gland-2 | 4.6 |
| Brain-2 | 5.5 |
| Spleen | 3.8 |
| Lung | 2.4 |
| Liver | 4.8 |
| Kidney | 5.0 |
| Pancreas | 4.1 |
| Small intestine | 2.6 |
| Large intestine | 2.4 |
| Stomach | 3.3 |
| heart | 9.9 |
| ovary | 48.8 |
| cheek muscle | 6.3 |
Transcript
| Transcript ID | habu1_s6274_g17022.t1 |
|---|---|
| Definition | - |
>habu1_s6274_g17022.t1 cgcagagccaatcagctgtatcttaatgggaagcaagtgccttgccgggtgattcttagcgttatggctgcttgctgtgc tgcttgctgttcgtggctgagatggaggacgaagtcagtggggactgctgtgatagcagcctcccgcgaagtaggcccta tgggtcttcggttgagagggcccggctgccttcgccttatgcggctgagttcgacgacaagctttaatagctcttctgcc acctctgtagcgatgactgtggatgttggaagcaagaaattggaaatatcttcaggaaaactagccagatttgctgatgg ttgtgctgtagttaagctaggtgatacagcagtgatggtgacagcggtcagtaaatcaaaagcttctcaagctcagttcc tgcctttggtggttgactatcggcaaaagggtgctgctgtaggaagaatacctaccaattacttgagaagagaactgggt actacagatcatgaaattcttacaagcagattaatagatcggtcaatccgaccactttttccagccggctactgttacga tacacagatcatttgtaatcttctagctgtagatgatgcctacagtcctgaggtacaggcaattaatgcagcttccgcag ctcttgcattatcagacattccatggaatggacctattggagctgtaagagttggaatgattgatggagaagttgttgtt aatcccactcgaaaagaaatggcttctagtactttgaatttagtggtttctggagcccctcggagccatattgttatgtt ggaagctgcagcagacaacatcctgcaacaggatttctgccatgccatcaaagtaggtttgaagcatacccagcagatca ttcaaggcatacagcagctggaaagagagcaaagaatcaaaaagagaactgaccagaagttattcactgcccctgaggag attgtgaaatatgcacaacaacttgcatctgaaaaagtcacagcagtattttcagacttcacacatgataaaatttcaag agatgaagctatcaacaaaatcaggcttgaaacagaagaacagctaaaagaaaagtttccagaggcagattcttatgaaa tcatggaatcatttaatgttgttaccaaggaaatctttagaaatcttatcatgaatgaataccgaagatgtgatggtaga gatttcaccacacttagaaatatcagttgtgaagtggacttgtttaaaactttgcatggttcagctttatttcaaagggg acaaacacaggtcctctgtacagttacatttgattcgttagaatcaagtattaaatcagatcttattacaacagtagtca gtggaataaaagataaaaactttatgcttcattatgagttccctccatatgcaactaatgagattggcagagtttcaggt tcaaataggagagaacttggtcatggtgcacttgcagagaaggctttgaaatcggtgattccaagtaatttccccttcac aataagagttacttcagaagttttagaatcaaatgggtcatcatcgatggcttctgtttgtggtgggagtctagccttga tggatgcaggagttcccatatcatctcccgtagcaggtgttgctgttggtttgattaccaagccaaatcctgaaaaaaat ggagatattgaaaattattgcctactaacagacattctgggaatagaggattataatggtgatatggacttcaagatggc tgggacaaataaaggaatcactgccttacaggctgatatcaagataccaggaatacctttaaaaattgtaatggaagcta ttcaacaagctacagttgcaaagaaagaggtcttgcaaattatgaacaaagtaattgcaaaacctagaccaagcagaaaa gagaatggaccacttacagaaactattcaggtatcattgtcaaaaagagcaagatttcttggaccaggaggttataattt aaagaaacttcgagctgaaactggggtaactgttagccaagtagatgaagagactttttccatatttgctccagtaccag aagctatgtatgaagcaaaagaatttattaaggaattatgcaaagatgatcaagactatcagttggaatttggagctatt tatacagcaacaataattgaattaagagatgctggggtaatggtaaaattatacccaaatatgactcctgttctacttca caactcgcagttggatcaaagaaagattaagcatcctagtgctattggattacaagttggtcaagaaatccaggtgaaat actttggacgtgatccaactgatggaagaatgaggctttcacgaaaagtacttcagagtccagctacatctgttgttaaa acactgaatgacaaaaaaagtatagtaataggaagtgcagttcatgagtctgccaattcagcgtagcacaagaatccttc tgaactagtagaactgttccctttgatagaaactgagaaattactggtaatatatacaggtttctatatgcccatgtaca ttttaaatttcataaaaatatgatttaataccagctaa |
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| Transcript ID | habu1_s6274_g17022.t2 |
| Definition | - |
>habu1_s6274_g17022.t2 cgcagagccaatcagctgtatcttaatgggaagcaagtgccttgccgggtgattcttagcgttatggctgcttgctgtgc tgcttgctgttcgtggctgagatggaggacgaagtcagtggggactgctgtgatagcagcctcccgcgaagtaggcccta tgggtcttcggttgagagggcccggctgccttcgccttatgcggctgagttcgacgacaagctttaatagctcttctgcc acctctgtagcgatgactgtggatgttggaagcaagaaattggaaatatcttcaggaaaactagccagatttgctgatgg ttgtgctgtagttaagctaggtgatacagcagtgatggtgacagcggtcagtaaatcaaaagcttctcaagctcagttcc tgcctttggtggttgactatcggcaaaagggtgctgctgtaggaagaatacctaccaattacttgagaagagaactgggt actacagatcatgaaattcttacaagcagattaatagatcggtcaatccgaccactttttccagccggctactgttacga tacacagatcatttgtaatcttctagctgtagatgatgcctacagtcctgaggtacaggcaattaatgcagcttccgcag ctcttgcattatcagacattccatggaatggacctattggagctgtaagagttggaatgattgatggagaagttgttgtt aatcccactcgaaaagaaatggcttctagtactttgaatttagtggtttctggagcccctcggagccatattgttatgtt ggaagctgcagcagacaacatcctgcaacaggatttctgccatgccatcaaagtaggtttgaagcatacccagcagatca ttcaaggcatacagcagctggaaagagagcaaagaatcaaaaagagaactgaccagaagttattcactgcccctgaggag attgtgaaatatgcacaacaacttgcatctgaaaaagtcacagcagtattttcagacttcacacatgataaaatttcaag agatgaagctatcaacaaaatcaggcttgaaacagaagaacagctaaaagaaaagtttccagaggcagattcttatgaaa tcatggaatcatttaatgttgttaccaaggaaatctttagaaatcttatcatgaatgaataccgaagatgtgatggtaga gatttcaccacacttagaaatatcagttgtgaagtggacttgtttaaaactttgcatggttcagctttatttcaaagggg acaaacacaggtcctctgtacagttacatttgattcgttagaatcaagtattaaatcagatcttattacaacagtagtca gtggaataaaagataaaaactttatgcttcattatgagttccctccatatgcaactaatgagattggcagagtttcaggt tcaaataggagagaacttggtcatggtgcacttgcagagaaggctttgaaatcggtgattccaagtaatttccccttcac aataagagttacttcagaagttttagaatcaaatgggtcatcatcgatggcttctgtttgtggtgggagtctagccttga tggatgcaggagttcccatatcatctcccgtagcaggtgttgctgttggtttgattaccaagccaaatcctgaaaaaaat ggagatattgaaaattattgcctactaacagacattctgggaatagaggattataatggtgatatggacttcaagatggc tgggacaaataaaggaatcactgccttacaggctgatatcaagataccaggaatacctttaaaaattgtaatggaagcta ttcaacaagctacagttgcaaagaaagaggtcttgcaaattatgaacaaagtaattgcaaaacctagaccaagcagaaaa gagaatggaccacttacagaaactattcaggtatcattgtcaaaaagagcaagatttcttggaccaggaggttataattt aaagaaacttcgagctgaaactggggtaactgttagccaagtagatgaagagactttttccatatttgctccagtaccag aagctatgtatgaagcaaaagaatttattaaggaattatgcaaagatgatcaagactatcagttggaatttggagctatt tatacagcaacaataattgaattaagagatgctggggtaatggtaaaattatacccaaatatgactcctgttctacttca caactcgcagttggatcaaagaaagattaagcatcctagtgctattggattacaagttggtcaagaaatccaggtgaaat actttggacgtgatccaactgatggaagaatgaggctttcacgaaaagtacttcagagtccagctacatctgttgttaaa acactgaatgacaaaaaaagtatagtaataggaagtgcagttcatgagtctgccaattcagcgtagcacaagaatccttc tgaactagtagaactgttccctttgatagaaactgagaaattactggtaatatatacaggtttctatatgcccatgtaca ttttaaatttcataaaaatatgatttaataccagctaa |
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Protein
| Protein ID | habu1_s6274_g17022.t1 |
|---|---|
| Definition | - |
>habu1_s6274_g17022.t1 MGLRLRGPGCLRLMRLSSTTSFNSSSATSVAMTVDVGSKKLEISSGKLARFADGCAVVKLGDTAVMVTAVSKSKASQAQF LPLVVDYRQKGAAVGRIPTNYLRRELGTTDHEILTSRLIDRSIRPLFPAGYCYDTQIICNLLAVDDAYSPEVQAINAASA ALALSDIPWNGPIGAVRVGMIDGEVVVNPTRKEMASSTLNLVVSGAPRSHIVMLEAAADNILQQDFCHAIKVGLKHTQQI IQGIQQLEREQRIKKRTDQKLFTAPEEIVKYAQQLASEKVTAVFSDFTHDKISRDEAINKIRLETEEQLKEKFPEADSYE IMESFNVVTKEIFRNLIMNEYRRCDGRDFTTLRNISCEVDLFKTLHGSALFQRGQTQVLCTVTFDSLESSIKSDLITTVV SGIKDKNFMLHYEFPPYATNEIGRVSGSNRRELGHGALAEKALKSVIPSNFPFTIRVTSEVLESNGSSSMASVCGGSLAL MDAGVPISSPVAGVAVGLITKPNPEKNGDIENYCLLTDILGIEDYNGDMDFKMAGTNKGITALQADIKIPGIPLKIVMEA IQQATVAKKEVLQIMNKVIAKPRPSRKENGPLTETIQVSLSKRARFLGPGGYNLKKLRAETGVTVSQVDEETFSIFAPVP EAMYEAKEFIKELCKDDQDYQLEFGAIYTATIIELRDAGVMVKLYPNMTPVLLHNSQLDQRKIKHPSAIGLQVGQEIQVK YFGRDPTDGRMRLSRKVLQSPATSVVKTLNDKKSIVIGSAVHESANSA |
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| Protein ID | habu1_s6274_g17022.t2 |
| Definition | - |
>habu1_s6274_g17022.t2 MRLSSTTSFNSSSATSVAMTVDVGSKKLEISSGKLARFADGCAVVKLGDTAVMVTAVSKSKASQAQFLPLVVDYRQKGAA VGRIPTNYLRRELGTTDHEILTSRLIDRSIRPLFPAGYCYDTQIICNLLAVDDAYSPEVQAINAASAALALSDIPWNGPI GAVRVGMIDGEVVVNPTRKEMASSTLNLVVSGAPRSHIVMLEAAADNILQQDFCHAIKVGLKHTQQIIQGIQQLEREQRI KKRTDQKLFTAPEEIVKYAQQLASEKVTAVFSDFTHDKISRDEAINKIRLETEEQLKEKFPEADSYEIMESFNVVTKEIF RNLIMNEYRRCDGRDFTTLRNISCEVDLFKTLHGSALFQRGQTQVLCTVTFDSLESSIKSDLITTVVSGIKDKNFMLHYE FPPYATNEIGRVSGSNRRELGHGALAEKALKSVIPSNFPFTIRVTSEVLESNGSSSMASVCGGSLALMDAGVPISSPVAG VAVGLITKPNPEKNGDIENYCLLTDILGIEDYNGDMDFKMAGTNKGITALQADIKIPGIPLKIVMEAIQQATVAKKEVLQ IMNKVIAKPRPSRKENGPLTETIQVSLSKRARFLGPGGYNLKKLRAETGVTVSQVDEETFSIFAPVPEAMYEAKEFIKEL CKDDQDYQLEFGAIYTATIIELRDAGVMVKLYPNMTPVLLHNSQLDQRKIKHPSAIGLQVGQEIQVKYFGRDPTDGRMRL SRKVLQSPATSVVKTLNDKKSIVIGSAVHESANSA |
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