Gene
| Gene Model ID | habu1_s643_g02960 |
|---|---|
| Locus | habu1_scaffold643 : 279336 ... 294375 : - |
| To GenomeBrowser | habu1_scaffold643:279336..294375 |
| Genes list of scaffold | habu1_scaffold643 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| thioredoxin reductase 3 | EC:1.16.1.1 EC:1.8.1.9 GO:0004791 GO:0006118 GO:0006206 GO:0009055 GO:0015035 GO:0016152 GO:0045340 GO:0045454 GO:0050660 GO:0050661 GO:0050787 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s643_g02960.t1 | 1 | 1 | Pyr_redox_2 | 80 | 387 | 1.5e-29 | 103.3 | 6.0e-33 | 2.2e-29 | 102.7 |
| habu1_s643_g02960.t1 | 1 | 1 | Pyr_redox_3 | 198 | 270 | 2.0e-07 | 31.2 | 9.3e-11 | 3.5e-07 | 30.5 |
| habu1_s643_g02960.t1 | 1 | 1 | Pyr_redox | 240 | 310 | 1.3e-12 | 47.9 | 8.1e-16 | 3.0e-12 | 46.7 |
| habu1_s643_g02960.t1 | 1 | 1 | Pyr_redox_dim | 418 | 530 | 8.5e-30 | 103.0 | 1.5e-32 | 5.5e-29 | 100.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s643_g02960.t1 | gi|602636795|ref|XP_007425249.1| | PREDICTED: thioredoxin reductase 3-like isoform X2 [Python bivittatus] | 0.0 |
| habu1_s643_g02960.t1 | gi|602636793|ref|XP_007425248.1| | PREDICTED: thioredoxin reductase 3-like isoform X1 [Python bivittatus] | 0.0 |
| habu1_s643_g02960.t1 | gi|327265970|ref|XP_003217780.1| | PREDICTED: thioredoxin reductase 3 [Anolis carolinensis] | 0.0 |
| habu1_s643_g02960.t1 | gi|530589575|ref|XP_005288472.1| | PREDICTED: thioredoxin reductase 3 [Chrysemys picta bellii] | 0.0 |
| habu1_s643_g02960.t1 | gi|591370407|ref|XP_007060028.1| | PREDICTED: thioredoxin reductase 3-like isoform X1 [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 10.9 |
| Venom grand-1 | 5.5 |
| Pit, infrared sensing | 10.6 |
| Nose | 18.0 |
| Brain-1 | 13.7 |
| Eye | 9.3 |
| fetal fibroblast | 66.2 |
| venom gland-2 | 12.1 |
| Brain-2 | 14.9 |
| Spleen | 7.3 |
| Lung | 7.5 |
| Liver | 5.2 |
| Kidney | 4.9 |
| Pancreas | 3.2 |
| Small intestine | 6.7 |
| Large intestine | 6.3 |
| Stomach | 6.6 |
| heart | 36.9 |
| ovary | 28.0 |
| cheek muscle | 15.5 |
Transcript
| Transcript ID | habu1_s643_g02960.t1 |
|---|---|
| Definition | - |
>habu1_s643_g02960.t1 atacgggtattctattttattcctttatataagctgaggacgcgatgggggcagcggccgggagccgctgcctcccgtcc tgctccccctccctggacgcgatgggggcggcggccgggagctgttgcctcccgtcctgctccccctccccgcccattca gctgaggacacgatggggcggtggccgggagccgctgcctcccgtcctgctccccctccccgcccattcggctggggacg cggcggccaggctgggggcggtgtggactcccgacgatgctgcagtggccgctgccgtgccgccgctgccgccactggag ccgctgcctcccgaagctgccaccttggggaagaaggtcatggtcttagactatgttgtgccaacaccattgggtactac atgggggcttggtggtacttgtgtaaacgttggttgcattcccaaaaagttgatgcatcaagcagctttattaggtcagg cacttgaagattcaagaaagtttggatgggagtatgatcagcaagttaaacacaattgggaaaccatgattgaaggaatt caaaattacatagggtctttgaattggggatatcgggtggctttacgtgagaagactgtgacatacctcaatgcatatgg agaatttattggatcacataagatcaaggcaatcaacagaaaaggacaagaaactttctacacagcagagacatttgttc ttgctactggagaaaggccgcgatatttgggcatccccggagataaagaatattgtatcacgagtgatgacctcttctcc ctcccctattgccctggaaggaccctagttgtgggagcctcttatgtagctttggaatgtgcaggatttcttgctagcct tggtttggatgttaccgttatggtacgctcaatccttcttcgtggctttgatcaagaaatggcagacaaagcaggtgttt acatggaaacacatggagtaaagttcatcagaaagtttgttcctattgaggttataaagctggaggatggtatgcctgga aaactcaaagtaatcgcaaaatccactgaaggatcacaagtgattgaaggagaatataacactgttttgatagctgttgg ccgtgatgcttgcaccaggaccattggcttggataaaattggtgtgaaaatgaatgaaaataatgggaaaatacctgtga atgatgaagaacaaaccaatgtaccttatgtctatgcaattggggacattttggaaggaaagctggaacttacaccagtt gccatacaggcaggcaagctattagctcgcagactttttggaggaagttctgcaaagtgtgattatgtcaatgtgccaac tacagtgtttacacctttggaatatggttgttgtggcttaccagaagaaaaagctattgaactatttggtgaagaaaata tagaggtatatcacacttacttctggccacttgaatgggcaataccaaatagagacaacaatacctgttatgcaaaaata atctgcaataagcttaacaataaccgtgtaataggattacatgtacttggaccgaatgctggggaaataacccaaggttt tggggcagcaatgaaatgtggtatcacaaaagaattacttgatgaaacaattggtatacatccaactagtgcagaggtat tcactacaatgggaattaccaaatcttcaggaaaagatatcactcagagtggttgctgaggttaaaccctgctgtttaaa ctattttctgatgggccactaacctattggaagtttcataatgcataccaaatacacgggtaaatacgtaatatgtaatt gtagtattttaatactagaggtgatgcatttttgaacttctataaaagatggtggtctttgccagaaatagtaaaacagc agggtgaacattaatcctgacatgattagaatggcacgcaagtgcatttttgaagttatggctctgaatctcatctggag gcgagtcatgactgatgatttctatgcaagttgggaaaacctattcgtccagtcaaacaagtagaaaaatttcttccaga gaaacttctgaattgcacaggtggaattttttagtttcagtggttttgtatgaacactcaggcacagttgaatgtatggt tgataaattttgctagcatgctctgttaacttcgttgagatactagtgcattttgttaattgttaatatgaatgctgagg tttgtttgcattttttataaatattccagttcatttattagaatctgttgaagcattgcattcccctgggcattaaagtt ccaatgacatgaaatgtga |
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Protein
| Protein ID | habu1_s643_g02960.t1 |
|---|---|
| Definition | - |
>habu1_s643_g02960.t1 MGAAAGSCCLPSCSPSPPIQLRTRWGGGREPLPPVLLPLPAHSAGDAAARLGAVWTPDDAAVAAAVPPLPPLEPLPPEAA TLGKKVMVLDYVVPTPLGTTWGLGGTCVNVGCIPKKLMHQAALLGQALEDSRKFGWEYDQQVKHNWETMIEGIQNYIGSL NWGYRVALREKTVTYLNAYGEFIGSHKIKAINRKGQETFYTAETFVLATGERPRYLGIPGDKEYCITSDDLFSLPYCPGR TLVVGASYVALECAGFLASLGLDVTVMVRSILLRGFDQEMADKAGVYMETHGVKFIRKFVPIEVIKLEDGMPGKLKVIAK STEGSQVIEGEYNTVLIAVGRDACTRTIGLDKIGVKMNENNGKIPVNDEEQTNVPYVYAIGDILEGKLELTPVAIQAGKL LARRLFGGSSAKCDYVNVPTTVFTPLEYGCCGLPEEKAIELFGEENIEVYHTYFWPLEWAIPNRDNNTCYAKIICNKLNN NRVIGLHVLGPNAGEITQGFGAAMKCGITKELLDETIGIHPTSAEVFTTMGITKSSGKDITQSGC |
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