Gene
| Gene Model ID | habu1_s7284_g17889 |
|---|---|
| Locus | habu1_scaffold7284 : 244676 ... 250874 : + |
| To GenomeBrowser | habu1_scaffold7284:244676..250874 |
| Genes list of scaffold | habu1_scaffold7284 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tumor susceptibility partial | GO:0000813 GO:0001558 GO:0003714 GO:0005667 GO:0005730 GO:0005769 GO:0005770 GO:0005886 GO:0006464 GO:0007050 GO:0008285 GO:0015031 GO:0016481 GO:0030216 GO:0031625 GO:0042803 GO:0043162 GO:0045892 GO:0046755 GO:0048306 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7284_g17889.t1 | 1 | 1 | Vps23_core | 70 | 134 | 9.4e-30 | 102.0 | 5.7e-32 | 1.8e-29 | 101.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s7284_g17889.t1 | gi|327259943|ref|XP_003214795.1| | PREDICTED: tumor susceptibility gene 101 protein isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s7284_g17889.t1 | gi|704522730|ref|XP_010083737.1| | PREDICTED: tumor susceptibility gene 101 protein, partial [Pterocles gutturalis] | 0.0 |
| habu1_s7284_g17889.t1 | gi|697464153|ref|XP_009667464.1| | PREDICTED: tumor susceptibility gene 101 protein, partial [Struthio camelus australis] | 0.0 |
| habu1_s7284_g17889.t1 | gi|733888491|ref|XP_010709406.1| | PREDICTED: tumor susceptibility gene 101 protein, partial [Meleagris gallopavo] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 25.8 |
| Venom grand-1 | 40.5 |
| Pit, infrared sensing | 27.3 |
| Nose | 32.5 |
| Brain-1 | 14.0 |
| Eye | 24.7 |
| fetal fibroblast | 30.8 |
| venom gland-2 | 53.7 |
| Brain-2 | 18.7 |
| Spleen | 151.3 |
| Lung | 31.6 |
| Liver | 34.9 |
| Kidney | 29.6 |
| Pancreas | 40.8 |
| Small intestine | 36.9 |
| Large intestine | 32.5 |
| Stomach | 37.5 |
| heart | 40.3 |
| ovary | 53.6 |
| cheek muscle | 32.3 |
Transcript
| Transcript ID | habu1_s7284_g17889.t1 |
|---|---|
| Definition | - |
>habu1_s7284_g17889.t1 gggccgccagtttgacacccctgttctaaagtatgacttttgcaagttagcacaaggtggtattccttttttttcccttt aaagtatgcagaggttatgtctaagggtctgtttgaggacattgatagcagcatttctgtgactatgaattttattctgc aggtcccagcagagatggcacaattagtgaagatactattcgagcttcccttatatcagcagtcagtgataaattgagat ggcggatgaaagaagaaatggatcgcgctcaggcagagctcaatgccttgaagcgcacagaagaggatctgaaaaagggt catcagaagcttgaagagatggtgactcgtctagaccaagaagtggctgaagttgacaaaaacattgatctcctgaagaa gaaagatgaggagctaagttctgccttggaaaaaatggaaagtcagacagaaaacaatgacatagatgaagttattgttc ctacagcaccactttacaaacagatactgaacttgtatgcggaggaaaatgctattgaagataccatcttctatctgggg gaagcactgagacgtggagttatagaccttgacatctttctcaagcatgtccgtctcttgtctcgcaagcaattccagct gagggcgcttatgcagaaagcaagaaagactgcaggactcagtgatctctactaatcgacggcatgaggaagcgtagtgg gggccaaatggtcatattctgagtttcctttgaatatgtaggtggaaaaaaataagttattacatcattcaattgtaaga tattttgaatggataatatatttttctttctcttctttttggtaaggactagctttcatgaattgcactttcaattttct gtaaaccttttacattggtggaccgatggttaaataaaatccattgcatagcctgttttg |
|
Protein
| Protein ID | habu1_s7284_g17889.t1 |
|---|---|
| Definition | - |
>habu1_s7284_g17889.t1 MDRAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNIDLLKKKDEELSSALEKMESQTENNDIDEVIVPTAPLY KQILNLYAEENAIEDTIFYLGEALRRGVIDLDIFLKHVRLLSRKQFQLRALMQKARKTAGLSDLY |
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