Gene
| Gene Model ID | habu1_s6645_g17281 |
|---|---|
| Locus | habu1_scaffold6645 : 30566 ... 39575 : - |
| To GenomeBrowser | habu1_scaffold6645:30566..39575 |
| Genes list of scaffold | habu1_scaffold6645 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| methionine adenosyltransferase 2 subunit beta | GO:0005634 GO:0005739 GO:0006556 GO:0016740 GO:0019899 GO:0048269 GO:0048270 GO:0050790 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s6645_g17281.t1 | 1 | 1 | RmlD_sub_bind | 30 | 322 | 0.0 | 260.1 | 0.0 | 0.0 | 259.8 |
| habu1_s6645_g17281.t1 | 1 | 1 | Epimerase | 31 | 208 | 7.5e-23 | 81.1 | 5.2e-26 | 9.7e-23 | 80.8 |
| habu1_s6645_g17281.t1 | 1 | 1 | NAD_binding_10 | 31 | 236 | 8.0e-06 | 25.9 | 6.7e-09 | 1.2e-05 | 25.3 |
| habu1_s6645_g17281.t1 | 1 | 1 | 3Beta_HSD | 67 | 268 | 1.0e-05 | 24.4 | 2.4e-08 | 4.4e-05 | 22.3 |
| habu1_s6645_g17281.t1 | 1 | 1 | Polysacc_synt_2 | 72 | 144 | 3.4e-09 | 36.0 | 5.7e-10 | 1.1e-06 | 27.8 |
| habu1_s6645_g17281.t1 | 1 | 1 | NAD_binding_4 | 87 | 190 | 2.2e-07 | 30.0 | 2.4e-08 | 4.4e-05 | 22.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s6645_g17281.t1 | gi|602659877|ref|XP_007435624.1| | PREDICTED: methionine adenosyltransferase 2 subunit beta [Python bivittatus] | 0.0 |
| habu1_s6645_g17281.t1 | gi|327260693|ref|XP_003215168.1| | PREDICTED: methionine adenosyltransferase 2 subunit beta [Anolis carolinensis] | 0.0 |
| habu1_s6645_g17281.t1 | gi|557260233|ref|XP_006015764.1| | PREDICTED: methionine adenosyltransferase 2 subunit beta [Alligator sinensis] | 0.0 |
| habu1_s6645_g17281.t1 | gi|564239560|ref|XP_006276629.1| | PREDICTED: methionine adenosyltransferase 2 subunit beta [Alligator mississippiensis] | 0.0 |
| habu1_s6645_g17281.t1 | gi|530616571|ref|XP_005298034.1| | PREDICTED: methionine adenosyltransferase 2 subunit beta [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 30.3 |
| Venom grand-1 | 16.6 |
| Pit, infrared sensing | 22.5 |
| Nose | 28.7 |
| Brain-1 | 22.9 |
| Eye | 19.5 |
| fetal fibroblast | 47.5 |
| venom gland-2 | 12.2 |
| Brain-2 | 19.8 |
| Spleen | 24.2 |
| Lung | 25.7 |
| Liver | 37.2 |
| Kidney | 25.5 |
| Pancreas | 13.7 |
| Small intestine | 29.4 |
| Large intestine | 47.6 |
| Stomach | 38.6 |
| heart | 33.4 |
| ovary | 72.4 |
| cheek muscle | 24.2 |
Transcript
| Transcript ID | habu1_s6645_g17281.t1 |
|---|---|
| Definition | - |
>habu1_s6645_g17281.t1 ctgatccccgcctcccacggaagaaaggaccaatcagcggcgcggctggaggaaaggggcgggactttgggcgcgacggc cgcctccacagtccagctgaacgcgggcggcggcggcggcgcctacggaccaaggcaggagggatggtcgggtgggagaa agggctccgcatccattttgagccggggagctgttggctcgaggaggaagatgttgatatcccaaatagacgtgtcctaa ttactggtgccactggactgcttggcagagctgtttataaagaatttaaagcaaatcactggcacactcttggctgtggc tacagtagagctcgacctttgtttgaacaagttaatcttttagattctgctgctattcacagtgtaatccaagattttca gcctcatgtggtaatacattgtgcagccgagagaaggccagatattgtagacagtcaaccagatgctgctgctcagctca atgtgactgcttcaggaatcatagcaaaagaagcagctcaagtggaagcatttctgatctacattagtacagactatgta tttgatggcacaaaccctccatacaaggagaacgatgtaccaaatcctctaaatttctatggcagaaccaaactagaagg tgaaagagcagttttaaaaaacaatgaaggtgctgctatccttagaattcctattttatatggagaagttgaaaagctgg aggagagtgctgtgacaattatgtttgataaggtgcaattcaataacaaatcagccaatatggaccactggcagcaaagg tttccaacatatgccaaggatgtagccattgtttgccaacagctggctgagaggagaatggtggatccatccattaaggg aacattccactggtctggtaatgagcagatgacgaagtatgaaatggcacgtgctatggctgatgctttcaatcttccta gtagccacttaagaccaattatagatagcccagtgctgggtgctcctcgtcctaagaatgctcagcttgactgttcccgc cttctgatgttgggcattggtcaccatactccgtttcaagttgggatcaaggaatcactttggcctttcctcactgacaa gagatggagacagacagtgttccactagcttgtagatattttagtgactttaatgtttccaatgcaatttcaaattaaaa aaactgctttagatctgattaaaaaaattctaataaaataaaattttatttttgtttgg |
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Protein
| Protein ID | habu1_s6645_g17281.t1 |
|---|---|
| Definition | - |
>habu1_s6645_g17281.t1 MVGWEKGLRIHFEPGSCWLEEEDVDIPNRRVLITGATGLLGRAVYKEFKANHWHTLGCGYSRARPLFEQVNLLDSAAIHS VIQDFQPHVVIHCAAERRPDIVDSQPDAAAQLNVTASGIIAKEAAQVEAFLIYISTDYVFDGTNPPYKENDVPNPLNFYG RTKLEGERAVLKNNEGAAILRIPILYGEVEKLEESAVTIMFDKVQFNNKSANMDHWQQRFPTYAKDVAIVCQQLAERRMV DPSIKGTFHWSGNEQMTKYEMARAMADAFNLPSSHLRPIIDSPVLGAPRPKNAQLDCSRLLMLGIGHHTPFQVGIKESLW PFLTDKRWRQTVFH |
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