Gene
| Gene Model ID | habu1_s643_g02963 |
|---|---|
| Locus | habu1_scaffold643 : 353821 ... 374715 : - |
| To GenomeBrowser | habu1_scaffold643:353821..374715 |
| Genes list of scaffold | habu1_scaffold643 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tubulin beta-7 partial | GO:0003924 GO:0005200 GO:0005525 GO:0005641 GO:0005874 GO:0007165 GO:0008152 GO:0019904 GO:0031625 GO:0032403 GO:0032794 GO:0036464 GO:0042288 GO:0042612 GO:0044297 GO:0045298 GO:0051225 GO:0051258 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s643_g02963.t1 | 1 | 1 | Tubulin | 10 | 214 | 0.0 | 206.5 | 0.0 | 0.0 | 205.8 |
| habu1_s643_g02963.t1 | 1 | 1 | Tubulin_C | 253 | 374 | 0.0 | 167.6 | 0.0 | 0.0 | 166.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s643_g02963.t1 | gi|148691289|gb|EDL23236.1| | tubulin, beta 5, partial [Mus musculus] | 0.0 |
| habu1_s643_g02963.t1 | gi|637350894|ref|XP_003227065.2| | PREDICTED: tubulin beta chain [Anolis carolinensis] | 0.0 |
| habu1_s643_g02963.t1 | gi|7106439|ref|NP_035785.1| | tubulin beta-5 chain [Mus musculus] | 0.0 |
| habu1_s643_g02963.t1 | gi|291395962|ref|XP_002714405.1| | PREDICTED: tubulin beta chain [Oryctolagus cuniculus] | 0.0 |
| habu1_s643_g02963.t1 | gi|12846758|dbj|BAB27292.1| | unnamed protein product [Mus musculus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 87.0 |
| Venom grand-1 | 31.8 |
| Pit, infrared sensing | 76.2 |
| Nose | 43.3 |
| Brain-1 | 53.4 |
| Eye | 66.9 |
| fetal fibroblast | 953.2 |
| venom gland-2 | 122.9 |
| Brain-2 | 101.0 |
| Spleen | 36.9 |
| Lung | 27.4 |
| Liver | 45.0 |
| Kidney | 41.7 |
| Pancreas | 48.1 |
| Small intestine | 24.3 |
| Large intestine | 32.8 |
| Stomach | 37.5 |
| heart | 27.4 |
| ovary | 239.7 |
| cheek muscle | 67.7 |
Transcript
| Transcript ID | habu1_s643_g02963.t1 |
|---|---|
| Definition | - |
>habu1_s643_g02963.t1 ctccgagccgacttcgttccctgggatcgtctcctccttccannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgagacaaatgagaggatccaaggggctttcccgcaacacagagg cgcggctctcttgagtcttaattgaaccggtttcctaatgaagcgcgactggggttgttgcaggcgtgtaagcagaccct gggtaggcttactcgggactgccccaccctgattacctctacatgacctacgttgcggtatacgcatccacttcgttctg ggaagtgatcagtgatgaacatggaattgacccaactggaacctaccatggtgacagtgatctacaactggatcgcatca gtgtttactacaatgaggccactggtggcaaatatgtccctcgtgccatcttggttgatttggagccaggaaccatggac tcagtgcgttctggaccttttggacagatatttcgaccagataattttgtatttggccagagtggagctggtaacaactg ggccaaaggtcattatacagaaggtgccgagttggtggattcagtcctagatgttgtgaggaaggaagccgagagttgtg actgcctgcaaggattccagctgacccactctctagggggtggaaccggttctgggatgggcaccttactgatcagcaag atccgtgaagagtaccctgaccgtatcatgaataccttcagcgtggtgccctctcccaaggtctcagataccgtggtgga gccttacaatgctaccctctcagtccaccagctggtggagaacacagatgagacctactgcatcgacaacgaagctctct atgacatctgcttccgtaccctcaagctgaccactccaacctacggggatcttaaccacctggtctctgccaccatgagt ggtgtgacgacttgcctccgctttccaggacagctgaacgccgatctccgcaagcttgctgtaaacatggttccattccc ccggctccactttttcatgcccggatttgctcccttgaccagccgtggcagccaacagtaccgggccttaacagtcccag agttaacgcagcaagttttcgatgccaagaacatgatggcagcctgcgatccccgccatggacgctacctaactgtggca gccgtcttccgaggccgtatgtccatgaaggaggtggacgaacagatgttgaacgtgcagaacaagaacagcagctactt cgtcgaatggatccccaacaacgtcaagacggccgtgtgcgacatccctccccgtggcctgaagatggcggtcaccttca ttggcaacagcacagccatccaggagctcttcaagcgcatctccgagcagttcaccgccatgttccgccgtaaagctttc ctacactggtacacaggtgagggcatggacgagatggagttcacagaagccgagagcaacatgaatgacctcgtctctga atatcaacaataccaggatgccacggctgaggaagaggaggattttggagaagaggcagaggaagaagcttgaggttaaa cctcgcgccctttcgacacctgttcaataagtccgcacaaaataaaaataaaaaaaattgcatctcca |
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Protein
| Protein ID | habu1_s643_g02963.t1 |
|---|---|
| Definition | - |
>habu1_s643_g02963.t1 MTYVAVYASTSFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPD NFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFS VVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNA DLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDE QMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF TEAESNMNDLVSEYQQYQDATAEEEEDFGEEAEEEA |
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