Gene
| Gene Model ID | habu1_s7284_g17891 |
|---|---|
| Locus | habu1_scaffold7284 : 282475 ... 302445 : - |
| To GenomeBrowser | habu1_scaffold7284:282475..302445 |
| Genes list of scaffold | habu1_scaffold7284 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| general transcription factor iih subunit 1 | GO:0000439 GO:0006289 GO:0006351 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s7284_g17891.t3 | 1 | 1 | TFIIH_BTF_p62_N | 10 | 81 | 1.3e-21 | 75.9 | 3.1e-25 | 2.3e-21 | 75.2 |
| habu1_s7284_g17891.t3 | 2 | 1 | BSD | 104 | 149 | 1.9e-28 | 98.0 | 1.6e-14 | 1.2e-10 | 40.9 |
| habu1_s7284_g17891.t3 | 2 | 2 | BSD | 178 | 235 | 1.9e-28 | 98.0 | 8.5e-19 | 6.3e-15 | 54.6 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 10.1 |
| Venom grand-1 | 9.0 |
| Pit, infrared sensing | 9.4 |
| Nose | 10.0 |
| Brain-1 | 10.1 |
| Eye | 10.4 |
| fetal fibroblast | 24.9 |
| venom gland-2 | 17.0 |
| Brain-2 | 8.4 |
| Spleen | 11.2 |
| Lung | 9.5 |
| Liver | 13.7 |
| Kidney | 16.8 |
| Pancreas | 19.5 |
| Small intestine | 15.3 |
| Large intestine | 10.4 |
| Stomach | 12.4 |
| heart | 8.1 |
| ovary | 85.7 |
| cheek muscle | 13.2 |
Transcript
| Transcript ID | habu1_s7284_g17891.t1 |
|---|---|
| Definition | - |
>habu1_s7284_g17891.t1 ggtgagagcacaaacacagtagtcaccctaacgtcatcatggcaacatcatccgaagaagtgttattaatagtgaagaaa gtgcgtcaaaagaaacaggatggggctctttatctcatggctgaaagaatagcttgggcacctgatggcaaagaccggtt cacgatcagccatatgtatgcagatataaaatgtcagaaaatcagtcctgaaggaaaagctaagattcagcttcaattgg tattgcatgcaggagacacaactaacttccatttttctaatgaaagtacagcagtaaaagaacgtgatgcagttaaagat cttcttcagcagctgctaccaaagttcaagaggaaagccaataaggaactagaggaaaaaaaccgaatgctgcaagaaga tcctgttttgtttcagctttataaagatcttgttgtaagtcaggtgattagtgctgaggaattctgggccaaccgtttaa atatgaatgcttcggataattcggcagcacctagcaagcaagatgttggcatttctgctgcttttctggctgatgttaga cctcaaacagatggatgcaatggactaagatataatttgacttcagatatcattgaatcaatatttaggacttatccagc agtaaaacttaaatatgcagaaaatgttccacacaatatgacagaaaaagaattctggactcgattcttccagtctcact attttcatagagatagattgaatgcaggatcaaaggacctttttgcagaatgtgccaaaatggatgaaaaggggttaaaa gcaatggtctgtcaaggagtgaaaaatcctttattagatttaactgccttggaagataaatcattggatgaaggttacgg tatttccttggcaccatccacatccaactctacaaaatcaataaaggaaagtagcaacgcggctattataaaacgcttta accatcatagtgccatggtccttgcagctgggctcagaaaaccagaagcacaaaatgatcactatagtgagaccaacagt atggatggaaactctagagattcagatatctttcagccaccagtaaaaaaggtaaagctgcaagaatctattgaatatga agatttagaaaacaacaacagcattaaaactattgcactaaatctaaaaaaatcagataggtattaccatggtccaacac caattcagtcacagcaatatgcaacgagccatgatattattaattctttgtgtagtattagagacgaaatggaaggctat gtacccaaattaactcaggttctctcaagtggtgctgccagtagtactatctcagccctgtcacctggaggagcacttat gcagagtggaacacagcaagccataaatctgggagagttactacgacacttctggtcctgttttcctgttaatacaccat tcctggaagaaaaagttataaaaatgcggagtaatttggaaagatttcaagttacaaaactctgcccattccaagagaaa attcgaaagcagtatttaagcacaaatgtaagaaaaagccattcttttctttaatatgtataagattagtaaattgcttt gttcataaataaatcagccaatcttaatggttact |
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| Transcript ID | habu1_s7284_g17891.t2 |
| Definition | - |
>habu1_s7284_g17891.t2 ggtgagagcacaaacacagtagtcaccctaacgtcatcatggcaacatcatccgaagaagtgttattaatagtgaagaaa gtgcgtcaaaagaaacaggatggggctctttatctcatggctgaaagaatagcttgggcacctgatggcaaagaccggtt cacgatcagccatatgtatgcagatataaaatgtcagaaaatcagtcctgaaggaaaagctaagattcagcttcaattgg tattgcatgcaggagacacaactaacttccatttttctaatgaaagtacagcagtaaaagaacgtgatgcagttaaagat cttcttcagcagctgctaccaaagttcaagaggaaagccaataaggaactagaggaaaaaaaccgaatgctgcaagaaga tcctgttttgtttcagctttataaagatcttgttgtaagtcaggtgattagtgctgaggaattctgggccaaccgtttaa atatgaatgcttcggataattcggcagcacctagcaagcaagatgttggcatttctgctgcttttctggctgatgttaga cctcaaacagatggatgcaatggactaagatataatttgacttcagatatcattgaatcaatatttaggacttatccagc agtaaaacttaaatatgcagaaaatgttccacacaatatgacagaaaaagaattctggactcgattcttccagtctcact attttcatagagatagattgaatgcaggatcaaaggacctttttgcagaatgtgccaaaatggatgaaaaggggttaaaa gcaatggtctgtcaaggagtgaaaaatcctttattagatttaactgccttggaagataaatcattggatgaaggttacgg tatttccttggcaccatccacatccaactctacaaaatcaataaaggaaagtagcaacgcggctattataaaacgcttta accatcatagtgccatggtccttgcagctgggctcagaaaaccagaagcacaaaatgatcactatagtgagaccaacagt atggatggaaactctagagattcagatatctttcagccaccagtaaaaaaggtaaagctgcaagaatctattgaatatga agatttagaaaacaacaacagcattaaaactattgcactaaatctaaaaaaatcagataggtattaccatggtccaacac caattcagtcacagcaatatgcaacgagccatgatattattaattctttgtgtagtattagagacgaaatggaaggctat gtacccaaattaactcaggttctctcaagtggtgctgccagtagtactatctcagccctgtcacctggaggagcacttat gcagagtggaacacagcaagccataaatcagatgttgccaaatgatgttcagtctgaactgaagcacttatatgttgcag tgggagagttactacgacacttctggtcctgttttcctgttaatacaccattcctggaagaaaaagttataaaaatgcgg agtaatttggaaagatttcaagttacaaaactctgcccattccaagagaaaattcgaaagcagtatttaagcacaaatgt aagaaaaagccattcttttctttaatatgtataagattagtaaattgctttgttcataaataaatcagccaatcttaatg gttact |
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| Transcript ID | habu1_s7284_g17891.t3 |
| Definition | - |
>habu1_s7284_g17891.t3 ggtgagagcacaaacacagtagtcaccctaacggactatgtttattcatgaatcaactcatatattagatagacattctt tgtcttaattataggtcataccatcttttgaatgtgtgtgtgtgtgtgtttaaaaagtcatcatggcaacatcatccgaa gaagtgttattaatagtgaagaaagtgcgtcaaaagaaacaggatggggctctttatctcatggctgaaagaatagcttg ggcacctgatggcaaagaccggttcacgatcagccatatgtatgcagatataaaatgtcagaaaatcagtcctgaaggaa aagctaagattcagcttcaattggtattgcatgcaggagacacaactaacttccatttttctaatgaaagtacagcagta aaagaacgtgatgcagttaaagatcttcttcagcagctgctaccaaagttcaagaggaaagccaataaggaactagagga aaaaaaccgaatgctgcaagaagatcctgttttgtttcagctttataaagatcttgttgtaagtcaggtgattagtgctg aggaattctgggccaaccgtttaaatatgaatgcttcggataattcggcagcacctagcaagcaagatgttggcatttct gctgcttttctggctgatgttagacctcaaacagatggatgcaatggactaagatataatttgacttcagatatcattga atcaatatttaggacttatccagcagtaaaacttaaatatgcagaaaatgttccacacaatatgacagaaaaagaattct ggactcgattcttccagtctcactattttcatagagatagattgaatgcaggatcaaaggacctttttgcagaatgtgcc aaaatggatgaaaaggggttaaaagcaatggtctgtcaaggagtgaaaaatcctttattagatttaactgccttggaaga taaatcattggatgaaggttacggtatttccttggcaccatccacatccaactctacaaaatcaataaaggaaagtagca acgcggctattataaaacgctttaaccatcatagtgccatggtccttgcagctgggctcagaaaaccagaagcacaaaat gatcactatagtgagaccaacagtatggatggaaactctagagattcagatatctttcagccaccagtaaaaaaggtaaa gctgcaagaatctattgaatatgaagatttagaaaacaacaacagcattaaaactattgcactaaatctaaaaaaatcag ataggtattaccatggtccaacaccaattcagtcacagcaatatgcaacgagccatgatattattaattctttgtgtagt attagagacgaaatggaaggctatgtacccaaattaactcaggttctctcaagtggtgctgccagtagtactatctcagc cctgtcacctggaggagcacttatgcagagtggaacacagcaagccataaatcagatgttgccaaatgatgttcagtctg aactgaagcacttatatgttgcagtgggagagttactacgacacttctggtcctgttttcctgttaatacaccattcctg gaagaaaaagttataaaaatgcggagtaatttggaaagatttcaagttacaaaactctgcccattccaagagaaaattcg aaagcagtatttaagcacaaatgtaagaaaaagccattcttttctttaatatgtataagattagtaaattgctttgttca taaataaatcagccaatcttaatggttact |
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Protein
| Protein ID | habu1_s7284_g17891.t1 |
|---|---|
| Definition | - |
>habu1_s7284_g17891.t1 MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPDGKDRFTISHMYADIKCQKISPEGKAKIQLQLVLHAGDTTNFHFS NESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLNMNASDNSAAPSK QDVGISAAFLADVRPQTDGCNGLRYNLTSDIIESIFRTYPAVKLKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNAGSKD LFAECAKMDEKGLKAMVCQGVKNPLLDLTALEDKSLDEGYGISLAPSTSNSTKSIKESSNAAIIKRFNHHSAMVLAAGLR KPEAQNDHYSETNSMDGNSRDSDIFQPPVKKVKLQESIEYEDLENNNSIKTIALNLKKSDRYYHGPTPIQSQQYATSHDI INSLCSIRDEMEGYVPKLTQVLSSGAASSTISALSPGGALMQSGTQQAINLGELLRHFWSCFPVNTPFLEEKVIKMRSNL ERFQVTKLCPFQEKIRKQYLSTNVRKSHSFL |
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| Protein ID | habu1_s7284_g17891.t2 |
| Definition | - |
>habu1_s7284_g17891.t2 MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPDGKDRFTISHMYADIKCQKISPEGKAKIQLQLVLHAGDTTNFHFS NESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLNMNASDNSAAPSK QDVGISAAFLADVRPQTDGCNGLRYNLTSDIIESIFRTYPAVKLKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNAGSKD LFAECAKMDEKGLKAMVCQGVKNPLLDLTALEDKSLDEGYGISLAPSTSNSTKSIKESSNAAIIKRFNHHSAMVLAAGLR KPEAQNDHYSETNSMDGNSRDSDIFQPPVKKVKLQESIEYEDLENNNSIKTIALNLKKSDRYYHGPTPIQSQQYATSHDI INSLCSIRDEMEGYVPKLTQVLSSGAASSTISALSPGGALMQSGTQQAINQMLPNDVQSELKHLYVAVGELLRHFWSCFP VNTPFLEEKVIKMRSNLERFQVTKLCPFQEKIRKQYLSTNVRKSHSFL |
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| Protein ID | habu1_s7284_g17891.t3 |
| Definition | - |
>habu1_s7284_g17891.t3 MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPDGKDRFTISHMYADIKCQKISPEGKAKIQLQLVLHAGDTTNFHFS NESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLNMNASDNSAAPSK QDVGISAAFLADVRPQTDGCNGLRYNLTSDIIESIFRTYPAVKLKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNAGSKD LFAECAKMDEKGLKAMVCQGVKNPLLDLTALEDKSLDEGYGISLAPSTSNSTKSIKESSNAAIIKRFNHHSAMVLAAGLR KPEAQNDHYSETNSMDGNSRDSDIFQPPVKKVKLQESIEYEDLENNNSIKTIALNLKKSDRYYHGPTPIQSQQYATSHDI INSLCSIRDEMEGYVPKLTQVLSSGAASSTISALSPGGALMQSGTQQAINQMLPNDVQSELKHLYVAVGELLRHFWSCFP VNTPFLEEKVIKMRSNLERFQVTKLCPFQEKIRKQYLSTNVRKSHSFL |
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