Gene
| Gene Model ID | habu1_s7284_g17886 |
|---|---|
| Locus | habu1_scaffold7284 : 153286 ... 169770 : + |
| To GenomeBrowser | habu1_scaffold7284:153286..169770 |
| Genes list of scaffold | habu1_scaffold7284 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7284_g17886.t1 | 1 | 1 | SPT2 | 545 | 649 | 5.3e-31 | 107.3 | 3.6e-35 | 5.3e-31 | 107.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s7284_g17886.t1 | gi|602675384|ref|XP_007443172.1| | PREDICTED: protein SPT2 homolog [Python bivittatus] | 0.0 |
| habu1_s7284_g17886.t1 | gi|327260071|ref|XP_003214859.1| | PREDICTED: protein SPT2 homolog [Anolis carolinensis] | 0.0 |
| habu1_s7284_g17886.t1 | gi|641799536|ref|XP_008162730.1| | PREDICTED: LOW QUALITY PROTEIN: protein SPT2 homolog [Chrysemys picta bellii] | 0.0 |
| habu1_s7284_g17886.t1 | gi|591355092|ref|XP_007071853.1| | PREDICTED: protein SPT2 homolog [Chelonia mydas] | 0.0 |
| habu1_s7284_g17886.t1 | gi|529435473|ref|XP_005237510.1| | PREDICTED: protein SPT2 homolog [Falco peregrinus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 8.8 |
| Venom grand-1 | 3.3 |
| Pit, infrared sensing | 5.6 |
| Nose | 4.3 |
| Brain-1 | 3.7 |
| Eye | 5.0 |
| fetal fibroblast | 8.0 |
| venom gland-2 | 8.7 |
| Brain-2 | 3.5 |
| Spleen | 4.8 |
| Lung | 2.8 |
| Liver | 5.3 |
| Kidney | 3.3 |
| Pancreas | 5.7 |
| Small intestine | 3.0 |
| Large intestine | 2.4 |
| Stomach | 3.6 |
| heart | 3.1 |
| ovary | 21.8 |
| cheek muscle | 7.0 |
Transcript
| Transcript ID | habu1_s7284_g17886.t1 |
|---|---|
| Definition | - |
>habu1_s7284_g17886.t1 agggaaagagcctcggagagagcccgtcatggatttccgcgaaatcctcgtgagggcctcggaacagcagggatcgagcg ccgtgccgaagaggtacagtttggcagttggtcctcccaaaaaggatccaaaagttaaaggtgtgcagtcagcagctgtg cgagcctttctcagaaggcaagaagaggaacagaagaaaaaggttcttacagaaaaaagaagaaaagaagacctcctggc taggcgtgtggaaatgaaacatgaccgaaaagccagagctatggcttcgcggacaaaggataattttcatggctataatg gcattcctattgatgagaagcctaaaaagaagcaagcacatgaaagtagaacttctggaagcacagattgtaggacgcag gatgaaatgaacgaagaagattatgatctgtcagagtctgagcaggaaccagaagagtatgaagagaaacgacccaaact ttcagaaaaaccaaaggtgctagccaaaagtgcacctccagcaatgaattttaatgatcttttaaagctggctgaaaaaa aacagtacgagccagttgaaataaaagttctaaaaaagactgaagaaagaccaatgaccgcagaagaattaagagagcga gactacttagagaagagaaacagaaaagagattatactaaaagaaaagaaatcagagaaagaaatgaaacatgcaactgc atcaggttcttccaaaaaggaaatttcccagagggatttagtaaatgctaaagctagcaagcattcaacagacaaaccca ccttttcaaaaggaaacgtcccctcacaatataataaagataagaaaaccaaagggcaaattttaagtgaaaaaccttca aaattggcatctagttccaaagcaagccatgctgaaaaagtaaaatctatacccaaagggcctttaaaaagccctcctca caataatcacaataatcacattaaacctgcacccagtggaggaggaaaaactggatctaagtcccaaactgtagtcttga aaacagctgcaaacggaaccctccgacaatcatctaataaagaacttagtttgaaaaaaaatagcacccatataaaatcg actagtgtggtttctgcccagcaagaaacttataaaaaatccagctccaagcaagcaagcaacatttcagtcacaggagg acctcctgcacgatcaaagagcagcttgaattcaggccccgggcagccaagccgtagtttgattcctgggcatggatcac gtagcatgggacccaggagatcagaaaacagctcaggacaagggcagcaaagcagtagctcaagcacaggacctagactt gccagtaataatttaagcatgggatctagtcgaccaagtattgcttcaagaccagtatgtttaggcagtagccaaggcgt aggacctggtcggccaaattccaatgtaaacactggacctggaagggatagcagctcaggaccaggtcggccaagtatga ctacagctggaactctaaaaccaaagtgtactgttgtatcggaaacaatctcgtccaaaaatctggttccaagacagatg aatggaatgaggccatttcctaatcatagacctgggattcccccacaaggttttccaagaccatctcttccacctattac cagtagctataaaagaaagtttgaagatgaagatgaatatgattctgaaatggaagattttattgatgacgaaggagagc ctcaagaagagatctcgaaacatatcagagagatatttggttatgatcggtcaaaatacagagatgaaagtgattatgcc ttacgttacatggaaagtacttggaaagaacagcagaaagaggaagccagaagcttgagacttggagtgcaagaagatct agaagaacagaaacgtgaagaggaggaattgaaacgcaagaagcaaacaaagaagttgaaaacacattagccaatttgcc acagttttggtttactgttactctactattcgttccaaagtttagctttagttgtacttgcatatgaaagaataagaaat catgtagaaaatggacatatagaaataaggacttggtgccagattttacggtgcaaagttctgcaggccttggagaagga aaatttgggatatgattttctgcttttcctcagcactcagcaccactgcccacactgtgggaatactgggatattttcca ggataattccaggatgggaattagttactgggactgtctcaaaagaggaaattgggagaaaatgttggtctggccttttc cttcagcagaaagtttttattggaacccagtccttatcatgaacagaaatgatttttctgtgctcacagagaggcaactc tggatccaaaattatgttctttagtttgacgctcaaatactgacctttaataactgccaggtttccgcttctgaaacaca aataaatgcactaatggagaatattagttggaataaaaatgaaaattaattatactatg |
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Protein
| Protein ID | habu1_s7284_g17886.t1 |
|---|---|
| Definition | - |
>habu1_s7284_g17886.t1 MDFREILVRASEQQGSSAVPKRYSLAVGPPKKDPKVKGVQSAAVRAFLRRQEEEQKKKVLTEKRRKEDLLARRVEMKHDR KARAMASRTKDNFHGYNGIPIDEKPKKKQAHESRTSGSTDCRTQDEMNEEDYDLSESEQEPEEYEEKRPKLSEKPKVLAK SAPPAMNFNDLLKLAEKKQYEPVEIKVLKKTEERPMTAEELRERDYLEKRNRKEIILKEKKSEKEMKHATASGSSKKEIS QRDLVNAKASKHSTDKPTFSKGNVPSQYNKDKKTKGQILSEKPSKLASSSKASHAEKVKSIPKGPLKSPPHNNHNNHIKP APSGGGKTGSKSQTVVLKTAANGTLRQSSNKELSLKKNSTHIKSTSVVSAQQETYKKSSSKQASNISVTGGPPARSKSSL NSGPGQPSRSLIPGHGSRSMGPRRSENSSGQGQQSSSSSTGPRLASNNLSMGSSRPSIASRPVCLGSSQGVGPGRPNSNV NTGPGRDSSSGPGRPSMTTAGTLKPKCTVVSETISSKNLVPRQMNGMRPFPNHRPGIPPQGFPRPSLPPITSSYKRKFED EDEYDSEMEDFIDDEGEPQEEISKHIREIFGYDRSKYRDESDYALRYMESTWKEQQKEEARSLRLGVQEDLEEQKREEEE LKRKKQTKKLKTH |
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