Gene
| Gene Model ID | habu1_s7284_g17885 |
|---|---|
| Locus | habu1_scaffold7284 : 98582 ... 101795 : - |
| To GenomeBrowser | habu1_scaffold7284:98582..101795 |
| Genes list of scaffold | habu1_scaffold7284 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lysoplasmalogenase-like protein tmem86a | GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7284_g17885.t1 | 1 | 1 | YhhN | 1 | 125 | 6.2e-30 | 103.9 | 4.7e-34 | 7.0e-30 | 103.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s7284_g17885.t1 | gi|602665414|ref|XP_007438293.1| | PREDICTED: lysoplasmalogenase-like protein TMEM86A, partial [Python bivittatus] | 0.0 |
| habu1_s7284_g17885.t1 | gi|327260073|ref|XP_003214860.1| | PREDICTED: lysoplasmalogenase-like protein TMEM86A [Anolis carolinensis] | 0.0 |
| habu1_s7284_g17885.t1 | gi|558210006|ref|XP_006133507.1| | PREDICTED: lysoplasmalogenase-like protein TMEM86A isoform X1 [Pelodiscus sinensis] | 0.0 |
| habu1_s7284_g17885.t1 | gi|530604521|ref|XP_005293997.1| | PREDICTED: lysoplasmalogenase-like protein TMEM86A [Chrysemys picta bellii] | 0.0 |
| habu1_s7284_g17885.t1 | gi|524998128|ref|XP_005046828.1| | PREDICTED: lysoplasmalogenase-like protein TMEM86A [Ficedula albicollis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.4 |
| Venom grand-1 | 0.6 |
| Pit, infrared sensing | 0.2 |
| Nose | 0.2 |
| Brain-1 | 1.6 |
| Eye | 0.3 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.1 |
| Brain-2 | 1.8 |
| Spleen | 0.5 |
| Lung | 0.2 |
| Liver | 0.2 |
| Kidney | 0.2 |
| Pancreas | 1.0 |
| Small intestine | 0.2 |
| Large intestine | 0.3 |
| Stomach | 0.4 |
| heart | 0.4 |
| ovary | 1.4 |
| cheek muscle | 4.2 |
Transcript
| Transcript ID | habu1_s7284_g17885.t1 |
|---|---|
| Definition | - |
>habu1_s7284_g17885.t1 ggggaaaataacttaacatctgcttcttgtttcttctaggtgaagagtgaaggccctaaactcgtgccctttttcaaagc cacctgtgtctactttgtcctctggttgccaacctccagcccttcctggttcagtgccctgatcaagtgtttgccaattt tctgcttatgggtcttcctgctggcacatgggatcaatttcctgacagcccatcacaatgcctgtaggatctttgctggt ttgatattctctgccctgggagatgctttcctcatctggcaagagcagggcttctttgttcacggtgttgaattaataaa ccaagaaacaaatgtgtaatcacaatagatgccagagaacggtagtatttttagtttgtcattcatgcagcccaattatg cttgaagaaatgaagatgtgactttttgtgacatcttttctggcaggagacatcaactgtttttctaagagttacaggct tgttgatgttcggtattacacacatactgtattcctcagcatttggaattaaaccttgggacctgaaagttggccttggg attggcttggtgtccagtttctgctacaccttcctgtattcctacctctcaggcccgtttacctatttggtagctgtcta cattgccttaattggcttcatgggctggcgggctatggctggtgtgcagctttgcaacgacctttggacttggaccaagc tttctgcttgcatcggttccgtgcttttcatggtgtctgacctgactattgctgtcaacaaattctgctttcctgtcccc tactcacgggtcatcatcatggccacttactacgcggctcaaatgctcattgcactttctgcggtggagagcaaggatga agacgttttcaaaaagagaaaatagagactgatgcccgcgcatccaccagctctgtagggcaggggtcctcaaccttggc aactttaagacttgtggacttcaactcccagaattcctcagccagcaaagctggctgaggaattctgggagttaaagtcc acaagtcttaaagttgctaaggttgaggacccttgctgtaggggatgctacagctgcactcatcctggaggatgcttcag aatctgtgactacaagtcttgcttcttggaagcttttctttatagtatttggatgatcttgtctactccagttgattgga gtatggaacacccactggagatttagattgttttagagcacggatgtcaaactcgatcgcctcacatgacgtaacatgat gtatcgcaacgttttttgcctttgtggagccagggtgggcgtggcctatgcatgatgcatccgccccgcggaccacccat ttgacacccctgttttagagtatttacttcctgacccttggaaacctctcttaacacattagtatatttgtataatacag aaactggtgctgaacagtccagtgggacaaagctcgtttcaggacaatattactattaaatagggtaggcaatacactgg aa |
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Protein
| Protein ID | habu1_s7284_g17885.t1 |
|---|---|
| Definition | - |
>habu1_s7284_g17885.t1 MFGITHILYSSAFGIKPWDLKVGLGIGLVSSFCYTFLYSYLSGPFTYLVAVYIALIGFMGWRAMAGVQLCNDLWTWTKLS ACIGSVLFMVSDLTIAVNKFCFPVPYSRVIIMATYYAAQMLIALSAVESKDEDVFKKRK |
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