Gene
| Gene Model ID | habu1_s643_g02967 |
|---|---|
| Locus | habu1_scaffold643 : 618510 ... 632302 : + |
| To GenomeBrowser | habu1_scaffold643:618510..632302 |
| Genes list of scaffold | habu1_scaffold643 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nuclear factor ovary-like | GO:0005622 GO:0008270 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s643_g02967.t1 | 1 | 1 | zf-B_box | 64 | 99 | 9.3e-08 | 31.8 | 8.8e-11 | 9.3e-08 | 31.8 |
| habu1_s643_g02967.t1 | 1 | 1 | SPRY | 460 | 567 | 3.7e-20 | 72.2 | 7.6e-23 | 8.0e-20 | 71.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s643_g02967.t1 | gi|637350870|ref|XP_008118314.1| | PREDICTED: nuclear factor 7, ovary-like [Anolis carolinensis] | 0.0 |
| habu1_s643_g02967.t1 | gi|602660452|ref|XP_007435891.1| | PREDICTED: zinc-binding protein A33-like [Python bivittatus] | 0.0 |
| habu1_s643_g02967.t1 | gi|641783380|ref|XP_008174083.1| | PREDICTED: zinc-binding protein A33-like [Chrysemys picta bellii] | 0.0 |
| habu1_s643_g02967.t1 | gi|557331753|ref|XP_006038714.1| | PREDICTED: zinc-binding protein A33-like [Alligator sinensis] | 0.0 |
| habu1_s643_g02967.t1 | gi|558158593|ref|XP_006122315.1| | PREDICTED: tripartite motif-containing protein 26-like [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.3 |
| Venom grand-1 | 0.8 |
| Pit, infrared sensing | 0.9 |
| Nose | 0.7 |
| Brain-1 | 0.3 |
| Eye | 0.6 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.2 |
| Brain-2 | 0.3 |
| Spleen | 6.9 |
| Lung | 2.3 |
| Liver | 0.7 |
| Kidney | 0.2 |
| Pancreas | 0.2 |
| Small intestine | 0.7 |
| Large intestine | 1.3 |
| Stomach | 0.4 |
| heart | 0.7 |
| ovary | 0.0 |
| cheek muscle | 0.3 |
Transcript
| Transcript ID | habu1_s643_g02967.t1 |
|---|---|
| Definition | - |
>habu1_s643_g02967.t1 cagctgcatatctttctgtacatggactggctgttacttcctgcctgaatttaactggtcacagggggtgggtgatggga gatggagccaaggatggtttttatttagaggtttaattgccagcaggtctgatgcattgtggggtttccccaccctgcaa ctgggctgtgagaatcaccttgaggaagaggaggaagagacgcagccaaggcagcggtgaggccgaaatagaggcagttt tatctgggaaacctgttcaggctgtctttgaattgaccaataatggcttcagtacaaaaagtgtccagtttcactgaaga cttgctgtgccccatttgcctctccctctttcgggacccccgcatgctgacgtgcggccacagcttctgcgctccctgcc tggagccctgcatccccagggggctttgccccgagtgccggcaccccttcgctttgcgcgacatgaccatcaaccgagcc ctctgcagcttgtccgagaaggcccggctcctgaggctggatgaagggtacagcaccggcagctggtacttctgtgagga acacaaggagcccctcaagctcttctgcagccaagatgaggagcccgtctgcgtcatttgccgggacttgcctgagcacc ggggacacgacttcctgcccaccaaaaacgcggttcaaacctatcaggaccagctgaaagcatttctggagcctcttgag gaagatctcagacggttgaaaaggagtcagtgtcaccagcaggagaacattatcgaattaaagacgtgttccgaatcttt gtctgatcatgtttctggagagtttgtgaagatgcaccagctgctgaacgacagggagctgggtataaagcaggccttag aataccagcgaaaaaagaacttggctcagatggaaaccaagttaaaggaactggactggaagatggcctcatgttcagaa actctgtgttgcatacaggccggccttgagtgcaaagatcacataagtttccttaaggaggcaaaagagttgctagagag gttaaataaggaacaacctgatgaacctgaactaggtgccaaactagtaagagaagatgggttgggggccagcagtgacg acacagatgaatttgtcaatgagattgattggttgataagagatgctgaagatagtgatgaggaagaagacggggaacta aaaaagtttgtcccttttgggatgcccttccccagggtaagtaaggaacaacctgatgaacctgaactaggtgccaaact agtaggagaagatgggttgggggccagcaatgacgacaccagcaatgacgacacagatgaatttgtgaatgaggttgatc ggttgatgagagatgctgaaggtgatgatgaggaagaggaggaggaggaagaagaagaagaggatgaacaagaggaagaa ccagagactgcagcaggagaagaggagaaggaagaggaagaagatggagtggtggctgtagacttgaacgtgggcgagtt taaaggacctctgcaattctgcgcctggaagcagctcctgggtgcggtccatccagtccctgcaagcttaactttggact acaacttagcttgtcccagcctggtccaattgaaagaagccaccggagtcacgttcagtcccaaccaatgcttcagccga caaaagtcagagcacttcacctcaagcctttgtgtggtgggatggaaaggaattaccactgggcgcttctactgggagat tgaagtcggggacagtaccggttgggtggtggggatggccaaaaagtctgtgaagcacaagaagtggctgaacgttctac ccaaggaaggcgtgtgggccattgagctgaaggctggagagtaccaagctctgagtgaaccccgtacgcccctctcggtc tgcgggaggatggaaaaagttggggtctacctggactttgaaggggggcatctctatttttacaatggcaacagcatgac ccacctttacaccttccaagaatgcttccatgaagagctgctcccctttctcagcacccaaagcagctaccccctctcgg tgtggaatctggtgctttgagatcatagttcagaatgccgcattgcaatgaacagcctggtgaaaattgaaaccattgag atgtgctagaatggatcttttcttagcagtagcaatagcatgtagacttatataccacgccataatgctttacagtactc tccgggcagtttacaatatcagcatattgcccccaacaatctgggtcttcattttatggacctggaaggatggaagaccg agtcaaccttgagcccaacccatcaggattgaactccaggctgtggacagagtttgcctgcaatactgcattctaaccac tgagccaccagggctccttcaagagacaatccaatctattcagcctttgcaaacagtcgttgaaagattcgaaacgggtc tgacctgactattgtggtccatgatgattgctctaggcgcagagagttctataagtccagctttcaacttgaccttctat ttgtgcttacttttcttgacccattgacagtagtgaggaaagaggttgcctctgtccacctgtggtgtaagattttacct gctttcaatgaattccactgcaggtaaaaacaatgagagcaagccgtacttcctatccttggttgggaaggtcttagtag ggatattcaaatattcaaatactgggttgtgtttatatctcaataagttttggtttacctcatcatcctttaatacccat caccctataatgctgtagtagggcattgcatgcccaaacaactaggcacaaggactgttgtttcccccatgccatccctc tgctaaacaactaattcccacaatgctgttttattcccctgggatgtcaaaccacctggtagggctgtattactattatc cttctcagctttcctattatctattcctttaacatcttatgactataactttgttgtttgcatcttatgatttatcttga ttgcttttatgtagtatcctattatgatttatgttgattgcttatttagtatcatgacaatcactgagtgttgtatatta tgatttatgatgattgcattttatgattatgatcatgatttatcacttgttgcttgtatgtacactgagagtttatgcac cagagacaacttccttatgtgtccaatcacacttgaccaataaagaattctattccgttccattcc |
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Protein
| Protein ID | habu1_s643_g02967.t1 |
|---|---|
| Definition | - |
>habu1_s643_g02967.t1 MLTCGHSFCAPCLEPCIPRGLCPECRHPFALRDMTINRALCSLSEKARLLRLDEGYSTGSWYFCEEHKEPLKLFCSQDEE PVCVICRDLPEHRGHDFLPTKNAVQTYQDQLKAFLEPLEEDLRRLKRSQCHQQENIIELKTCSESLSDHVSGEFVKMHQL LNDRELGIKQALEYQRKKNLAQMETKLKELDWKMASCSETLCCIQAGLECKDHISFLKEAKELLERLNKEQPDEPELGAK LVREDGLGASSDDTDEFVNEIDWLIRDAEDSDEEEDGELKKFVPFGMPFPRVSKEQPDEPELGAKLVGEDGLGASNDDTS NDDTDEFVNEVDRLMRDAEGDDEEEEEEEEEEEDEQEEEPETAAGEEEKEEEEDGVVAVDLNVGEFKGPLQFCAWKQLLG AVHPVPASLTLDYNLACPSLVQLKEATGVTFSPNQCFSRQKSEHFTSSLCVVGWKGITTGRFYWEIEVGDSTGWVVGMAK KSVKHKKWLNVLPKEGVWAIELKAGEYQALSEPRTPLSVCGRMEKVGVYLDFEGGHLYFYNGNSMTHLYTFQECFHEELL PFLSTQSSYPLSVWNLVL |
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