Gene
| Gene Model ID | habu1_s6274_g17026 |
|---|---|
| Locus | habu1_scaffold6274 : 263845 ... 265695 : - |
| To GenomeBrowser | habu1_scaffold6274:263845..265695 |
| Genes list of scaffold | habu1_scaffold6274 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| prolyl-trna synthetase associated domain-containing protein 1-like | GO:0002161 GO:0004812 GO:0006418 GO:0006450 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6274_g17026.t1 | 1 | 1 | tRNA_edit | 31 | 160 | 8.9e-25 | 86.9 | 2.2e-28 | 1.1e-24 | 86.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6274_g17026.t1 | gi|602655470|ref|XP_007433483.1| | PREDICTED: prolyl-tRNA synthetase associated domain-containing protein 1-like [Python bivittatus] | 0.0 |
| habu1_s6274_g17026.t1 | gi|327262751|ref|XP_003216187.1| | PREDICTED: prolyl-tRNA synthetase associated domain-containing protein 1-like [Anolis carolinensis] | 0.0 |
| habu1_s6274_g17026.t1 | gi|696974456|ref|XP_009556884.1| | PREDICTED: prolyl-tRNA synthetase associated domain-containing protein 1-like [Cuculus canorus] | 0.0 |
| habu1_s6274_g17026.t1 | gi|542156091|ref|XP_005486853.1| | PREDICTED: prolyl-tRNA synthetase associated domain-containing protein 1-like [Zonotrichia albicollis] | 0.0 |
| habu1_s6274_g17026.t1 | gi|729752988|ref|XP_010573165.1| | PREDICTED: prolyl-tRNA synthetase associated domain-containing protein 1-like [Haliaeetus leucocephalus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.2 |
| Venom grand-1 | 3.4 |
| Pit, infrared sensing | 3.1 |
| Nose | 3.6 |
| Brain-1 | 1.5 |
| Eye | 3.3 |
| fetal fibroblast | 4.4 |
| venom gland-2 | 6.8 |
| Brain-2 | 1.2 |
| Spleen | 4.4 |
| Lung | 1.5 |
| Liver | 3.5 |
| Kidney | 3.9 |
| Pancreas | 8.1 |
| Small intestine | 4.2 |
| Large intestine | 3.5 |
| Stomach | 4.3 |
| heart | 2.4 |
| ovary | 23.8 |
| cheek muscle | 4.7 |
Transcript
| Transcript ID | habu1_s6274_g17026.t1 |
|---|---|
| Definition | - |
>habu1_s6274_g17026.t1 tcgagaaaggcgtctccgcctcctgctcaagtcttcccgaaaggcttgcggcaagcacggtggagagtggctgcaatggc cgagccgcctcctccaatgagggggcttcgagaagcgctggaggctcatctgcagggcctgggcatccaagcactcagtg tggaacatccggcagtattcacagttgaagaaatgatgccttatgtacaacatttaaatggagctcacagcaaaaacctt ttccttaaagataagaggaaaaaaggcttttggctggtgacagttctgcacgatcgacaaatcaatttaaatgatttggc taagaaactgggtgttggaagtgggaacctgcgctttgctgatgaagcagccatgttggataagctgaaagttggccaag gatgtgcaacccccttagctcttttctgtgatcagggaaatgtgaactttgttttggatgctggctttctggaaggaggt catgataggctttattttcatccaatgaccaatgcagcaactatgggcctgcacccagacgacttcctaaaatttctgaa gtccacaggacatgaaccaataattgtgcattttgatgaaagccacaagtagctttgtaacccaatagagtaactgggtt ggaacttggaacttctttaacacacataatgaaatcctgcattcggaaaggtttctagggtagaagtcatcattggaaaa tcatgggagtaaatctccactctttttagtacatttagtgctgatatttatgactcattcattcatgatttataagatta gtaaaacgcgctatttgtgcactatac |
|
Protein
| Protein ID | habu1_s6274_g17026.t1 |
|---|---|
| Definition | - |
>habu1_s6274_g17026.t1 MAEPPPPMRGLREALEAHLQGLGIQALSVEHPAVFTVEEMMPYVQHLNGAHSKNLFLKDKRKKGFWLVTVLHDRQINLND LAKKLGVGSGNLRFADEAAMLDKLKVGQGCATPLALFCDQGNVNFVLDAGFLEGGHDRLYFHPMTNAATMGLHPDDFLKF LKSTGHEPIIVHFDESHK |
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