Gene
| Gene Model ID | habu1_s7284_g17887 |
|---|---|
| Locus | habu1_scaffold7284 : 191896 ... 210417 : + |
| To GenomeBrowser | habu1_scaffold7284:191896..210417 |
| Genes list of scaffold | habu1_scaffold7284 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquitin-conjugating enzyme e2 variant 3 isoform x1 | EC:1.1.1.0 GO:0006464 GO:0015031 GO:0016616 GO:0044262 GO:0055114 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7284_g17887.t1 | 1 | 1 | UEV | 22 | 141 | 2.0e-39 | 134.0 | 8.80015e-43 | 3.3e-39 | 133.3 |
| habu1_s7284_g17887.t1 | 1 | 1 | Ldh_1_N | 184 | 317 | 3.8e-21 | 75.3 | 2.0e-24 | 7.4e-21 | 74.4 |
| habu1_s7284_g17887.t1 | 1 | 1 | Ldh_1_C | 321 | 465 | 1.9e-13 | 50.5 | 2.3e-16 | 8.4e-13 | 48.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s7284_g17887.t1 | gi|602658656|ref|XP_007435029.1| | PREDICTED: ubiquitin-conjugating enzyme E2 variant 3 [Python bivittatus] | 0.0 |
| habu1_s7284_g17887.t1 | gi|327259945|ref|XP_003214796.1| | PREDICTED: ubiquitin-conjugating enzyme E2 variant 3 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s7284_g17887.t1 | gi|637246449|ref|XP_008105836.1| | PREDICTED: ubiquitin-conjugating enzyme E2 variant 3 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s7284_g17887.t1 | gi|719776704|ref|XP_010221026.1| | PREDICTED: ubiquitin-conjugating enzyme E2 variant 3 [Tinamus guttatus] | 0.0 |
| habu1_s7284_g17887.t1 | gi|641799467|ref|XP_005294000.2| | PREDICTED: ubiquitin-conjugating enzyme E2 variant 3 isoform X1 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 11.1 |
| Venom grand-1 | 8.6 |
| Pit, infrared sensing | 8.3 |
| Nose | 9.6 |
| Brain-1 | 1.6 |
| Eye | 4.4 |
| fetal fibroblast | 14.2 |
| venom gland-2 | 8.0 |
| Brain-2 | 1.4 |
| Spleen | 4.1 |
| Lung | 6.6 |
| Liver | 20.3 |
| Kidney | 17.2 |
| Pancreas | 3.7 |
| Small intestine | 8.5 |
| Large intestine | 9.7 |
| Stomach | 4.9 |
| heart | 6.1 |
| ovary | 8.3 |
| cheek muscle | 14.4 |
Transcript
| Transcript ID | habu1_s7284_g17887.t1 |
|---|---|
| Definition | - |
>habu1_s7284_g17887.t1 cctctctctctttggctgagagtaacaggaagcgctgccggcgcctccgaacctgctggcagggcgagccatggagttct cggaggagaagttgcggaagtggctgaacaagtataaattccgagatcttaccatagaagaactgaagcacataaatgag ttgtgtcccaacatcaggttcacaatgagcacctacacttttaaagatggatcccagaaagatcttctgaactttactaa tattgttccagtaaaatatcagggtaacacttacaatattccaatttgcatatggattttggattcttatccttttactc cacccatttgttttctaaaacctactgctaacatgggaatttctgtaggaaaacatgtggatgtccgcggaaggatttac ttgccatatctacaagcctggagccatccacagtcagaaattatagggttgttaaaggaaatgggcataaaatttgaaga agaacttcccttatatgcattatcatcttctgatgaagtcagacagatggacctactttcttatataaccaaaattgttg aaggtgaaaacaatggacagtcaaagggagaagggaagaaaaatgatggagatttacgcaaagttacaatagttggggct ggagatctgggccttgcatgtattttggctatttcagcaaaggatgttgctgacaaggtggttgttttggactgctcaga agctacagtgaaaggaggaacaatggacctagaaatatttgacttgccaaaggtggaaattagtcgagatttttctgtgt cagcggactcaaaattggtggtgcttacagttaattctttaggcaatgctcaatcctatctggaggttgtacagagcaat gtggaattgttcagaggccttattccatcaatagctcattatagtcaacacagtgtactgcttgttgcttctcaaccagt agaaataatgacctatgtgtcgtggaagctgagtggatttcctaaaagcagagttattggaattggttgcaatttggatt cagcaagattccaatatgttgttacaaatctgttgaaagcccaaagcaaaagtaaagacaattggattattggtgaacaa ggagaaaacaaagtggcagcatggaattctaattcagtgataaatcatcctggtgataagttaacaaatgatcaacagat attgactaacagagccatggaaattctgaaaggaaaaggccaaaggtcttggtctgttggtctgtcaatagctgatctga ctgacactatattgaatgataaaaggaaaatacattctgtatcaaccacggtgaaggggtgttataatataaacagtgaa gtatttttaagtatgccttgtgtacttggaatcagtggtgtaattgaaatgatgaagcctgtggaagaagataatgtagt tgaaaaacttcaaaccagtgctgcatctgtcaatgaccttcaacagcaactgaagctctgactaccagggaaccgtagat ttttgttcttaaaatatttgagatttgcagaaaaagtattaccgaccaactgggtccaacatcaaattctcacagtatgg aaacttcagtgaatattattatatggtaactaaagatagataaaaacaattaggttaaggaaggta |
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Protein
| Protein ID | habu1_s7284_g17887.t1 |
|---|---|
| Definition | - |
>habu1_s7284_g17887.t1 MEFSEEKLRKWLNKYKFRDLTIEELKHINELCPNIRFTMSTYTFKDGSQKDLLNFTNIVPVKYQGNTYNIPICIWILDSY PFTPPICFLKPTANMGISVGKHVDVRGRIYLPYLQAWSHPQSEIIGLLKEMGIKFEEELPLYALSSSDEVRQMDLLSYIT KIVEGENNGQSKGEGKKNDGDLRKVTIVGAGDLGLACILAISAKDVADKVVVLDCSEATVKGGTMDLEIFDLPKVEISRD FSVSADSKLVVLTVNSLGNAQSYLEVVQSNVELFRGLIPSIAHYSQHSVLLVASQPVEIMTYVSWKLSGFPKSRVIGIGC NLDSARFQYVVTNLLKAQSKSKDNWIIGEQGENKVAAWNSNSVINHPGDKLTNDQQILTNRAMEILKGKGQRSWSVGLSI ADLTDTILNDKRKIHSVSTTVKGCYNINSEVFLSMPCVLGISGVIEMMKPVEEDNVVEKLQTSAASVNDLQQQLKL |
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