Gene
| Gene Model ID | habu1_s7284_g17883 |
|---|---|
| Locus | habu1_scaffold7284 : 1 ... 28675 : + |
| To GenomeBrowser | habu1_scaffold7284:1..28675 |
| Genes list of scaffold | habu1_scaffold7284 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tyrosine-protein phosphatase non-receptor type partial | EC:3.1.3.16 GO:0004721 GO:0006470 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7284_g17883.t2 | 1 | 1 | Y_phosphatase | 236 | 428 | 0.0 | 178.9 | 0.0 | 0.0 | 178.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s7284_g17883.t2 | gi|704500724|ref|XP_010077840.1| | PREDICTED: tyrosine-protein phosphatase non-receptor type 5 [Pterocles gutturalis] | 0.0 |
| habu1_s7284_g17883.t2 | gi|694830789|ref|XP_009460902.1| | PREDICTED: tyrosine-protein phosphatase non-receptor type 5 [Nipponia nippon] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.6 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 1.7 |
| Nose | 1.5 |
| Brain-1 | 15.4 |
| Eye | 1.8 |
| fetal fibroblast | 0.2 |
| venom gland-2 | 0.4 |
| Brain-2 | 13.4 |
| Spleen | 1.6 |
| Lung | 3.6 |
| Liver | 0.3 |
| Kidney | 0.6 |
| Pancreas | 0.3 |
| Small intestine | 0.2 |
| Large intestine | 1.5 |
| Stomach | 0.8 |
| heart | 0.5 |
| ovary | 1.0 |
| cheek muscle | 3.3 |
Transcript
| Transcript ID | habu1_s7284_g17883.t1 |
|---|---|
| Definition | - |
>habu1_s7284_g17883.t1 gtatttccaagccagcagaaatggaaccactgaatggaacagatggccagccagaaggacaaagcaagacagaaccacct ctgaaaagtgttgaagtgtctccataccatcgctgggtgacctggtggaatgggatgataacagacggaaatctgtatct ctttatcctctcactgttattggttttcttctttatgttttggtgtggtggatgtgagaccatcccagcagttcacgata ttttggctgtcttgtccaaccagtttcatccatcacaacagttggagtcaaattctaacacgaatctgatcagggatgaa ggcatcacagtgtcttacctcctgctgtctctgttcttccttggcttgctactcgtagcaacattggtttggcgtcttgc gaaggctccaccagaaccccaatttcccttccaagaggacaggcgacagtctgtaagccgtcaaccatcgttcacttatt ctgaatggacggaagacaaaaatgatgatgacttccttgatttagatcctgtaccagagtcacctgtttttgactgtgtg atggatataaaagcagaaacagatccaacaactcttacagttaaatctgtagggctgcaggaaaggcgaggttcaaatgt ttcgctcacgttggacatgtgtactcctggatgtactgaacaagggtttggctatatcatgtctcccagggaacagtcag ctcaagaatacctccagacagcatcaaacattctctcagaagaggaactgcacgagaaagctttagattcttttgctctc cagacagaattttttgaaatcccaatgaactttattgatccaaaggaatatgacattccaggtttagtccgaaagaatcg ctacaaaacaattctcccaaatcgtcacagcagagtgtgccttacctcagatgatcaagacgatccccttagctcttaca tcaatgctaattacatcaggggctatagaggagaagaaaaagtgtacattgctactcagggacccatagttaatactgtc agtgatttctggagaatggtatggcaggagcattctccaatcattgtcatgattaccaatatagaagagatgaatgagaa atgtacagagtactggccagaagagcaaattacctatgaaggaattgaaattacagttaacagagtcatacaagcagatg attatcggttaaggcttattaccctaaagaatggcgaagaaacgagaaaactgaagcactactggtatacatcttggcca gaccagaagaccccgggtcacgcaccacccctgctccaactggttcaagaagtggaagaagccatgcattgtgccgaaga aaagaatgccccaatcattgttcattgcagaattgaaccaaagcctgttctcatccagatccttaattgcctccaggccc tggaaaagaatctgaacagcatcatttgggccactcagggcaaagatgtacagctgagtatcatcaacatactgatggta tttaactccatgttgatgaatgtcctcaccagacattaaataggagtggggaaagagtcatgctgtcggaatgtaagagt tcagggctggatctccctcctccctaaccttgactgaatccagtcctgaagatggaaaagaactgcaaaaagttgcttcc tgctctcagcccccctccccaatcaacccaaaagaatattaaaatctatgtggaaccttaattga |
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| Transcript ID | habu1_s7284_g17883.t2 |
| Definition | - |
>habu1_s7284_g17883.t2 atgtgccgtgttacatcaggttttcttctttatgttttggtgtggtggatgtgagaccatcccagcagttcacgatattt tggctgtcttgtccaaccagtttcatccatcacaacagttggagtcaaattctaacacgaatctgatcagggatgaaggc atcacagtgtcttacctcctgctgtctctgttcttccttggcttgctactcgtagcaacattggtttggcgtcttgcgaa ggctccaccagaaccccaatttcccttccaagaggacaggcgacagtctgtaagccgtcaaccatcgttcacttattctg aatggacggaagacaaaaatgatgatgacttccttgatttagatcctgtaccagagtcacctgtttttgactgtgtgatg gatataaaagcagaaacagatccaacaactcttacagttaaatctgtagggctgcaggaaaggcgaggttcaaatgtttc gctcacgttggacatgtgtactcctggatgtactgaacaagggtttggctatatcatgtctcccagggaacagtcagctc aagaatacctccagacagcatcaaacattctctcagaagaggaactgcacgagaaagctttagattcttttgctctccag acagaattttttgaaatcccaatgaactttattgatccaaaggaatatgacattccaggtttagtccgaaagaatcgcta caaaacaattctcccaaatcgtcacagcagagtgtgccttacctcagatgatcaagacgatccccttagctcttacatca atgctaattacatcaggggctatagaggagaagaaaaagtgtacattgctactcagggacccatagttaatactgtcagt gatttctggagaatggtatggcaggagcattctccaatcattgtcatgattaccaatatagaagagatgaatgagaaatg tacagagtactggccagaagagcaaattacctatgaaggaattgaaattacagttaacagagtcatacaagcagatgatt atcggttaaggcttattaccctaaagaatggcgaagaaacgagaaaactgaagcactactggtatacatcttggccagac cagaagaccccgggtcacgcaccacccctgctccaactggttcaagaagtggaagaagccatgcattgtgccgaagaaaa gaatgccccaatcattgttcattgcagaattgaaccaaagcctgttctcatccagatccttaattgcctccaggccctgg aaaagaatctgaacagcatcatttgggccactcagggcaaagatgtacagctgagtatcatcaacatactgatggtattt aactccatgttgatgaatgtcctcaccagacattaaataggagtggggaaagagtcatgctgtcggaatgtaagagttca gggctggatctccctcctccctaaccttgactgaatccagtcctgaagatggaaaagaactgcaaaaagttgcttcctgc tctcagcccccctccccaatcaacccaaaagaatattaaaatctatgtggaaccttaattga |
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Protein
| Protein ID | habu1_s7284_g17883.t1 |
|---|---|
| Definition | - |
>habu1_s7284_g17883.t1 ISKPAEMEPLNGTDGQPEGQSKTEPPLKSVEVSPYHRWVTWWNGMITDGNLYLFILSLLLVFFFMFWCGGCETIPAVHDI LAVLSNQFHPSQQLESNSNTNLIRDEGITVSYLLLSLFFLGLLLVATLVWRLAKAPPEPQFPFQEDRRQSVSRQPSFTYS EWTEDKNDDDFLDLDPVPESPVFDCVMDIKAETDPTTLTVKSVGLQERRGSNVSLTLDMCTPGCTEQGFGYIMSPREQSA QEYLQTASNILSEEELHEKALDSFALQTEFFEIPMNFIDPKEYDIPGLVRKNRYKTILPNRHSRVCLTSDDQDDPLSSYI NANYIRGYRGEEKVYIATQGPIVNTVSDFWRMVWQEHSPIIVMITNIEEMNEKCTEYWPEEQITYEGIEITVNRVIQADD YRLRLITLKNGEETRKLKHYWYTSWPDQKTPGHAPPLLQLVQEVEEAMHCAEEKNAPIIVHCRIEPKPVLIQILNCLQAL EKNLNSIIWATQGKDVQLSIINILMVFNSMLMNVLTRH |
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| Protein ID | habu1_s7284_g17883.t2 |
| Definition | - |
>habu1_s7284_g17883.t2 CAVLHQVFFFMFWCGGCETIPAVHDILAVLSNQFHPSQQLESNSNTNLIRDEGITVSYLLLSLFFLGLLLVATLVWRLAK APPEPQFPFQEDRRQSVSRQPSFTYSEWTEDKNDDDFLDLDPVPESPVFDCVMDIKAETDPTTLTVKSVGLQERRGSNVS LTLDMCTPGCTEQGFGYIMSPREQSAQEYLQTASNILSEEELHEKALDSFALQTEFFEIPMNFIDPKEYDIPGLVRKNRY KTILPNRHSRVCLTSDDQDDPLSSYINANYIRGYRGEEKVYIATQGPIVNTVSDFWRMVWQEHSPIIVMITNIEEMNEKC TEYWPEEQITYEGIEITVNRVIQADDYRLRLITLKNGEETRKLKHYWYTSWPDQKTPGHAPPLLQLVQEVEEAMHCAEEK NAPIIVHCRIEPKPVLIQILNCLQALEKNLNSIIWATQGKDVQLSIINILMVFNSMLMNVLTRH |
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