Gene
| Gene Model ID | habu1_s643_g02964 |
|---|---|
| Locus | habu1_scaffold643 : 392876 ... 420264 : + |
| To GenomeBrowser | habu1_scaffold643:392876..420264 |
| Genes list of scaffold | habu1_scaffold643 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s643_g02964.t1 | 1 | 1 | FHA | 53 | 120 | 3.3e-09 | 36.7 | 1.2e-12 | 5.8e-09 | 35.9 |
| habu1_s643_g02964.t1 | 1 | 1 | BRCT | 1222 | 1275 | 3.9e-10 | 39.7 | 6.9e-10 | 3.4e-06 | 27.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s643_g02964.t1 | gi|602674054|ref|XP_007442521.1| | PREDICTED: mediator of DNA damage checkpoint protein 1-like [Python bivittatus] | 0.0 |
| habu1_s643_g02964.t1 | gi|637350889|ref|XP_008118319.1| | PREDICTED: mediator of DNA damage checkpoint protein 1 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s643_g02964.t1 | gi|637350885|ref|XP_008118318.1| | PREDICTED: mediator of DNA damage checkpoint protein 1 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s643_g02964.t1 | gi|641783376|ref|XP_008174081.1| | PREDICTED: mediator of DNA damage checkpoint protein 1-like [Chrysemys picta bellii] | 0.0 |
| habu1_s643_g02964.t1 | gi|557332734|ref|XP_006039153.1| | PREDICTED: mediator of DNA damage checkpoint protein 1-like isoform X2 [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.0 |
| Venom grand-1 | 7.1 |
| Pit, infrared sensing | 5.7 |
| Nose | 4.7 |
| Brain-1 | 3.7 |
| Eye | 6.3 |
| fetal fibroblast | 6.4 |
| venom gland-2 | 5.0 |
| Brain-2 | 3.1 |
| Spleen | 7.6 |
| Lung | 8.0 |
| Liver | 9.7 |
| Kidney | 5.1 |
| Pancreas | 10.5 |
| Small intestine | 5.4 |
| Large intestine | 7.9 |
| Stomach | 5.9 |
| heart | 5.0 |
| ovary | 9.0 |
| cheek muscle | 3.9 |
Transcript
| Transcript ID | habu1_s643_g02964.t1 |
|---|---|
| Definition | - |
>habu1_s643_g02964.t1 cttcgcttttagggttgctcggaggatggaacaaactcagttactggagtgggatggagaaggcgattctacggatgggt ctgatgctgcaggggagtcccctaaaccggtggggcgcttgcacctgctgagcagcaagtacggccctgagaaagatttc tggatctaccctggcgagaacaccattggtcgcttggaaagctgtcacgtctgcttgcctaccaattctgtttccaaagc gcatgcggtgatcgaggtcccctcctcccgcgggccccaccttttgtacgatcggggcagcttgaaccggactcgccgcc agcgggtggccttgatcccacaggtccgctacagcctccaagatggggacaccttggtttttggagatgtggcatgccag tacttcatcctggtcccggataccgattgtgactccctggaggaatccatggcagtgccacccacccaggaaagggtgga ggccagtgcactggtcattgaggaaacacctgcgccgggcaggagaataggctttgggcaagttctggtccaggattctg acaaggaagaggaaggggaggaagtgatcaatgggacaggaagcaacctgcaccagacagcaagagacgagtctggttgc tctaacaaaaatggcgtaggagaaggacaagcgagtttggcttcctttggtgtctcttctccctcgtctacagtggtgcc tgaaagtgatgatgaaagtggagacctttcagccagtggcccaccctgccctgctctgcgtctttcctttgagagccagg atgctgaacggggccccacaaagaatggtgatggtcattcttccagcagaaaagactccgaagaacccacagctgaagag gagggagcttctacagaacatggcccggtagaaggctttcatttggacagtgacacagatgtagaggacgaaaaccaaat gggttgcatctccgaagcatcagcatcattggacccatcaaaaagggatagggacctagaggtggaccctgagcctgatc tgaatgagtcttcagtgatggctccagggatccattgtccccaaacatcagttgagctgggcagtgatacagatgcggaa gagaccgtagaaagcccagctgccttcagattaaagctcccctccacttctttggaaaaagaagatgacaccgacgtgga agcagaagtgaaaagtccaagtgttgttggtccagggaaacatgagcctgtttccccaaaagaggatgactgccaacagc tggaaggcaatgaagaccatgtccaacttggtggggaaaaggatgatacagatgtggaggagactttggataatccggaa agcggtgtgaatgccctgcctcccacagcccatgaagatgttgacacacatgtggaaggctcctctgtcaagggggaggc tccaggcaggaccaaaaaccacgaagttggtggagacggtggtggggatgataccgaggaggaagtgattaaaccgcggc tggagaattcagaagatacttgtcctcagaggacctgttcttcaagtggcaaggagaacagcccggatagggaagagatc cccctcaagaggattgtgccagatgatcatcgcgttggtgagggactcggcgacgtggttggattgacacaaaattctaa cgtcgaacttgagatgagttacgaagtcggtgacacgtctcctagggacttcgataagaaggagcccctgccaaaccccg agcatcacaacctgcccctactctttctgggtagcgatacagatggggaagaggaagcaggtcatccggatgcagaatca aaggagaacccgcaagcctccggtgtggagtccagcaaaggaagtagagcaagccatttgggggatccagatatcggatc tcaggaaaaacctacatctgtacaagacaaggacagtgataccgatgtggaagtgatgcctgtgggtcatgataaatcca cagctcaagacagtgatacggatacggaggacgttgctgcacctttactaaggaaacccctagaagagaaaggcgcgcag tcgataatcccagtgagatctgaggtaggagaagagcagttgacttcttctgcagtaggggttggagtgtccctcaaatc tcgtgaagacaatgaagatacagacgcagaaagagaggaatcctattcagcagacgagagcaacaccgatgacgaggttg atgtgtccctgcaggccacacagtgttacctgccaactgaaaccacatcacctagacctgaaaaagctggaggtatcaca gctacagtatcagattccgattgcgctctagaagaggagcccactcaggcatttgacttcagtttaccctttttacccgc caaatgtcaactcaggaatgtaatcagcttacctttgaaagacaacagttctgaccaagaagatgatatgctggaagcta cccagccatattgtcaggagcccgaacccgaagtcttagcagagctttgcgaggccttggctggcaaaaagaagctggac ccagaacagcttgtccagaaccaacccgaaggggagaaatgttttgagccggtgcctcaacctgatttcctggcttcaac ctctccgggagaagagaccacccccagtcttccgggagacaaccctctgcctcaggctatggagttgccccctccgcagt cctccttgcagaccacagggggcgcctctgaagaggaaacccagcctctctgctctctgcaaattccccttgtggccagc cagcggtccttgactccacaggaagagaagagggtggaggtcccagaaggtggaagcccttcagaggtgatgctcagaca gagtgaggcaactcctctggatgaccaagtggaagaaaactcggaattagtaagagaaacaaggaatcctaagaagatgc cagcccaggaggatccggcgtcaacagcgccccctgcccgtgagctgcggcgcagtctgcgatcttcaactacttctgct tcacccgcccctgtcccagaaagacgaagcctccgccaacagggatctggggccgtcgtcgcatccagcaaaccagctgc cccagagagcaggcgtagggggctgcggcagctcagcaaagcaagtcaacgaaagagggaagtgaaggagaggccagaac agcccggagaagaggggcccaggaagaaggccaggaatggaaacctgaccgctgctcctgtccctcaaactcgaacgagg agctcccagagggaatccagggctgccagcaaggttacagaagtagcagccgccgtctctgttagccctggggccaggga gcccacaaaacgggccaggaggggtcttgctcccggccctgggctagaagggcagccggagcgtccaaggactcgggcca gcaagctgtccggcagcagcagcatttccacaagcaccccaagcccaaaggattctgggaaaagtgccaagactgggcag gaaccaatactgtccactccgtcttcgggaaggaagttgcggcatcacagcccggaagacagagcgacaagtgaaaaggc ctcatctggcagtcgcacccggcgctccactggacctggcagccccgcccccaaggtatggcgggtgctgttcacgggtg tgattgatgaggagggagagcgtgtagtggccgaattggggggttctctagcagaatctgtctttgattgcactcacctt gtgacggaccgcgtgcgtcgcacggtcaagttcttgtgtgccctggctcgaggaatccccattgtgaccctcgactggct ggagaagagcagacggaatgcttttttcctggcaccaaacagcttccttgttcgggaccctgagcaggagaagaacttgg ggttcagcctctccacctcgctgcagaaagcacagcagaaaggagccctgttccagggctacgaaatccacgtcactcct aacgtgaagccagaaccagagtacatgaaggacatcgttaaatgcagtggtgggactttattaccaagaatgcctcgggc ctttaaggagaaacgtatcgtggtgtcctgccttgaggacttgctgcgctgcaaaccagctcaggaggcaggagtgccca tcaccaacgcggaattcatcctgacgggtattctgcagcagacggtggacttgcaggctcacagcctggatgtctgtgtg ggtctgtctccagcttccagcccccttgttccttctaccaggaccggcaagaggcgggcagccacacggacggccccagc tccacccagcacagccaagagacgacgctgatcccccccaagggcagcactgccttaaaattgtacatacgggattttgt tttttatatactgctgccaataaacggggtgtgaaaagactgatgg |
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Protein
| Protein ID | habu1_s643_g02964.t1 |
|---|---|
| Definition | - |
>habu1_s643_g02964.t1 MEQTQLLEWDGEGDSTDGSDAAGESPKPVGRLHLLSSKYGPEKDFWIYPGENTIGRLESCHVCLPTNSVSKAHAVIEVPS SRGPHLLYDRGSLNRTRRQRVALIPQVRYSLQDGDTLVFGDVACQYFILVPDTDCDSLEESMAVPPTQERVEASALVIEE TPAPGRRIGFGQVLVQDSDKEEEGEEVINGTGSNLHQTARDESGCSNKNGVGEGQASLASFGVSSPSSTVVPESDDESGD LSASGPPCPALRLSFESQDAERGPTKNGDGHSSSRKDSEEPTAEEEGASTEHGPVEGFHLDSDTDVEDENQMGCISEASA SLDPSKRDRDLEVDPEPDLNESSVMAPGIHCPQTSVELGSDTDAEETVESPAAFRLKLPSTSLEKEDDTDVEAEVKSPSV VGPGKHEPVSPKEDDCQQLEGNEDHVQLGGEKDDTDVEETLDNPESGVNALPPTAHEDVDTHVEGSSVKGEAPGRTKNHE VGGDGGGDDTEEEVIKPRLENSEDTCPQRTCSSSGKENSPDREEIPLKRIVPDDHRVGEGLGDVVGLTQNSNVELEMSYE VGDTSPRDFDKKEPLPNPEHHNLPLLFLGSDTDGEEEAGHPDAESKENPQASGVESSKGSRASHLGDPDIGSQEKPTSVQ DKDSDTDVEVMPVGHDKSTAQDSDTDTEDVAAPLLRKPLEEKGAQSIIPVRSEVGEEQLTSSAVGVGVSLKSREDNEDTD AEREESYSADESNTDDEVDVSLQATQCYLPTETTSPRPEKAGGITATVSDSDCALEEEPTQAFDFSLPFLPAKCQLRNVI SLPLKDNSSDQEDDMLEATQPYCQEPEPEVLAELCEALAGKKKLDPEQLVQNQPEGEKCFEPVPQPDFLASTSPGEETTP SLPGDNPLPQAMELPPPQSSLQTTGGASEEETQPLCSLQIPLVASQRSLTPQEEKRVEVPEGGSPSEVMLRQSEATPLDD QVEENSELVRETRNPKKMPAQEDPASTAPPARELRRSLRSSTTSASPAPVPERRSLRQQGSGAVVASSKPAAPESRRRGL RQLSKASQRKREVKERPEQPGEEGPRKKARNGNLTAAPVPQTRTRSSQRESRAASKVTEVAAAVSVSPGAREPTKRARRG LAPGPGLEGQPERPRTRASKLSGSSSISTSTPSPKDSGKSAKTGQEPILSTPSSGRKLRHHSPEDRATSEKASSGSRTRR STGPGSPAPKVWRVLFTGVIDEEGERVVAELGGSLAESVFDCTHLVTDRVRRTVKFLCALARGIPIVTLDWLEKSRRNAF FLAPNSFLVRDPEQEKNLGFSLSTSLQKAQQKGALFQGYEIHVTPNVKPEPEYMKDIVKCSGGTLLPRMPRAFKEKRIVV SCLEDLLRCKPAQEAGVPITNAEFILTGILQQTVDLQAHSLDVCVGLSPASSPLVPSTRTGKRRAATRTAPAPPSTAKRR R |
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