Gene
| Gene Model ID | habu1_s6274_g17029 |
|---|---|
| Locus | habu1_scaffold6274 : 297576 ... 317165 : + |
| To GenomeBrowser | habu1_scaffold6274:297576..317165 |
| Genes list of scaffold | habu1_scaffold6274 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6274_g17029.t3 | 1 | 1 | Clathrin_H_link | 182 | 240 | 2.8e-21 | 75.1 | 1.4e-24 | 7.1e-21 | 73.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6274_g17029.t3 | gi|641764341|ref|XP_008167301.1| | PREDICTED: clathrin heavy chain linker domain-containing protein 1 isoform X2 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.9 |
| Venom grand-1 | 8.3 |
| Pit, infrared sensing | 6.3 |
| Nose | 9.3 |
| Brain-1 | 4.4 |
| Eye | 5.7 |
| fetal fibroblast | 4.2 |
| venom gland-2 | 4.5 |
| Brain-2 | 4.4 |
| Spleen | 5.3 |
| Lung | 5.6 |
| Liver | 10.9 |
| Kidney | 6.4 |
| Pancreas | 5.4 |
| Small intestine | 5.1 |
| Large intestine | 5.7 |
| Stomach | 8.3 |
| heart | 7.0 |
| ovary | 13.2 |
| cheek muscle | 8.0 |
Transcript
| Transcript ID | habu1_s6274_g17029.t1 |
|---|---|
| Definition | - |
>habu1_s6274_g17029.t1 aagaatcatcagaattctaagccgaatgttaagtagaccggaagagggagaaaggaagtgtggaggaaaactacacttcc catcagtcccccgaaggccgctagtttttcctcccttcctgattaacaattccgccttgttgctaccattagttggcttc taggagagttagttggatgaaagagggtagaatggtgatggtgctgaaatcctgtctcagtgccaggagattgtgaggat ctggatgacagaaaataggattaaattgaaccctacctagcaagatggagttactgtttgcccattagaactcttggtct gctccagctgtgtctcttgatattggatattattcctaatggagcaagtctgcaggagaagccatagccaggttttgact gaagcatgccttctgatcagagtaaaggactgacaccttagttgctatttgcaacggaaattaggtatcttctgcaccat gaaatcagctggtgttggagcaagtaaacactcagtgcttcctcccatcatcccagatactgacaaggaatttctggaaa gcattcagagttatatcatttcagagattgaaaacgtggggtgtactgagcaaggaccagcagaggattattacacaata tacagaaatgtatttgaaatgataattgagcatgttaatgcatacaaaagcattttgaccacaatcaagcaagaatatga tgcttttatagaagcaataaagaagggccagcatgatgccttttatcttcatggaaaattaaaaatgttagcatgtgaat cttcaactttaatgtattataagaaaagaataactcagctggaagaaaaagtgaaaagaattgagaagaattctgcaaga attgagagcttaatacagaaactaaaaagtttaaggttaacactcttagcaaaagaagattcaatcccagttaagaaagt taatcctgctaaaaaaattccaggacttaacgtgaaagactcgcttgatatagatgtcctttctaaccacttagctcatc tacaaaaaaggttgaaggagttgaaagaggacatgtttacaaaatacattcctatagaaaacacagccaatgttgaagaa gacatgaattacgctgttcaaaagcgaaatatggctgaaaaaaagaatgaaagcctgaagttttgtttttatcggctaaa tctgtttgcaagtgtgattagtatctgggagagtacagacaagaatattgacactctgcagcagctcatatatcagatga tagaaaatgagaaacttataaaaggttcaattgcttctagtatctcaagtgtatttgaacgtgatccttctaaaagtaaa gaggcagaagatctgattgaatatattgaacggttcaatgaactgttttcccgtggtcagtatgaggctgcagcaacata tgcagcaaactgtcctagaggaatcctacgcaatgaagaaaccttggagaaatttagggctgttggtcatgttaaaggga agatcctccctctgcttttgtattgtgatgcactcataactacaaccattgctgttaagaagcatcttcctgcaaatttg acaactgaagccatcaaatgtgccttagctgagaaacggttggacttggtgatgcattgggtcactttgcacaaattgga attctctgaggctgctggtgatgcaatctataagtatgcagatgtggatatacacaacatgtcccagtgtctagctttgg ctcaaattgcatacagtgagtgtggggcgcacaaaaaagctgttctgtgcttgtgcagacagggccagatttatggagcc atggattatctacatcatttccaacttctttccacagaggattatgtctttctactgaagcattgtcctcgtatagattt catccgttgccttactcaagaatggaatgggaaacaaccaatcatgtcccttggggaaaccatcctttctctcattggaa cagaacatcaaatacatggcatacgcttgttggaggatattaccaaaaagggcaaggatacattggagcaaatgattgta aacgatacctgcaatatagaaggatggaaggagatagctgaaacatgcctcagtgtcaaaaaagaaaatttatacaaact tatcatctctgtccttgctagcctagaaggagtgtttgaaattccagcagatgatacagaggatgccaaattaatggaac atgtgttcttgtaatttttccacaaagcacgtggaggagctctttctcccaggagttgtttatattagctacagttgcta ctcatgcttgattatttgctcttattttactttaaaaatgatgtcactttttaaaataatttagctatgtttacaccaga ttacttgtgatttttcttccctttttaagtaatttattttctcctatttttttcttcatagggacaggaagttgaaccag ttgttggagaaacagtctttcatctccccaaaactcacatttgtttaatttttaacataatattgcttttatgcttatgc acttagtggcaaaattagaaattatctccaatgtacacatggataagatgctcataacttagctacacagttattctttc cattctatgaactggactgaaactggaataattcctagtttctcccacagaatcaatatttttgtggtctaatagttata taacttttgtagtctttctaagtgtggttgttggattatgaaaggtatagtcccaatgcaccctgaaggtaccaggtggt gtttaggctaccctattttattgaacatagattcagcattgatttatatttatgctataaatacgttatgtagaaaaaaa acatcctattatgtatcattttgttatacttcagactcttgagtactaacaaataaagcaagttactaaaattgtatct |
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| Transcript ID | habu1_s6274_g17029.t2 |
| Definition | - |
>habu1_s6274_g17029.t2 aagaatcatcagaattctaagccgaatgttaagtagaccggaagagggagaaaggaagtgtggaggaaaactacacttcc catcagtcccccgaaggccgctagtttttcctcccttcctgattaacaattccgccttgttgctaccattagttggcttc taggagagttagttggatgaaagaggttttgactgaagcatgccttctgatcagagtaaaggactgacaccttagttgct atttgcaacggaaattaggtatcttctgcaccatgaaatcagctggtgttggagcaagtaaacactcagtgcttcctccc atcatcccagatactgacaaggaatttctggaaagcattcagagttatatcatttcagagattgaaaacgtggggtgtac tgagcaaggaccagcagaggattattacacaatatacagaaatgtatttgaaatgataattgagcatgttaatgcataca aaagcattttgaccacaatcaagcaagaatatgatgcttttatagaagcaataaagaagggccagcatgatgccttttat cttcatggaaaattaaaaatgttagcatgtgaatcttcaactttaatgtattataagaaaagaataactcagctggaaga aaaagtgaaaagaattgagaagaattctgcaagaattgagagcttaatacagaaactaaaaagtttaaggttaacactct tagcaaaagaagattcaatcccagttaagaaagttaatcctgctaaaaaaattccaggacttaacgtgaaagactcgctt gatatagatgtcctttctaaccacttagctcatctacaaaaaaggttgaaggagttgaaagaggacatgtttacaaaata cattcctatagaaaacacagccaatgttgaagaagacatgaattacgctgttcaaaagcgaaatatggctgaaaaaaaga atgaaagcctgaagttttgtttttatcggctaaatctgtttgcaagtgtgattagtatctgggagagtacagacaagaat attgacactctgcagcagctcatatatcagatgatagaaaatgagaaacttataaaaggttcaattgcttctagtatctc aagtgtatttgaacgtgatccttctaaaagtaaagaggcagaagatctgattgaatatattgaacggttcaatgaactgt tttcccgtggtcagtatgaggctgcagcaacatatgcagcaaactgtcctagaggaatcctacgcaatgaagaaaccttg gagaaatttagggctgttggtcatgttaaagggaagatcctccctctgcttttgtattgtgatgcactcataactacaac cattgctgttaagaagcatcttcctgcaaatttgacaactgaagccatcaaatgtgccttagctgagaaacggttggact tggtgatgcattgggtcactttgcacaaattggaattctctgaggctgctggtgatgcaatctataagtatgcagatgtg gatatacacaacatgtcccagtgtctagctttggctcaaattgcatacagtgagtgtggggcgcacaaaaaagctgttct gtgcttgtgcagacagggccagatttatggagccatggattatctacatcatttccaacttctttccacagaggattatg tctttctactgaagcattgtcctcgtatagatttcatccgttgccttactcaagaatggaatgggaaacaaccaatcatg tcccttggggaaaccatcctttctctcattggaacagaacatcaaatacatggcatacgcttgttggaggatattaccaa aaagggcaaggatacattggagcaaatgattgtaaacgatacctgcaatatagaaggatggaaggagatagctgaaacat gcctcagtgtcaaaaaagaaaatttatacaaacttatcatctctgtccttgctagcctagaaggagtgtttgaaattcca gcagatgatacagaggatgccaaattaatggaacatgtgttcttgtaatttttccacaaagcacgtggaggagctctttc tcccaggagttgtttatattagctacagttgctactcatgcttgattatttgctcttattttactttaaaaatgatgtca ctttttaaaataatttagctatgtttacaccagattacttgtgatttttcttccctttttaagtaatttattttctccta tttttttcttcatagggacaggaagttgaaccagttgttggagaaacagtctttcatctccccaaaactcacatttgttt aatttttaacataatattgcttttatgcttatgcacttagtggcaaaattagaaattatctccaatgtacacatggataa gatgctcataacttagctacacagttattctttccattctatgaactggactgaaactggaataattcctagtttctccc acagaatcaatatttttgtggtctaatagttatataacttttgtagtctttctaagtgtggttgttggattatgaaaggt atagtcccaatgcaccctgaaggtaccaggtggtgtttaggctaccctattttattgaacatagattcagcattgattta tatttatgctataaatacgttatgtagaaaaaaaacatcctattatgtatcattttgttatacttcagactcttgagtac taacaaataaagcaagttactaaaattgtatct |
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| Transcript ID | habu1_s6274_g17029.t3 |
| Definition | - |
>habu1_s6274_g17029.t3 aagaatcatcagaattctaagccgaatgttaagtagaccggaagagggagaaaggaagtgtggaggaaaactacacttcc catcagtcccccgaaggccgctagtttttcctcccttcctgattaacaattccgccttgttgctaccattagttggcttc taggagagttagttggatgaaagaggttttgactgaagcatgccttctgatcagagtaaaggactgacaccttagttgct atttgcaacggaaattaggtatcttctgcaccatgaaatcagctggtgttggagcaagtaaacactcagtgcttcctccc atcatcccagatactgacaaggaatttctggaaagcattcagagttatatcatttcagagattgaaaacgtggggtgtac tgagcaaggaccagcagaggattattacacaatatacagaaatgtatttgaaatgagtgaaaagaattgagaagaattct gcaagaattgagagcttaatacagaaactaaaaagtttaaggttaacactcttagcaaaagaagattcaatcccagttaa gaaagttaatcctgctaaaaaaattccaggacttaacgtgaaagactcgcttgatatagatgtcctttctaaccacttag ctcatctacaaaaaaggttgaaggagttgaaagaggacatgtttacaaaatacattcctatagaaaacacagccaatgtt gaagaagacatgaattacgctgttcaaaagcgaaatatggctgaaaaaaagaatgaaagcctgaagttttgtttttatcg gctaaatctgtttgcaagtgtgattagtatctgggagagtacagacaagaatattgacactctgcagcagctcatatatc agatgatagaaaatgagaaacttataaaaggttcaattgcttctagtatctcaagtgtatttgaacgtgatccttctaaa agtaaagaggcagaagatctgattgaatatattgaacggttcaatgaactgttttcccgtggtcagtatgaggctgcagc aacatatgcagcaaactgtcctagaggaatcctacgcaatgaagaaaccttggagaaatttagggctgttggtcatgtta aagggaagatcctccctctgcttttgtattgtgatgcactcataactacaaccattgctgttaagaagcatcttcctgca aatttgacaactgaagccatcaaatgtgccttagctgagaaacggttggacttggtgatgcattgggtcactttgcacaa attggaattctctgaggctgctggtgatgcaatctataagtatgcagatgtggatatacacaacatgtcccagtgtctag ctttggctcaaattgcatacagtgagtgtggggcgcacaaaaaagctgttctgtgcttgtgcagacagggccagatttat ggagccatggattatctacatcatttccaacttctttccacagaggattatgtctttctactgaagcattgtcctcgtat agatttcatccgttgccttactcaagaatggaatgggaaacaaccaatcatgtcccttggggaaaccatcctttctctca ttggaacagaacatcaaatacatggcatacgcttgttggaggatattaccaaaaagggcaaggatacattggagcaaatg attgtaaacgatacctgcaatatagaaggatggaaggagatagctgaaacatgcctcagtgtcaaaaaagaaaatttata caaacttatcatctctgtccttgctagcctagaaggagtgtttgaaattccagcagatgatacagaggatgccaaattaa tggaacatgtgttcttgtaatttttccacaaagcacgtggaggagctctttctcccaggagttgtttatattagctacag ttgctactcatgcttgattatttgctcttattttactttaaaaatgatgtcactttttaaaataatttagctatgtttac accagattacttgtgatttttcttccctttttaagtaatttattttctcctatttttttcttcatagggacaggaagttg aaccagttgttggagaaacagtctttcatctccccaaaactcacatttgtttaatttttaacataatattgcttttatgc ttatgcacttagtggcaaaattagaaattatctccaatgtacacatggataagatgctcataacttagctacacagttat tctttccattctatgaactggactgaaactggaataattcctagtttctcccacagaatcaatatttttgtggtctaata gttatataacttttgtagtctttctaagtgtggttgttggattatgaaaggtatagtcccaatgcaccctgaaggtacca ggtggtgtttaggctaccctattttattgaacatagattcagcattgatttatatttatgctataaatacgttatgtaga aaaaaaacatcctattatgtatcattttgttatacttcagactcttgagtactaacaaataaagcaagttactaaaattg tatct |
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Protein
| Protein ID | habu1_s6274_g17029.t1 |
|---|---|
| Definition | - |
>habu1_s6274_g17029.t1 MKSAGVGASKHSVLPPIIPDTDKEFLESIQSYIISEIENVGCTEQGPAEDYYTIYRNVFEMIIEHVNAYKSILTTIKQEY DAFIEAIKKGQHDAFYLHGKLKMLACESSTLMYYKKRITQLEEKVKRIEKNSARIESLIQKLKSLRLTLLAKEDSIPVKK VNPAKKIPGLNVKDSLDIDVLSNHLAHLQKRLKELKEDMFTKYIPIENTANVEEDMNYAVQKRNMAEKKNESLKFCFYRL NLFASVISIWESTDKNIDTLQQLIYQMIENEKLIKGSIASSISSVFERDPSKSKEAEDLIEYIERFNELFSRGQYEAAAT YAANCPRGILRNEETLEKFRAVGHVKGKILPLLLYCDALITTTIAVKKHLPANLTTEAIKCALAEKRLDLVMHWVTLHKL EFSEAAGDAIYKYADVDIHNMSQCLALAQIAYSECGAHKKAVLCLCRQGQIYGAMDYLHHFQLLSTEDYVFLLKHCPRID FIRCLTQEWNGKQPIMSLGETILSLIGTEHQIHGIRLLEDITKKGKDTLEQMIVNDTCNIEGWKEIAETCLSVKKENLYK LIISVLASLEGVFEIPADDTEDAKLMEHVFL |
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| Protein ID | habu1_s6274_g17029.t2 |
| Definition | - |
>habu1_s6274_g17029.t2 MKSAGVGASKHSVLPPIIPDTDKEFLESIQSYIISEIENVGCTEQGPAEDYYTIYRNVFEMIIEHVNAYKSILTTIKQEY DAFIEAIKKGQHDAFYLHGKLKMLACESSTLMYYKKRITQLEEKVKRIEKNSARIESLIQKLKSLRLTLLAKEDSIPVKK VNPAKKIPGLNVKDSLDIDVLSNHLAHLQKRLKELKEDMFTKYIPIENTANVEEDMNYAVQKRNMAEKKNESLKFCFYRL NLFASVISIWESTDKNIDTLQQLIYQMIENEKLIKGSIASSISSVFERDPSKSKEAEDLIEYIERFNELFSRGQYEAAAT YAANCPRGILRNEETLEKFRAVGHVKGKILPLLLYCDALITTTIAVKKHLPANLTTEAIKCALAEKRLDLVMHWVTLHKL EFSEAAGDAIYKYADVDIHNMSQCLALAQIAYSECGAHKKAVLCLCRQGQIYGAMDYLHHFQLLSTEDYVFLLKHCPRID FIRCLTQEWNGKQPIMSLGETILSLIGTEHQIHGIRLLEDITKKGKDTLEQMIVNDTCNIEGWKEIAETCLSVKKENLYK LIISVLASLEGVFEIPADDTEDAKLMEHVFL |
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| Protein ID | habu1_s6274_g17029.t3 |
| Definition | - |
>habu1_s6274_g17029.t3 MYLKXVKRIEKNSARIESLIQKLKSLRLTLLAKEDSIPVKKVNPAKKIPGLNVKDSLDIDVLSNHLAHLQKRLKELKEDM FTKYIPIENTANVEEDMNYAVQKRNMAEKKNESLKFCFYRLNLFASVISIWESTDKNIDTLQQLIYQMIENEKLIKGSIA SSISSVFERDPSKSKEAEDLIEYIERFNELFSRGQYEAAATYAANCPRGILRNEETLEKFRAVGHVKGKILPLLLYCDAL ITTTIAVKKHLPANLTTEAIKCALAEKRLDLVMHWVTLHKLEFSEAAGDAIYKYADVDIHNMSQCLALAQIAYSECGAHK KAVLCLCRQGQIYGAMDYLHHFQLLSTEDYVFLLKHCPRIDFIRCLTQEWNGKQPIMSLGETILSLIGTEHQIHGIRLLE DITKKGKDTLEQMIVNDTCNIEGWKEIAETCLSVKKENLYKLIISVLASLEGVFEIPADDTEDAKLMEHVFL |
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